co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G08180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000494: box C/D snoRNA 3'-end processing	0.00E+00
2	GO:0043461: proton-transporting ATP synthase complex assembly	0.00E+00
3	GO:0090069: regulation of ribosome biogenesis	0.00E+00
4	GO:1990258: histone glutamine methylation	0.00E+00
5	GO:0006364: rRNA processing	7.48E-10
6	GO:0000027: ribosomal large subunit assembly	1.07E-07
7	GO:0031167: rRNA methylation	5.53E-07
8	GO:0001510: RNA methylation	3.22E-06
9	GO:0006430: lysyl-tRNA aminoacylation	1.39E-05
10	GO:2000232: regulation of rRNA processing	1.39E-05
11	GO:0006412: translation	2.00E-05
12	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.65E-05
13	GO:0008033: tRNA processing	4.04E-05
14	GO:0010197: polar nucleus fusion	4.41E-05
15	GO:0042254: ribosome biogenesis	6.40E-05
16	GO:1902626: assembly of large subunit precursor of preribosome	6.55E-05
17	GO:0009855: determination of bilateral symmetry	9.94E-05
18	GO:0042273: ribosomal large subunit biogenesis	1.37E-04
19	GO:0071493: cellular response to UV-B	1.78E-04
20	GO:0000741: karyogamy	2.22E-04
21	GO:0009423: chorismate biosynthetic process	2.68E-04
22	GO:0080186: developmental vegetative growth	3.15E-04
23	GO:0009553: embryo sac development	3.70E-04
24	GO:0007338: single fertilization	4.68E-04
25	GO:0016573: histone acetylation	5.23E-04
26	GO:0010162: seed dormancy process	5.78E-04
27	GO:0009073: aromatic amino acid family biosynthetic process	6.34E-04
28	GO:0006626: protein targeting to mitochondrion	7.52E-04
29	GO:0048467: gynoecium development	8.13E-04
30	GO:0009944: polarity specification of adaxial/abaxial axis	1.00E-03
31	GO:0007005: mitochondrion organization	1.20E-03
32	GO:0009294: DNA mediated transformation	1.27E-03
33	GO:0009960: endosperm development	1.56E-03
34	GO:0032502: developmental process	1.88E-03
35	GO:0009567: double fertilization forming a zygote and endosperm	2.04E-03
36	GO:0009793: embryo development ending in seed dormancy	2.25E-03
37	GO:0006839: mitochondrial transport	3.52E-03
38	GO:0016569: covalent chromatin modification	5.74E-03
39	GO:0015031: protein transport	7.82E-03
40	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.23E-02
41	GO:0009734: auxin-activated signaling pathway	2.33E-02
42	GO:0009555: pollen development	2.74E-02
43	GO:0006414: translational elongation	3.65E-02
44	GO:0006351: transcription, DNA-templated	4.10E-02

Rank	GO Term	Adjusted P value
1	GO:1990259: histone-glutamine methyltransferase activity	0.00E+00
2	GO:0004107: chorismate synthase activity	0.00E+00
3	GO:0030515: snoRNA binding	3.27E-09
4	GO:0008649: rRNA methyltransferase activity	6.63E-08
5	GO:0003735: structural constituent of ribosome	1.27E-06
6	GO:0003723: RNA binding	5.20E-06
7	GO:0042134: rRNA primary transcript binding	1.39E-05
8	GO:0004824: lysine-tRNA ligase activity	1.39E-05
9	GO:0001055: RNA polymerase II activity	5.23E-04
10	GO:0001054: RNA polymerase I activity	6.34E-04
11	GO:0001056: RNA polymerase III activity	6.93E-04
12	GO:0015114: phosphate ion transmembrane transporter activity	7.52E-04
13	GO:0004407: histone deacetylase activity	1.00E-03
14	GO:0003713: transcription coactivator activity	1.56E-03
15	GO:0010181: FMN binding	1.64E-03
16	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.75E-03
17	GO:0050897: cobalt ion binding	3.03E-03
18	GO:0003746: translation elongation factor activity	3.22E-03
19	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.69E-03
20	GO:0019843: rRNA binding	6.99E-03
21	GO:0003729: mRNA binding	9.16E-03
22	GO:0005515: protein binding	1.43E-02
23	GO:0003924: GTPase activity	1.82E-02
24	GO:0046872: metal ion binding	2.19E-02
25	GO:0000166: nucleotide binding	2.74E-02
26	GO:0005525: GTP binding	3.91E-02

Rank	GO Term	Adjusted P value
1	GO:0034457: Mpp10 complex	0.00E+00
2	GO:0005730: nucleolus	7.13E-15
3	GO:0015030: Cajal body	1.53E-08
4	GO:0032040: small-subunit processome	3.57E-08
5	GO:0031428: box C/D snoRNP complex	8.71E-07
6	GO:0005840: ribosome	5.01E-06
7	GO:0035267: NuA4 histone acetyltransferase complex	3.65E-05
8	GO:0070545: PeBoW complex	3.65E-05
9	GO:0022625: cytosolic large ribosomal subunit	9.25E-05
10	GO:0016363: nuclear matrix	2.68E-04
11	GO:0005742: mitochondrial outer membrane translocase complex	4.16E-04
12	GO:0005736: DNA-directed RNA polymerase I complex	4.68E-04
13	GO:0005666: DNA-directed RNA polymerase III complex	5.23E-04
14	GO:0000418: DNA-directed RNA polymerase IV complex	5.78E-04
15	GO:0005774: vacuolar membrane	6.27E-04
16	GO:0005665: DNA-directed RNA polymerase II, core complex	6.93E-04
17	GO:0019013: viral nucleocapsid	7.52E-04
18	GO:0022627: cytosolic small ribosomal subunit	8.45E-04
19	GO:0005758: mitochondrial intermembrane space	1.00E-03
20	GO:0005743: mitochondrial inner membrane	1.63E-03
21	GO:0016592: mediator complex	1.88E-03
22	GO:0022626: cytosolic ribosome	2.93E-03
23	GO:0015934: large ribosomal subunit	3.03E-03
24	GO:0005747: mitochondrial respiratory chain complex I	5.38E-03
25	GO:0005834: heterotrimeric G-protein complex	5.50E-03
26	GO:0005732: small nucleolar ribonucleoprotein complex	6.35E-03
27	GO:0005654: nucleoplasm	6.86E-03
28	GO:0005739: mitochondrion	1.22E-02
29	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.27E-02
30	GO:0005829: cytosol	1.39E-02
31	GO:0009506: plasmodesma	2.05E-02
32	GO:0005618: cell wall	2.45E-02
33	GO:0005773: vacuole	3.29E-02
34	GO:0005622: intracellular	4.13E-02
35	GO:0009507: chloroplast	4.87E-02