Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G07340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030149: sphingolipid catabolic process0.00E+00
2GO:0006793: phosphorus metabolic process0.00E+00
3GO:0048227: plasma membrane to endosome transport0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0006592: ornithine biosynthetic process0.00E+00
6GO:0042430: indole-containing compound metabolic process0.00E+00
7GO:0002376: immune system process0.00E+00
8GO:0034976: response to endoplasmic reticulum stress2.86E-06
9GO:0042742: defense response to bacterium3.24E-06
10GO:0006952: defense response4.94E-06
11GO:0009617: response to bacterium4.99E-05
12GO:0009697: salicylic acid biosynthetic process8.85E-05
13GO:0046686: response to cadmium ion1.07E-04
14GO:0045454: cell redox homeostasis2.39E-04
15GO:0010150: leaf senescence2.49E-04
16GO:0044376: RNA polymerase II complex import to nucleus2.92E-04
17GO:0009700: indole phytoalexin biosynthetic process2.92E-04
18GO:0010265: SCF complex assembly2.92E-04
19GO:0010230: alternative respiration2.92E-04
20GO:0046244: salicylic acid catabolic process2.92E-04
21GO:0080120: CAAX-box protein maturation2.92E-04
22GO:0034975: protein folding in endoplasmic reticulum2.92E-04
23GO:0071586: CAAX-box protein processing2.92E-04
24GO:1990641: response to iron ion starvation2.92E-04
25GO:0010482: regulation of epidermal cell division2.92E-04
26GO:1990022: RNA polymerase III complex localization to nucleus2.92E-04
27GO:0009737: response to abscisic acid2.96E-04
28GO:0006468: protein phosphorylation3.11E-04
29GO:0010120: camalexin biosynthetic process3.57E-04
30GO:0000302: response to reactive oxygen species3.69E-04
31GO:0010112: regulation of systemic acquired resistance4.30E-04
32GO:0009615: response to virus5.95E-04
33GO:0015865: purine nucleotide transport6.40E-04
34GO:0019752: carboxylic acid metabolic process6.40E-04
35GO:1902000: homogentisate catabolic process6.40E-04
36GO:0019441: tryptophan catabolic process to kynurenine6.40E-04
37GO:0006996: organelle organization6.40E-04
38GO:0051592: response to calcium ion6.40E-04
39GO:0015914: phospholipid transport6.40E-04
40GO:0006101: citrate metabolic process6.40E-04
41GO:0009627: systemic acquired resistance6.84E-04
42GO:0009407: toxin catabolic process9.39E-04
43GO:0002237: response to molecule of bacterial origin9.97E-04
44GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening1.04E-03
45GO:0010359: regulation of anion channel activity1.04E-03
46GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.04E-03
47GO:0002230: positive regulation of defense response to virus by host1.04E-03
48GO:0010351: lithium ion transport1.04E-03
49GO:0009410: response to xenobiotic stimulus1.04E-03
50GO:0010272: response to silver ion1.04E-03
51GO:0009072: aromatic amino acid family metabolic process1.04E-03
52GO:1902290: positive regulation of defense response to oomycetes1.48E-03
53GO:0006882: cellular zinc ion homeostasis1.48E-03
54GO:0001676: long-chain fatty acid metabolic process1.48E-03
55GO:0010116: positive regulation of abscisic acid biosynthetic process1.48E-03
56GO:0019438: aromatic compound biosynthetic process1.48E-03
57GO:0048194: Golgi vesicle budding1.48E-03
58GO:0034219: carbohydrate transmembrane transport1.48E-03
59GO:0002239: response to oomycetes1.48E-03
60GO:0033014: tetrapyrrole biosynthetic process1.48E-03
61GO:0046902: regulation of mitochondrial membrane permeability1.48E-03
62GO:0006874: cellular calcium ion homeostasis1.51E-03
63GO:0009636: response to toxic substance1.78E-03
64GO:0030433: ubiquitin-dependent ERAD pathway1.81E-03
65GO:0071456: cellular response to hypoxia1.81E-03
66GO:0009814: defense response, incompatible interaction1.81E-03
67GO:0009625: response to insect1.98E-03
68GO:0051567: histone H3-K9 methylation1.99E-03
69GO:0080142: regulation of salicylic acid biosynthetic process1.99E-03
70GO:0055114: oxidation-reduction process2.25E-03
71GO:0006097: glyoxylate cycle2.54E-03
72GO:0016094: polyprenol biosynthetic process2.54E-03
73GO:0030308: negative regulation of cell growth2.54E-03
74GO:0018258: protein O-linked glycosylation via hydroxyproline3.14E-03
75GO:0035435: phosphate ion transmembrane transport3.14E-03
76GO:0002238: response to molecule of fungal origin3.14E-03
77GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.14E-03
78GO:0010405: arabinogalactan protein metabolic process3.14E-03
79GO:1902456: regulation of stomatal opening3.14E-03
80GO:0009624: response to nematode3.51E-03
81GO:0018105: peptidyl-serine phosphorylation3.64E-03
82GO:0009612: response to mechanical stimulus3.77E-03
83GO:0098655: cation transmembrane transport3.77E-03
84GO:0010555: response to mannitol3.77E-03
85GO:2000067: regulation of root morphogenesis3.77E-03
86GO:0000911: cytokinesis by cell plate formation3.77E-03
87GO:0030163: protein catabolic process3.80E-03
88GO:0044550: secondary metabolite biosynthetic process4.20E-03
89GO:0030026: cellular manganese ion homeostasis4.45E-03
90GO:1900057: positive regulation of leaf senescence4.45E-03
91GO:1902074: response to salt4.45E-03
92GO:0006744: ubiquinone biosynthetic process4.45E-03
93GO:1900056: negative regulation of leaf senescence4.45E-03
94GO:0006979: response to oxidative stress4.86E-03
95GO:0009816: defense response to bacterium, incompatible interaction5.10E-03
96GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.17E-03
97GO:0009819: drought recovery5.17E-03
98GO:0043068: positive regulation of programmed cell death5.17E-03
99GO:0006605: protein targeting5.17E-03
100GO:0031540: regulation of anthocyanin biosynthetic process5.17E-03
101GO:0006102: isocitrate metabolic process5.17E-03
102GO:0009790: embryo development5.69E-03
103GO:0007186: G-protein coupled receptor signaling pathway5.92E-03
104GO:0006526: arginine biosynthetic process5.92E-03
105GO:0030968: endoplasmic reticulum unfolded protein response5.92E-03
106GO:0043562: cellular response to nitrogen levels5.92E-03
107GO:0017004: cytochrome complex assembly5.92E-03
108GO:0009699: phenylpropanoid biosynthetic process5.92E-03
109GO:0015996: chlorophyll catabolic process5.92E-03
110GO:0009751: response to salicylic acid6.54E-03
111GO:0006783: heme biosynthetic process6.71E-03
112GO:0046685: response to arsenic-containing substance6.71E-03
113GO:0009821: alkaloid biosynthetic process6.71E-03
114GO:0051865: protein autoubiquitination6.71E-03
115GO:0048354: mucilage biosynthetic process involved in seed coat development7.54E-03
116GO:1900426: positive regulation of defense response to bacterium7.54E-03
117GO:0010205: photoinhibition7.54E-03
118GO:0043067: regulation of programmed cell death7.54E-03
119GO:0030042: actin filament depolymerization7.54E-03
120GO:0015031: protein transport7.66E-03
121GO:0006896: Golgi to vacuole transport8.40E-03
122GO:0006032: chitin catabolic process8.40E-03
123GO:0043069: negative regulation of programmed cell death8.40E-03
124GO:0055062: phosphate ion homeostasis8.40E-03
125GO:0007064: mitotic sister chromatid cohesion8.40E-03
126GO:0009682: induced systemic resistance9.30E-03
127GO:0015770: sucrose transport9.30E-03
128GO:0000272: polysaccharide catabolic process9.30E-03
129GO:0009750: response to fructose9.30E-03
130GO:0048765: root hair cell differentiation9.30E-03
131GO:0030148: sphingolipid biosynthetic process9.30E-03
132GO:0006631: fatty acid metabolic process9.49E-03
133GO:0000266: mitochondrial fission1.02E-02
134GO:0006790: sulfur compound metabolic process1.02E-02
135GO:0012501: programmed cell death1.02E-02
136GO:0015706: nitrate transport1.02E-02
137GO:0051707: response to other organism1.03E-02
138GO:0006626: protein targeting to mitochondrion1.12E-02
139GO:0009846: pollen germination1.30E-02
140GO:0010167: response to nitrate1.32E-02
141GO:0005985: sucrose metabolic process1.32E-02
142GO:0070588: calcium ion transmembrane transport1.32E-02
143GO:0046854: phosphatidylinositol phosphorylation1.32E-02
144GO:0042343: indole glucosinolate metabolic process1.32E-02
145GO:0006486: protein glycosylation1.39E-02
146GO:0010224: response to UV-B1.44E-02
147GO:0009738: abscisic acid-activated signaling pathway1.52E-02
148GO:0080147: root hair cell development1.54E-02
149GO:0000027: ribosomal large subunit assembly1.54E-02
150GO:0009863: salicylic acid mediated signaling pathway1.54E-02
151GO:2000377: regulation of reactive oxygen species metabolic process1.54E-02
152GO:0010026: trichome differentiation1.65E-02
153GO:0009695: jasmonic acid biosynthetic process1.65E-02
154GO:0006096: glycolytic process1.65E-02
155GO:0010200: response to chitin1.69E-02
156GO:0016192: vesicle-mediated transport1.72E-02
157GO:0016998: cell wall macromolecule catabolic process1.76E-02
158GO:0015992: proton transport1.76E-02
159GO:0098542: defense response to other organism1.76E-02
160GO:0031408: oxylipin biosynthetic process1.76E-02
161GO:0046777: protein autophosphorylation1.76E-02
162GO:0009620: response to fungus1.81E-02
163GO:0031348: negative regulation of defense response1.88E-02
164GO:0019748: secondary metabolic process1.88E-02
165GO:0009651: response to salt stress1.98E-02
166GO:0006012: galactose metabolic process2.00E-02
167GO:0006886: intracellular protein transport2.11E-02
168GO:0009306: protein secretion2.12E-02
169GO:0006457: protein folding2.34E-02
170GO:0042391: regulation of membrane potential2.37E-02
171GO:0010087: phloem or xylem histogenesis2.37E-02
172GO:0042631: cellular response to water deprivation2.37E-02
173GO:0006520: cellular amino acid metabolic process2.50E-02
174GO:0006511: ubiquitin-dependent protein catabolic process2.51E-02
175GO:0061025: membrane fusion2.64E-02
176GO:0006814: sodium ion transport2.64E-02
177GO:0042752: regulation of circadian rhythm2.64E-02
178GO:0009646: response to absence of light2.64E-02
179GO:0009749: response to glucose2.77E-02
180GO:0006623: protein targeting to vacuole2.77E-02
181GO:0002229: defense response to oomycetes2.91E-02
182GO:0010193: response to ozone2.91E-02
183GO:0007264: small GTPase mediated signal transduction3.05E-02
184GO:0006464: cellular protein modification process3.34E-02
185GO:0016579: protein deubiquitination3.63E-02
186GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.84E-02
187GO:0007166: cell surface receptor signaling pathway3.92E-02
188GO:0009607: response to biotic stimulus3.93E-02
189GO:0006508: proteolysis4.07E-02
190GO:0042128: nitrate assimilation4.09E-02
191GO:0015995: chlorophyll biosynthetic process4.25E-02
192GO:0016311: dephosphorylation4.41E-02
193GO:0008219: cell death4.57E-02
194GO:0006499: N-terminal protein myristoylation4.89E-02
RankGO TermAdjusted P value
1GO:0050220: prostaglandin-E synthase activity0.00E+00
2GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0008777: acetylornithine deacetylase activity0.00E+00
5GO:0016034: maleylacetoacetate isomerase activity0.00E+00
6GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
7GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
8GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
9GO:0051670: inulinase activity0.00E+00
10GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
11GO:0003756: protein disulfide isomerase activity2.71E-07
12GO:0005516: calmodulin binding3.99E-05
13GO:0004683: calmodulin-dependent protein kinase activity7.28E-05
14GO:0004674: protein serine/threonine kinase activity1.58E-04
15GO:0102391: decanoate--CoA ligase activity1.76E-04
16GO:0016301: kinase activity1.78E-04
17GO:0004364: glutathione transferase activity1.97E-04
18GO:0008320: protein transmembrane transporter activity2.30E-04
19GO:0004467: long-chain fatty acid-CoA ligase activity2.30E-04
20GO:0004321: fatty-acyl-CoA synthase activity2.92E-04
21GO:0004325: ferrochelatase activity2.92E-04
22GO:0031219: levanase activity2.92E-04
23GO:2001147: camalexin binding2.92E-04
24GO:2001227: quercitrin binding2.92E-04
25GO:0051669: fructan beta-fructosidase activity2.92E-04
26GO:0005524: ATP binding3.06E-04
27GO:0045140: inositol phosphoceramide synthase activity6.40E-04
28GO:0004061: arylformamidase activity6.40E-04
29GO:0043141: ATP-dependent 5'-3' DNA helicase activity6.40E-04
30GO:0015036: disulfide oxidoreductase activity6.40E-04
31GO:0050736: O-malonyltransferase activity6.40E-04
32GO:0004634: phosphopyruvate hydratase activity6.40E-04
33GO:0003994: aconitate hydratase activity6.40E-04
34GO:0009931: calcium-dependent protein serine/threonine kinase activity6.84E-04
35GO:0031683: G-protein beta/gamma-subunit complex binding1.04E-03
36GO:0016805: dipeptidase activity1.04E-03
37GO:0001664: G-protein coupled receptor binding1.04E-03
38GO:0005093: Rab GDP-dissociation inhibitor activity1.04E-03
39GO:0008430: selenium binding1.04E-03
40GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.04E-03
41GO:0004190: aspartic-type endopeptidase activity1.11E-03
42GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.12E-03
43GO:0005509: calcium ion binding1.22E-03
44GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.28E-03
45GO:0015368: calcium:cation antiporter activity1.99E-03
46GO:0015369: calcium:proton antiporter activity1.99E-03
47GO:0004040: amidase activity2.54E-03
48GO:0005496: steroid binding2.54E-03
49GO:0005471: ATP:ADP antiporter activity2.54E-03
50GO:0002094: polyprenyltransferase activity2.54E-03
51GO:0004029: aldehyde dehydrogenase (NAD) activity3.14E-03
52GO:0036402: proteasome-activating ATPase activity3.14E-03
53GO:1990714: hydroxyproline O-galactosyltransferase activity3.14E-03
54GO:0015035: protein disulfide oxidoreductase activity3.64E-03
55GO:0004012: phospholipid-translocating ATPase activity3.77E-03
56GO:0004656: procollagen-proline 4-dioxygenase activity3.77E-03
57GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.77E-03
58GO:0043295: glutathione binding4.45E-03
59GO:0016831: carboxy-lyase activity4.45E-03
60GO:0008506: sucrose:proton symporter activity4.45E-03
61GO:0008235: metalloexopeptidase activity4.45E-03
62GO:0008121: ubiquinol-cytochrome-c reductase activity4.45E-03
63GO:0005506: iron ion binding4.64E-03
64GO:0051213: dioxygenase activity4.82E-03
65GO:0052747: sinapyl alcohol dehydrogenase activity5.17E-03
66GO:0015491: cation:cation antiporter activity5.17E-03
67GO:0004034: aldose 1-epimerase activity5.17E-03
68GO:0008135: translation factor activity, RNA binding5.92E-03
69GO:0071949: FAD binding6.71E-03
70GO:0003678: DNA helicase activity6.71E-03
71GO:0016207: 4-coumarate-CoA ligase activity6.71E-03
72GO:0030955: potassium ion binding7.54E-03
73GO:0016844: strictosidine synthase activity7.54E-03
74GO:0015112: nitrate transmembrane transporter activity7.54E-03
75GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.54E-03
76GO:0004743: pyruvate kinase activity7.54E-03
77GO:0019825: oxygen binding8.22E-03
78GO:0004568: chitinase activity8.40E-03
79GO:0008171: O-methyltransferase activity8.40E-03
80GO:0008794: arsenate reductase (glutaredoxin) activity9.30E-03
81GO:0004177: aminopeptidase activity9.30E-03
82GO:0045551: cinnamyl-alcohol dehydrogenase activity1.02E-02
83GO:0008378: galactosyltransferase activity1.02E-02
84GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.12E-02
85GO:0005315: inorganic phosphate transmembrane transporter activity1.12E-02
86GO:0005262: calcium channel activity1.12E-02
87GO:0005388: calcium-transporting ATPase activity1.12E-02
88GO:0000175: 3'-5'-exoribonuclease activity1.12E-02
89GO:0020037: heme binding1.17E-02
90GO:0000287: magnesium ion binding1.20E-02
91GO:0004535: poly(A)-specific ribonuclease activity1.22E-02
92GO:0004175: endopeptidase activity1.22E-02
93GO:0004970: ionotropic glutamate receptor activity1.32E-02
94GO:0005217: intracellular ligand-gated ion channel activity1.32E-02
95GO:0030552: cAMP binding1.32E-02
96GO:0030553: cGMP binding1.32E-02
97GO:0017025: TBP-class protein binding1.32E-02
98GO:0008061: chitin binding1.32E-02
99GO:0043531: ADP binding1.38E-02
100GO:0031418: L-ascorbic acid binding1.54E-02
101GO:0004497: monooxygenase activity1.61E-02
102GO:0005216: ion channel activity1.65E-02
103GO:0061630: ubiquitin protein ligase activity1.72E-02
104GO:0004540: ribonuclease activity1.76E-02
105GO:0004298: threonine-type endopeptidase activity1.76E-02
106GO:0008408: 3'-5' exonuclease activity1.76E-02
107GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.76E-02
108GO:0016740: transferase activity2.14E-02
109GO:0005249: voltage-gated potassium channel activity2.37E-02
110GO:0030551: cyclic nucleotide binding2.37E-02
111GO:0016758: transferase activity, transferring hexosyl groups2.42E-02
112GO:0004842: ubiquitin-protein transferase activity2.62E-02
113GO:0003924: GTPase activity2.64E-02
114GO:0016853: isomerase activity2.64E-02
115GO:0004843: thiol-dependent ubiquitin-specific protease activity2.91E-02
116GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.19E-02
117GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.20E-02
118GO:0008237: metallopeptidase activity3.48E-02
119GO:0008194: UDP-glycosyltransferase activity3.84E-02
120GO:0004806: triglyceride lipase activity4.25E-02
121GO:0030247: polysaccharide binding4.25E-02
122GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.41E-02
123GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.57E-02
124GO:0015238: drug transmembrane transporter activity4.73E-02
125GO:0005096: GTPase activator activity4.73E-02
126GO:0004222: metalloendopeptidase activity4.89E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005783: endoplasmic reticulum4.99E-14
3GO:0005886: plasma membrane5.40E-08
4GO:0005789: endoplasmic reticulum membrane3.68E-06
5GO:0030134: ER to Golgi transport vesicle3.89E-06
6GO:0005829: cytosol2.77E-05
7GO:0016020: membrane3.42E-05
8GO:0005788: endoplasmic reticulum lumen5.94E-05
9GO:0016021: integral component of membrane7.90E-05
10GO:0030014: CCR4-NOT complex2.92E-04
11GO:0005773: vacuole5.92E-04
12GO:0000015: phosphopyruvate hydratase complex6.40E-04
13GO:0031314: extrinsic component of mitochondrial inner membrane6.40E-04
14GO:0005794: Golgi apparatus1.24E-03
15GO:0031461: cullin-RING ubiquitin ligase complex1.48E-03
16GO:0030660: Golgi-associated vesicle membrane1.99E-03
17GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.99E-03
18GO:0000502: proteasome complex2.24E-03
19GO:0005746: mitochondrial respiratory chain2.54E-03
20GO:0005801: cis-Golgi network3.77E-03
21GO:0031597: cytosolic proteasome complex3.77E-03
22GO:0000794: condensed nuclear chromosome4.45E-03
23GO:0031595: nuclear proteasome complex4.45E-03
24GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.17E-03
25GO:0000326: protein storage vacuole5.92E-03
26GO:0019773: proteasome core complex, alpha-subunit complex5.92E-03
27GO:0008540: proteasome regulatory particle, base subcomplex7.54E-03
28GO:0005774: vacuolar membrane8.36E-03
29GO:0017119: Golgi transport complex8.40E-03
30GO:0005740: mitochondrial envelope8.40E-03
31GO:0008541: proteasome regulatory particle, lid subcomplex9.30E-03
32GO:0005765: lysosomal membrane9.30E-03
33GO:0005887: integral component of plasma membrane1.06E-02
34GO:0005750: mitochondrial respiratory chain complex III1.22E-02
35GO:0030176: integral component of endoplasmic reticulum membrane1.32E-02
36GO:0005741: mitochondrial outer membrane1.76E-02
37GO:0005834: heterotrimeric G-protein complex1.76E-02
38GO:0005839: proteasome core complex1.76E-02
39GO:0015629: actin cytoskeleton2.00E-02
40GO:0030136: clathrin-coated vesicle2.25E-02
41GO:0005743: mitochondrial inner membrane2.41E-02
42GO:0000139: Golgi membrane2.53E-02
43GO:0009524: phragmoplast2.63E-02
44GO:0009504: cell plate2.77E-02
45GO:0005618: cell wall2.78E-02
46GO:0032580: Golgi cisterna membrane3.34E-02
47GO:0009707: chloroplast outer membrane4.57E-02
48GO:0000151: ubiquitin ligase complex4.57E-02
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Gene type



Gene DE type