GO Enrichment Analysis of Co-expressed Genes with
AT5G03460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045747: positive regulation of Notch signaling pathway | 0.00E+00 |
| 2 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 3 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 4 | GO:0031564: transcription antitermination | 0.00E+00 |
| 5 | GO:0002221: pattern recognition receptor signaling pathway | 1.24E-07 |
| 6 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.24E-07 |
| 7 | GO:0080142: regulation of salicylic acid biosynthetic process | 2.26E-06 |
| 8 | GO:0006422: aspartyl-tRNA aminoacylation | 4.45E-05 |
| 9 | GO:0006421: asparaginyl-tRNA aminoacylation | 1.89E-04 |
| 10 | GO:0015031: protein transport | 2.33E-04 |
| 11 | GO:0051131: chaperone-mediated protein complex assembly | 2.78E-04 |
| 12 | GO:0006383: transcription from RNA polymerase III promoter | 2.78E-04 |
| 13 | GO:0000187: activation of MAPK activity | 2.78E-04 |
| 14 | GO:2000038: regulation of stomatal complex development | 3.73E-04 |
| 15 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 3.73E-04 |
| 16 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 3.73E-04 |
| 17 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.73E-04 |
| 18 | GO:0045116: protein neddylation | 4.75E-04 |
| 19 | GO:0045087: innate immune response | 6.50E-04 |
| 20 | GO:2000037: regulation of stomatal complex patterning | 6.94E-04 |
| 21 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 6.94E-04 |
| 22 | GO:0006333: chromatin assembly or disassembly | 8.11E-04 |
| 23 | GO:0007389: pattern specification process | 1.06E-03 |
| 24 | GO:0046685: response to arsenic-containing substance | 1.19E-03 |
| 25 | GO:0000103: sulfate assimilation | 1.47E-03 |
| 26 | GO:0048829: root cap development | 1.47E-03 |
| 27 | GO:0009734: auxin-activated signaling pathway | 1.55E-03 |
| 28 | GO:0071365: cellular response to auxin stimulus | 1.77E-03 |
| 29 | GO:0010229: inflorescence development | 1.92E-03 |
| 30 | GO:0010053: root epidermal cell differentiation | 2.25E-03 |
| 31 | GO:0010187: negative regulation of seed germination | 2.60E-03 |
| 32 | GO:0000027: ribosomal large subunit assembly | 2.60E-03 |
| 33 | GO:0043622: cortical microtubule organization | 2.77E-03 |
| 34 | GO:0007166: cell surface receptor signaling pathway | 3.00E-03 |
| 35 | GO:0009814: defense response, incompatible interaction | 3.14E-03 |
| 36 | GO:0007131: reciprocal meiotic recombination | 3.14E-03 |
| 37 | GO:0010227: floral organ abscission | 3.33E-03 |
| 38 | GO:0042391: regulation of membrane potential | 3.93E-03 |
| 39 | GO:0010501: RNA secondary structure unwinding | 3.93E-03 |
| 40 | GO:0006662: glycerol ether metabolic process | 4.14E-03 |
| 41 | GO:0006970: response to osmotic stress | 4.35E-03 |
| 42 | GO:0006623: protein targeting to vacuole | 4.56E-03 |
| 43 | GO:0009414: response to water deprivation | 4.90E-03 |
| 44 | GO:0007264: small GTPase mediated signal transduction | 4.99E-03 |
| 45 | GO:0030163: protein catabolic process | 5.22E-03 |
| 46 | GO:0010252: auxin homeostasis | 5.45E-03 |
| 47 | GO:0006914: autophagy | 5.45E-03 |
| 48 | GO:0045454: cell redox homeostasis | 5.99E-03 |
| 49 | GO:0016126: sterol biosynthetic process | 6.15E-03 |
| 50 | GO:0006886: intracellular protein transport | 6.17E-03 |
| 51 | GO:0006499: N-terminal protein myristoylation | 7.91E-03 |
| 52 | GO:0009407: toxin catabolic process | 7.91E-03 |
| 53 | GO:0009631: cold acclimation | 8.18E-03 |
| 54 | GO:0010043: response to zinc ion | 8.18E-03 |
| 55 | GO:0009867: jasmonic acid mediated signaling pathway | 8.71E-03 |
| 56 | GO:0034599: cellular response to oxidative stress | 8.99E-03 |
| 57 | GO:0006839: mitochondrial transport | 9.55E-03 |
| 58 | GO:0009965: leaf morphogenesis | 1.13E-02 |
| 59 | GO:0000165: MAPK cascade | 1.19E-02 |
| 60 | GO:0009626: plant-type hypersensitive response | 1.51E-02 |
| 61 | GO:0009553: embryo sac development | 1.61E-02 |
| 62 | GO:0009624: response to nematode | 1.65E-02 |
| 63 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.79E-02 |
| 64 | GO:0000398: mRNA splicing, via spliceosome | 1.83E-02 |
| 65 | GO:0050832: defense response to fungus | 2.01E-02 |
| 66 | GO:0009845: seed germination | 2.05E-02 |
| 67 | GO:0055114: oxidation-reduction process | 2.25E-02 |
| 68 | GO:0042742: defense response to bacterium | 2.66E-02 |
| 69 | GO:0008380: RNA splicing | 2.76E-02 |
| 70 | GO:0009617: response to bacterium | 2.76E-02 |
| 71 | GO:0042254: ribosome biogenesis | 3.36E-02 |
| 72 | GO:0007049: cell cycle | 3.59E-02 |
| 73 | GO:0009409: response to cold | 3.60E-02 |
| 74 | GO:0016192: vesicle-mediated transport | 4.01E-02 |
| 75 | GO:0044550: secondary metabolite biosynthetic process | 4.11E-02 |
| 76 | GO:0046686: response to cadmium ion | 4.14E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 3 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 4 | GO:0019786: Atg8-specific protease activity | 4.45E-05 |
| 5 | GO:0004815: aspartate-tRNA ligase activity | 4.45E-05 |
| 6 | GO:0019779: Atg8 activating enzyme activity | 1.10E-04 |
| 7 | GO:0019781: NEDD8 activating enzyme activity | 1.10E-04 |
| 8 | GO:0004816: asparagine-tRNA ligase activity | 1.89E-04 |
| 9 | GO:0005093: Rab GDP-dissociation inhibitor activity | 1.89E-04 |
| 10 | GO:0030527: structural constituent of chromatin | 2.78E-04 |
| 11 | GO:0031176: endo-1,4-beta-xylanase activity | 2.78E-04 |
| 12 | GO:0035198: miRNA binding | 2.78E-04 |
| 13 | GO:0000166: nucleotide binding | 3.11E-04 |
| 14 | GO:0019776: Atg8 ligase activity | 3.73E-04 |
| 15 | GO:0004040: amidase activity | 4.75E-04 |
| 16 | GO:0008641: small protein activating enzyme activity | 4.75E-04 |
| 17 | GO:0004602: glutathione peroxidase activity | 6.94E-04 |
| 18 | GO:0008320: protein transmembrane transporter activity | 8.11E-04 |
| 19 | GO:0043295: glutathione binding | 8.11E-04 |
| 20 | GO:0004708: MAP kinase kinase activity | 9.32E-04 |
| 21 | GO:0015035: protein disulfide oxidoreductase activity | 1.58E-03 |
| 22 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.61E-03 |
| 23 | GO:0003712: transcription cofactor activity | 2.25E-03 |
| 24 | GO:0030552: cAMP binding | 2.25E-03 |
| 25 | GO:0030553: cGMP binding | 2.25E-03 |
| 26 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.46E-03 |
| 27 | GO:0005216: ion channel activity | 2.77E-03 |
| 28 | GO:0051087: chaperone binding | 2.77E-03 |
| 29 | GO:0047134: protein-disulfide reductase activity | 3.73E-03 |
| 30 | GO:0005249: voltage-gated potassium channel activity | 3.93E-03 |
| 31 | GO:0030551: cyclic nucleotide binding | 3.93E-03 |
| 32 | GO:0010181: FMN binding | 4.35E-03 |
| 33 | GO:0004791: thioredoxin-disulfide reductase activity | 4.35E-03 |
| 34 | GO:0005524: ATP binding | 4.77E-03 |
| 35 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.22E-03 |
| 36 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 5.68E-03 |
| 37 | GO:0004004: ATP-dependent RNA helicase activity | 6.89E-03 |
| 38 | GO:0016301: kinase activity | 7.10E-03 |
| 39 | GO:0016491: oxidoreductase activity | 7.17E-03 |
| 40 | GO:0005096: GTPase activator activity | 7.65E-03 |
| 41 | GO:0003746: translation elongation factor activity | 8.71E-03 |
| 42 | GO:0003697: single-stranded DNA binding | 8.71E-03 |
| 43 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 9.27E-03 |
| 44 | GO:0004364: glutathione transferase activity | 1.01E-02 |
| 45 | GO:0003690: double-stranded DNA binding | 1.32E-02 |
| 46 | GO:0022857: transmembrane transporter activity | 1.58E-02 |
| 47 | GO:0051082: unfolded protein binding | 1.65E-02 |
| 48 | GO:0016746: transferase activity, transferring acyl groups | 1.68E-02 |
| 49 | GO:0008026: ATP-dependent helicase activity | 1.72E-02 |
| 50 | GO:0004386: helicase activity | 1.75E-02 |
| 51 | GO:0005507: copper ion binding | 1.87E-02 |
| 52 | GO:0008194: UDP-glycosyltransferase activity | 2.63E-02 |
| 53 | GO:0003682: chromatin binding | 3.45E-02 |
| 54 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005829: cytosol | 5.81E-05 |
| 3 | GO:0030658: transport vesicle membrane | 2.78E-04 |
| 4 | GO:0005775: vacuolar lumen | 2.78E-04 |
| 5 | GO:0005776: autophagosome | 3.73E-04 |
| 6 | GO:0019005: SCF ubiquitin ligase complex | 5.18E-04 |
| 7 | GO:0016272: prefoldin complex | 6.94E-04 |
| 8 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 8.11E-04 |
| 9 | GO:0000421: autophagosome membrane | 9.32E-04 |
| 10 | GO:0017119: Golgi transport complex | 1.47E-03 |
| 11 | GO:0043234: protein complex | 2.42E-03 |
| 12 | GO:0031410: cytoplasmic vesicle | 3.14E-03 |
| 13 | GO:0000785: chromatin | 4.99E-03 |
| 14 | GO:0032580: Golgi cisterna membrane | 5.45E-03 |
| 15 | GO:0005886: plasma membrane | 6.08E-03 |
| 16 | GO:0000932: P-body | 6.15E-03 |
| 17 | GO:0005737: cytoplasm | 6.79E-03 |
| 18 | GO:0005730: nucleolus | 9.85E-03 |
| 19 | GO:0005887: integral component of plasma membrane | 1.00E-02 |
| 20 | GO:0005681: spliceosomal complex | 1.45E-02 |
| 21 | GO:0016607: nuclear speck | 1.48E-02 |
| 22 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.75E-02 |
| 23 | GO:0005802: trans-Golgi network | 2.11E-02 |
| 24 | GO:0005768: endosome | 2.40E-02 |
| 25 | GO:0048046: apoplast | 2.59E-02 |
| 26 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.55E-02 |
| 27 | GO:0005874: microtubule | 3.78E-02 |
| 28 | GO:0005743: mitochondrial inner membrane | 4.85E-02 |