GO Enrichment Analysis of Co-expressed Genes with
AT5G03140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.91E-09 |
| 4 | GO:0006810: transport | 2.34E-07 |
| 5 | GO:0015979: photosynthesis | 1.12E-06 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 1.24E-06 |
| 7 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.16E-06 |
| 8 | GO:0006546: glycine catabolic process | 5.16E-06 |
| 9 | GO:0010196: nonphotochemical quenching | 2.60E-05 |
| 10 | GO:0051180: vitamin transport | 7.23E-05 |
| 11 | GO:0030974: thiamine pyrophosphate transport | 7.23E-05 |
| 12 | GO:0080093: regulation of photorespiration | 7.23E-05 |
| 13 | GO:0031998: regulation of fatty acid beta-oxidation | 7.23E-05 |
| 14 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.43E-05 |
| 15 | GO:0009735: response to cytokinin | 1.06E-04 |
| 16 | GO:0009658: chloroplast organization | 1.26E-04 |
| 17 | GO:0009767: photosynthetic electron transport chain | 1.27E-04 |
| 18 | GO:0019253: reductive pentose-phosphate cycle | 1.45E-04 |
| 19 | GO:0010207: photosystem II assembly | 1.45E-04 |
| 20 | GO:0015893: drug transport | 1.74E-04 |
| 21 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.74E-04 |
| 22 | GO:0006000: fructose metabolic process | 2.93E-04 |
| 23 | GO:0009800: cinnamic acid biosynthetic process | 4.23E-04 |
| 24 | GO:0042742: defense response to bacterium | 4.94E-04 |
| 25 | GO:0045727: positive regulation of translation | 5.65E-04 |
| 26 | GO:0071483: cellular response to blue light | 5.65E-04 |
| 27 | GO:0006544: glycine metabolic process | 7.14E-04 |
| 28 | GO:0043097: pyrimidine nucleoside salvage | 7.14E-04 |
| 29 | GO:0006564: L-serine biosynthetic process | 7.14E-04 |
| 30 | GO:0006097: glyoxylate cycle | 7.14E-04 |
| 31 | GO:0006461: protein complex assembly | 7.14E-04 |
| 32 | GO:0006559: L-phenylalanine catabolic process | 8.73E-04 |
| 33 | GO:0006206: pyrimidine nucleobase metabolic process | 8.73E-04 |
| 34 | GO:0006563: L-serine metabolic process | 8.73E-04 |
| 35 | GO:0042549: photosystem II stabilization | 8.73E-04 |
| 36 | GO:0009645: response to low light intensity stimulus | 1.21E-03 |
| 37 | GO:0048564: photosystem I assembly | 1.40E-03 |
| 38 | GO:0006002: fructose 6-phosphate metabolic process | 1.59E-03 |
| 39 | GO:0071482: cellular response to light stimulus | 1.59E-03 |
| 40 | GO:0009657: plastid organization | 1.59E-03 |
| 41 | GO:0032544: plastid translation | 1.59E-03 |
| 42 | GO:0000373: Group II intron splicing | 1.80E-03 |
| 43 | GO:0035999: tetrahydrofolate interconversion | 2.01E-03 |
| 44 | GO:0006535: cysteine biosynthetic process from serine | 2.23E-03 |
| 45 | GO:0006352: DNA-templated transcription, initiation | 2.46E-03 |
| 46 | GO:0000272: polysaccharide catabolic process | 2.46E-03 |
| 47 | GO:0005986: sucrose biosynthetic process | 2.94E-03 |
| 48 | GO:0006108: malate metabolic process | 2.94E-03 |
| 49 | GO:0006094: gluconeogenesis | 2.94E-03 |
| 50 | GO:0010143: cutin biosynthetic process | 3.19E-03 |
| 51 | GO:0090351: seedling development | 3.44E-03 |
| 52 | GO:0009409: response to cold | 3.82E-03 |
| 53 | GO:0019344: cysteine biosynthetic process | 3.98E-03 |
| 54 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.26E-03 |
| 55 | GO:0016226: iron-sulfur cluster assembly | 4.83E-03 |
| 56 | GO:0080092: regulation of pollen tube growth | 4.83E-03 |
| 57 | GO:0007623: circadian rhythm | 4.91E-03 |
| 58 | GO:0042631: cellular response to water deprivation | 6.05E-03 |
| 59 | GO:0006520: cellular amino acid metabolic process | 6.38E-03 |
| 60 | GO:0015986: ATP synthesis coupled proton transport | 6.70E-03 |
| 61 | GO:0019252: starch biosynthetic process | 7.04E-03 |
| 62 | GO:0008654: phospholipid biosynthetic process | 7.04E-03 |
| 63 | GO:0080167: response to karrikin | 9.41E-03 |
| 64 | GO:0010027: thylakoid membrane organization | 9.54E-03 |
| 65 | GO:0042128: nitrate assimilation | 1.03E-02 |
| 66 | GO:0009817: defense response to fungus, incompatible interaction | 1.15E-02 |
| 67 | GO:0030244: cellulose biosynthetic process | 1.15E-02 |
| 68 | GO:0018298: protein-chromophore linkage | 1.15E-02 |
| 69 | GO:0009407: toxin catabolic process | 1.23E-02 |
| 70 | GO:0009853: photorespiration | 1.36E-02 |
| 71 | GO:0016051: carbohydrate biosynthetic process | 1.36E-02 |
| 72 | GO:0006099: tricarboxylic acid cycle | 1.40E-02 |
| 73 | GO:0006839: mitochondrial transport | 1.49E-02 |
| 74 | GO:0009644: response to high light intensity | 1.72E-02 |
| 75 | GO:0009636: response to toxic substance | 1.77E-02 |
| 76 | GO:0006855: drug transmembrane transport | 1.81E-02 |
| 77 | GO:0009664: plant-type cell wall organization | 1.91E-02 |
| 78 | GO:0046686: response to cadmium ion | 1.99E-02 |
| 79 | GO:0006364: rRNA processing | 2.01E-02 |
| 80 | GO:0009626: plant-type hypersensitive response | 2.37E-02 |
| 81 | GO:0009611: response to wounding | 2.53E-02 |
| 82 | GO:0018105: peptidyl-serine phosphorylation | 2.64E-02 |
| 83 | GO:0045893: positive regulation of transcription, DNA-templated | 2.84E-02 |
| 84 | GO:0009058: biosynthetic process | 3.15E-02 |
| 85 | GO:0055114: oxidation-reduction process | 3.19E-02 |
| 86 | GO:0010468: regulation of gene expression | 4.32E-02 |
| 87 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 7 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.16E-08 |
| 8 | GO:0048038: quinone binding | 2.18E-05 |
| 9 | GO:0090422: thiamine pyrophosphate transporter activity | 7.23E-05 |
| 10 | GO:0009496: plastoquinol--plastocyanin reductase activity | 7.23E-05 |
| 11 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 7.23E-05 |
| 12 | GO:0004047: aminomethyltransferase activity | 1.74E-04 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.74E-04 |
| 14 | GO:0008967: phosphoglycolate phosphatase activity | 1.74E-04 |
| 15 | GO:0050017: L-3-cyanoalanine synthase activity | 1.74E-04 |
| 16 | GO:0010297: heteropolysaccharide binding | 1.74E-04 |
| 17 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.74E-04 |
| 18 | GO:0045548: phenylalanine ammonia-lyase activity | 2.93E-04 |
| 19 | GO:0032947: protein complex scaffold | 2.93E-04 |
| 20 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 2.93E-04 |
| 21 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.23E-04 |
| 22 | GO:0016987: sigma factor activity | 5.65E-04 |
| 23 | GO:0001053: plastid sigma factor activity | 5.65E-04 |
| 24 | GO:0004372: glycine hydroxymethyltransferase activity | 7.14E-04 |
| 25 | GO:0016168: chlorophyll binding | 7.74E-04 |
| 26 | GO:0042578: phosphoric ester hydrolase activity | 8.73E-04 |
| 27 | GO:0016615: malate dehydrogenase activity | 8.73E-04 |
| 28 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 8.73E-04 |
| 29 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.04E-03 |
| 30 | GO:0030060: L-malate dehydrogenase activity | 1.04E-03 |
| 31 | GO:0004849: uridine kinase activity | 1.04E-03 |
| 32 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.04E-03 |
| 33 | GO:0004124: cysteine synthase activity | 1.04E-03 |
| 34 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.59E-03 |
| 35 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.63E-03 |
| 36 | GO:0005509: calcium ion binding | 2.13E-03 |
| 37 | GO:0015386: potassium:proton antiporter activity | 2.46E-03 |
| 38 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.46E-03 |
| 39 | GO:0008266: poly(U) RNA binding | 3.19E-03 |
| 40 | GO:0019843: rRNA binding | 3.57E-03 |
| 41 | GO:0031409: pigment binding | 3.71E-03 |
| 42 | GO:0030170: pyridoxal phosphate binding | 3.96E-03 |
| 43 | GO:0051536: iron-sulfur cluster binding | 3.98E-03 |
| 44 | GO:0043424: protein histidine kinase binding | 4.26E-03 |
| 45 | GO:0015079: potassium ion transmembrane transporter activity | 4.26E-03 |
| 46 | GO:0004176: ATP-dependent peptidase activity | 4.54E-03 |
| 47 | GO:0022891: substrate-specific transmembrane transporter activity | 5.13E-03 |
| 48 | GO:0050662: coenzyme binding | 6.70E-03 |
| 49 | GO:0016791: phosphatase activity | 8.43E-03 |
| 50 | GO:0008483: transaminase activity | 8.79E-03 |
| 51 | GO:0016597: amino acid binding | 9.16E-03 |
| 52 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.03E-02 |
| 53 | GO:0004683: calmodulin-dependent protein kinase activity | 1.07E-02 |
| 54 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.11E-02 |
| 55 | GO:0015238: drug transmembrane transporter activity | 1.19E-02 |
| 56 | GO:0004222: metalloendopeptidase activity | 1.23E-02 |
| 57 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.27E-02 |
| 58 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.40E-02 |
| 59 | GO:0004364: glutathione transferase activity | 1.58E-02 |
| 60 | GO:0005198: structural molecule activity | 1.77E-02 |
| 61 | GO:0051287: NAD binding | 1.86E-02 |
| 62 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.01E-02 |
| 63 | GO:0016874: ligase activity | 2.47E-02 |
| 64 | GO:0016746: transferase activity, transferring acyl groups | 2.64E-02 |
| 65 | GO:0016787: hydrolase activity | 2.96E-02 |
| 66 | GO:0015297: antiporter activity | 3.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.13E-27 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 3.24E-22 |
| 5 | GO:0009941: chloroplast envelope | 1.18E-12 |
| 6 | GO:0009534: chloroplast thylakoid | 7.95E-12 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.29E-12 |
| 8 | GO:0009570: chloroplast stroma | 1.72E-10 |
| 9 | GO:0009579: thylakoid | 1.94E-10 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 6.03E-08 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 1.25E-06 |
| 12 | GO:0030095: chloroplast photosystem II | 2.55E-06 |
| 13 | GO:0009523: photosystem II | 1.94E-05 |
| 14 | GO:0019898: extrinsic component of membrane | 1.94E-05 |
| 15 | GO:0010319: stromule | 3.28E-05 |
| 16 | GO:0009782: photosystem I antenna complex | 7.23E-05 |
| 17 | GO:0009344: nitrite reductase complex [NAD(P)H] | 7.23E-05 |
| 18 | GO:0031977: thylakoid lumen | 1.10E-04 |
| 19 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.74E-04 |
| 20 | GO:0031969: chloroplast membrane | 1.83E-04 |
| 21 | GO:0016020: membrane | 2.03E-04 |
| 22 | GO:0048046: apoplast | 3.19E-04 |
| 23 | GO:0005960: glycine cleavage complex | 4.23E-04 |
| 24 | GO:0009517: PSII associated light-harvesting complex II | 5.65E-04 |
| 25 | GO:0009512: cytochrome b6f complex | 7.14E-04 |
| 26 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 8.73E-04 |
| 27 | GO:0009533: chloroplast stromal thylakoid | 1.21E-03 |
| 28 | GO:0009539: photosystem II reaction center | 1.59E-03 |
| 29 | GO:0016021: integral component of membrane | 2.56E-03 |
| 30 | GO:0009706: chloroplast inner membrane | 2.86E-03 |
| 31 | GO:0010287: plastoglobule | 3.38E-03 |
| 32 | GO:0030076: light-harvesting complex | 3.44E-03 |
| 33 | GO:0042651: thylakoid membrane | 4.26E-03 |
| 34 | GO:0030529: intracellular ribonucleoprotein complex | 9.54E-03 |
| 35 | GO:0022626: cytosolic ribosome | 2.37E-02 |
| 36 | GO:0005777: peroxisome | 2.84E-02 |
| 37 | GO:0005759: mitochondrial matrix | 3.56E-02 |
| 38 | GO:0046658: anchored component of plasma membrane | 4.65E-02 |