Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G02490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
2GO:0042430: indole-containing compound metabolic process0.00E+00
3GO:0006042: glucosamine biosynthetic process0.00E+00
4GO:1901137: carbohydrate derivative biosynthetic process0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0006457: protein folding5.32E-14
7GO:0034976: response to endoplasmic reticulum stress1.72E-07
8GO:0055074: calcium ion homeostasis2.75E-06
9GO:0009651: response to salt stress1.51E-05
10GO:0046686: response to cadmium ion3.94E-05
11GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.28E-05
12GO:0009553: embryo sac development6.86E-05
13GO:0006979: response to oxidative stress7.02E-05
14GO:0006605: protein targeting7.49E-05
15GO:0030968: endoplasmic reticulum unfolded protein response9.46E-05
16GO:0045454: cell redox homeostasis1.04E-04
17GO:0080093: regulation of photorespiration1.20E-04
18GO:0019276: UDP-N-acetylgalactosamine metabolic process1.20E-04
19GO:0031998: regulation of fatty acid beta-oxidation1.20E-04
20GO:0006047: UDP-N-acetylglucosamine metabolic process1.20E-04
21GO:0009408: response to heat1.60E-04
22GO:0006099: tricarboxylic acid cycle2.37E-04
23GO:0015865: purine nucleotide transport2.77E-04
24GO:0051252: regulation of RNA metabolic process2.77E-04
25GO:0031204: posttranslational protein targeting to membrane, translocation2.77E-04
26GO:0071395: cellular response to jasmonic acid stimulus2.77E-04
27GO:0009838: abscission2.77E-04
28GO:0045041: protein import into mitochondrial intermembrane space2.77E-04
29GO:0009863: salicylic acid mediated signaling pathway4.09E-04
30GO:0010581: regulation of starch biosynthetic process4.58E-04
31GO:0006048: UDP-N-acetylglucosamine biosynthetic process4.58E-04
32GO:0006954: inflammatory response4.58E-04
33GO:1902626: assembly of large subunit precursor of preribosome4.58E-04
34GO:0010359: regulation of anion channel activity4.58E-04
35GO:0006011: UDP-glucose metabolic process4.58E-04
36GO:0016998: cell wall macromolecule catabolic process4.95E-04
37GO:0061077: chaperone-mediated protein folding4.95E-04
38GO:0009626: plant-type hypersensitive response6.20E-04
39GO:0042823: pyridoxal phosphate biosynthetic process6.57E-04
40GO:0051131: chaperone-mediated protein complex assembly6.57E-04
41GO:0046902: regulation of mitochondrial membrane permeability6.57E-04
42GO:0072334: UDP-galactose transmembrane transport6.57E-04
43GO:0006621: protein retention in ER lumen8.72E-04
44GO:0010188: response to microbial phytotoxin8.72E-04
45GO:0010193: response to ozone9.78E-04
46GO:0046283: anthocyanin-containing compound metabolic process1.10E-03
47GO:0006097: glyoxylate cycle1.10E-03
48GO:0006465: signal peptide processing1.10E-03
49GO:0009615: response to virus1.39E-03
50GO:0009816: defense response to bacterium, incompatible interaction1.47E-03
51GO:0042026: protein refolding1.61E-03
52GO:0006458: 'de novo' protein folding1.61E-03
53GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.89E-03
54GO:0030026: cellular manganese ion homeostasis1.89E-03
55GO:0006880: intracellular sequestering of iron ion1.89E-03
56GO:0071446: cellular response to salicylic acid stimulus1.89E-03
57GO:0050821: protein stabilization2.19E-03
58GO:0031540: regulation of anthocyanin biosynthetic process2.19E-03
59GO:0006102: isocitrate metabolic process2.19E-03
60GO:0009555: pollen development2.32E-03
61GO:0010497: plasmodesmata-mediated intercellular transport2.50E-03
62GO:0010204: defense response signaling pathway, resistance gene-independent2.50E-03
63GO:0010112: regulation of systemic acquired resistance2.82E-03
64GO:0006189: 'de novo' IMP biosynthetic process2.82E-03
65GO:0015780: nucleotide-sugar transport2.82E-03
66GO:0051707: response to other organism2.93E-03
67GO:2000280: regulation of root development3.16E-03
68GO:0090332: stomatal closure3.16E-03
69GO:0009870: defense response signaling pathway, resistance gene-dependent3.51E-03
70GO:0006032: chitin catabolic process3.51E-03
71GO:0051555: flavonol biosynthetic process3.51E-03
72GO:0072593: reactive oxygen species metabolic process3.88E-03
73GO:0006886: intracellular protein transport4.22E-03
74GO:0006108: malate metabolic process4.64E-03
75GO:0010075: regulation of meristem growth4.64E-03
76GO:0002237: response to molecule of bacterial origin5.04E-03
77GO:0009934: regulation of meristem structural organization5.04E-03
78GO:0048467: gynoecium development5.04E-03
79GO:0008152: metabolic process5.99E-03
80GO:0000027: ribosomal large subunit assembly6.32E-03
81GO:0010187: negative regulation of seed germination6.32E-03
82GO:0009695: jasmonic acid biosynthetic process6.76E-03
83GO:0042742: defense response to bacterium6.77E-03
84GO:0030433: ubiquitin-dependent ERAD pathway7.69E-03
85GO:0009411: response to UV8.18E-03
86GO:0009306: protein secretion8.66E-03
87GO:0034220: ion transmembrane transport9.68E-03
88GO:0000413: protein peptidyl-prolyl isomerization9.68E-03
89GO:0010118: stomatal movement9.68E-03
90GO:0006662: glycerol ether metabolic process1.02E-02
91GO:0010197: polar nucleus fusion1.02E-02
92GO:0048868: pollen tube development1.02E-02
93GO:0015986: ATP synthesis coupled proton transport1.07E-02
94GO:0009617: response to bacterium1.15E-02
95GO:0006891: intra-Golgi vesicle-mediated transport1.18E-02
96GO:0071281: cellular response to iron ion1.30E-02
97GO:0009567: double fertilization forming a zygote and endosperm1.36E-02
98GO:0010286: heat acclimation1.41E-02
99GO:0042254: ribosome biogenesis1.52E-02
100GO:0009627: systemic acquired resistance1.66E-02
101GO:0006950: response to stress1.72E-02
102GO:0008219: cell death1.85E-02
103GO:0006499: N-terminal protein myristoylation1.99E-02
104GO:0046777: protein autophosphorylation1.99E-02
105GO:0010119: regulation of stomatal movement2.05E-02
106GO:0006468: protein phosphorylation2.10E-02
107GO:0009867: jasmonic acid mediated signaling pathway2.19E-02
108GO:0034599: cellular response to oxidative stress2.26E-02
109GO:0006839: mitochondrial transport2.41E-02
110GO:0042542: response to hydrogen peroxide2.55E-02
111GO:0009414: response to water deprivation2.59E-02
112GO:0009751: response to salicylic acid2.71E-02
113GO:0006855: drug transmembrane transport2.93E-02
114GO:0031347: regulation of defense response3.01E-02
115GO:0006486: protein glycosylation3.25E-02
116GO:0010224: response to UV-B3.33E-02
117GO:0009909: regulation of flower development3.49E-02
118GO:0015031: protein transport3.60E-02
119GO:0006508: proteolysis3.62E-02
120GO:0009620: response to fungus3.91E-02
121GO:0009624: response to nematode4.17E-02
122GO:0018105: peptidyl-serine phosphorylation4.26E-02
123GO:0006810: transport4.29E-02
124GO:0009735: response to cytokinin4.44E-02
125GO:0009611: response to wounding4.94E-02
RankGO TermAdjusted P value
1GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
4GO:0052873: FMN reductase (NADPH) activity0.00E+00
5GO:0005046: KDEL sequence binding0.00E+00
6GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity0.00E+00
7GO:0008752: FMN reductase activity0.00E+00
8GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
9GO:0051082: unfolded protein binding2.28E-12
10GO:0005460: UDP-glucose transmembrane transporter activity6.48E-06
11GO:0005459: UDP-galactose transmembrane transporter activity2.01E-05
12GO:0003756: protein disulfide isomerase activity3.10E-05
13GO:0005524: ATP binding9.60E-05
14GO:0080042: ADP-glucose pyrophosphohydrolase activity1.20E-04
15GO:0030544: Hsp70 protein binding1.20E-04
16GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity1.20E-04
17GO:0048037: cofactor binding1.20E-04
18GO:0004638: phosphoribosylaminoimidazole carboxylase activity1.20E-04
19GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity1.20E-04
20GO:0097367: carbohydrate derivative binding1.20E-04
21GO:0017110: nucleoside-diphosphatase activity2.77E-04
22GO:0004775: succinate-CoA ligase (ADP-forming) activity2.77E-04
23GO:0008428: ribonuclease inhibitor activity2.77E-04
24GO:0008517: folic acid transporter activity2.77E-04
25GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity2.77E-04
26GO:0004776: succinate-CoA ligase (GDP-forming) activity2.77E-04
27GO:0080041: ADP-ribose pyrophosphohydrolase activity2.77E-04
28GO:0005509: calcium ion binding3.20E-04
29GO:0003955: NAD(P)H dehydrogenase (quinone) activity4.58E-04
30GO:0046423: allene-oxide cyclase activity4.58E-04
31GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity4.58E-04
32GO:0000030: mannosyltransferase activity4.58E-04
33GO:0004449: isocitrate dehydrogenase (NAD+) activity6.57E-04
34GO:0010178: IAA-amino acid conjugate hydrolase activity6.57E-04
35GO:0046923: ER retention sequence binding8.72E-04
36GO:0005086: ARF guanyl-nucleotide exchange factor activity8.72E-04
37GO:0008948: oxaloacetate decarboxylase activity1.10E-03
38GO:0047631: ADP-ribose diphosphatase activity1.10E-03
39GO:0005471: ATP:ADP antiporter activity1.10E-03
40GO:0002020: protease binding1.10E-03
41GO:0000210: NAD+ diphosphatase activity1.35E-03
42GO:0016615: malate dehydrogenase activity1.35E-03
43GO:0030060: L-malate dehydrogenase activity1.61E-03
44GO:0008121: ubiquinol-cytochrome-c reductase activity1.89E-03
45GO:0016887: ATPase activity1.89E-03
46GO:0047893: flavonol 3-O-glucosyltransferase activity2.19E-03
47GO:0003746: translation elongation factor activity2.28E-03
48GO:0005384: manganese ion transmembrane transporter activity3.16E-03
49GO:0005381: iron ion transmembrane transporter activity3.16E-03
50GO:0004568: chitinase activity3.51E-03
51GO:0051287: NAD binding3.53E-03
52GO:0030246: carbohydrate binding3.64E-03
53GO:0008559: xenobiotic-transporting ATPase activity3.88E-03
54GO:0044183: protein binding involved in protein folding3.88E-03
55GO:0005507: copper ion binding3.97E-03
56GO:0031072: heat shock protein binding4.64E-03
57GO:0015114: phosphate ion transmembrane transporter activity4.64E-03
58GO:0008266: poly(U) RNA binding5.04E-03
59GO:0080043: quercetin 3-O-glucosyltransferase activity5.10E-03
60GO:0080044: quercetin 7-O-glucosyltransferase activity5.10E-03
61GO:0008061: chitin binding5.46E-03
62GO:0015035: protein disulfide oxidoreductase activity5.75E-03
63GO:0016758: transferase activity, transferring hexosyl groups6.80E-03
64GO:0035251: UDP-glucosyltransferase activity7.22E-03
65GO:0016779: nucleotidyltransferase activity7.69E-03
66GO:0008565: protein transporter activity8.35E-03
67GO:0004674: protein serine/threonine kinase activity8.86E-03
68GO:0047134: protein-disulfide reductase activity9.17E-03
69GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.02E-02
70GO:0010181: FMN binding1.07E-02
71GO:0004791: thioredoxin-disulfide reductase activity1.07E-02
72GO:0016853: isomerase activity1.07E-02
73GO:0008194: UDP-glycosyltransferase activity1.08E-02
74GO:0004872: receptor activity1.13E-02
75GO:0004672: protein kinase activity1.21E-02
76GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.30E-02
77GO:0008483: transaminase activity1.41E-02
78GO:0008237: metallopeptidase activity1.41E-02
79GO:0015250: water channel activity1.54E-02
80GO:0009931: calcium-dependent protein serine/threonine kinase activity1.66E-02
81GO:0004683: calmodulin-dependent protein kinase activity1.72E-02
82GO:0016798: hydrolase activity, acting on glycosyl bonds1.72E-02
83GO:0008233: peptidase activity1.83E-02
84GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.85E-02
85GO:0004222: metalloendopeptidase activity1.99E-02
86GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.05E-02
87GO:0050897: cobalt ion binding2.05E-02
88GO:0030145: manganese ion binding2.05E-02
89GO:0004712: protein serine/threonine/tyrosine kinase activity2.33E-02
90GO:0003924: GTPase activity2.74E-02
91GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.93E-02
92GO:0009055: electron carrier activity2.94E-02
93GO:0016298: lipase activity3.33E-02
94GO:0031625: ubiquitin protein ligase binding3.49E-02
95GO:0045735: nutrient reservoir activity3.66E-02
RankGO TermAdjusted P value
1GO:0031205: endoplasmic reticulum Sec complex0.00E+00
2GO:0005784: Sec61 translocon complex0.00E+00
3GO:0005783: endoplasmic reticulum2.57E-15
4GO:0005788: endoplasmic reticulum lumen3.04E-15
5GO:0005774: vacuolar membrane3.40E-09
6GO:0005773: vacuole5.38E-09
7GO:0009507: chloroplast8.06E-08
8GO:0005886: plasma membrane4.06E-07
9GO:0009506: plasmodesma1.70E-06
10GO:0005740: mitochondrial envelope3.11E-06
11GO:0005618: cell wall4.69E-06
12GO:0005787: signal peptidase complex1.20E-04
13GO:0030176: integral component of endoplasmic reticulum membrane3.30E-04
14GO:0048046: apoplast4.37E-04
15GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)8.72E-04
16GO:0005789: endoplasmic reticulum membrane8.91E-04
17GO:0005623: cell9.85E-04
18GO:0010168: ER body1.35E-03
19GO:0016363: nuclear matrix1.61E-03
20GO:0005801: cis-Golgi network1.61E-03
21GO:0030173: integral component of Golgi membrane1.61E-03
22GO:0005829: cytosol1.67E-03
23GO:0009505: plant-type cell wall2.43E-03
24GO:0031090: organelle membrane2.82E-03
25GO:0005739: mitochondrion3.21E-03
26GO:0031225: anchored component of membrane4.56E-03
27GO:0031012: extracellular matrix4.64E-03
28GO:0005747: mitochondrial respiratory chain complex I4.79E-03
29GO:0005750: mitochondrial respiratory chain complex III5.04E-03
30GO:0005753: mitochondrial proton-transporting ATP synthase complex5.46E-03
31GO:0005795: Golgi stack5.46E-03
32GO:0005741: mitochondrial outer membrane7.22E-03
33GO:0016592: mediator complex1.24E-02
34GO:0016020: membrane1.26E-02
35GO:0000151: ubiquitin ligase complex1.85E-02
36GO:0005794: Golgi apparatus1.89E-02
37GO:0022625: cytosolic large ribosomal subunit1.95E-02
38GO:0000325: plant-type vacuole2.05E-02
39GO:0005622: intracellular2.27E-02
40GO:0005743: mitochondrial inner membrane2.55E-02
41GO:0043231: intracellular membrane-bounded organelle3.02E-02
42GO:0005737: cytoplasm3.21E-02
43GO:0000502: proteasome complex3.25E-02
44GO:0022626: cytosolic ribosome4.64E-02
45GO:0009543: chloroplast thylakoid lumen4.89E-02
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Gene type



Gene DE type