Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G02290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
3GO:0042430: indole-containing compound metabolic process0.00E+00
4GO:0002376: immune system process0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0045792: negative regulation of cell size0.00E+00
7GO:0050691: regulation of defense response to virus by host0.00E+00
8GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
9GO:0042742: defense response to bacterium1.21E-12
10GO:0009617: response to bacterium5.72E-12
11GO:0010200: response to chitin1.17E-10
12GO:0006468: protein phosphorylation1.93E-09
13GO:0002237: response to molecule of bacterial origin4.27E-08
14GO:0034976: response to endoplasmic reticulum stress8.34E-08
15GO:0009751: response to salicylic acid1.50E-07
16GO:0006457: protein folding8.61E-07
17GO:0009816: defense response to bacterium, incompatible interaction4.60E-06
18GO:0010120: camalexin biosynthetic process1.41E-05
19GO:0030968: endoplasmic reticulum unfolded protein response1.41E-05
20GO:0048281: inflorescence morphogenesis1.71E-05
21GO:0010193: response to ozone3.56E-05
22GO:0001676: long-chain fatty acid metabolic process3.81E-05
23GO:0006979: response to oxidative stress4.13E-05
24GO:0046686: response to cadmium ion4.63E-05
25GO:0010150: leaf senescence4.86E-05
26GO:0045454: cell redox homeostasis6.05E-05
27GO:0080142: regulation of salicylic acid biosynthetic process6.79E-05
28GO:0009626: plant-type hypersensitive response8.87E-05
29GO:0009627: systemic acquired resistance8.96E-05
30GO:0009697: salicylic acid biosynthetic process1.07E-04
31GO:0009407: toxin catabolic process1.42E-04
32GO:0006952: defense response1.65E-04
33GO:0045087: innate immune response1.81E-04
34GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.10E-04
35GO:0009651: response to salt stress2.25E-04
36GO:0009625: response to insect2.25E-04
37GO:0070370: cellular heat acclimation2.73E-04
38GO:0051707: response to other organism2.78E-04
39GO:0006805: xenobiotic metabolic process3.27E-04
40GO:0009609: response to symbiotic bacterium3.27E-04
41GO:0009700: indole phytoalexin biosynthetic process3.27E-04
42GO:0080136: priming of cellular response to stress3.27E-04
43GO:0060862: negative regulation of floral organ abscission3.27E-04
44GO:0046244: salicylic acid catabolic process3.27E-04
45GO:0009636: response to toxic substance3.36E-04
46GO:0030162: regulation of proteolysis3.44E-04
47GO:0031347: regulation of defense response3.79E-04
48GO:0009409: response to cold4.32E-04
49GO:0007166: cell surface receptor signaling pathway4.38E-04
50GO:0000302: response to reactive oxygen species4.58E-04
51GO:0010112: regulation of systemic acquired resistance5.07E-04
52GO:0006032: chitin catabolic process6.98E-04
53GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.13E-04
54GO:0080185: effector dependent induction by symbiont of host immune response7.13E-04
55GO:1902000: homogentisate catabolic process7.13E-04
56GO:0010541: acropetal auxin transport7.13E-04
57GO:0031349: positive regulation of defense response7.13E-04
58GO:0002221: pattern recognition receptor signaling pathway7.13E-04
59GO:0071395: cellular response to jasmonic acid stimulus7.13E-04
60GO:2000072: regulation of defense response to fungus, incompatible interaction7.13E-04
61GO:0008219: cell death1.02E-03
62GO:0010272: response to silver ion1.16E-03
63GO:0045039: protein import into mitochondrial inner membrane1.16E-03
64GO:0009072: aromatic amino acid family metabolic process1.16E-03
65GO:1900140: regulation of seedling development1.16E-03
66GO:0010581: regulation of starch biosynthetic process1.16E-03
67GO:0015031: protein transport1.16E-03
68GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.16E-03
69GO:0055074: calcium ion homeostasis1.16E-03
70GO:0034605: cellular response to heat1.17E-03
71GO:0007034: vacuolar transport1.17E-03
72GO:0070588: calcium ion transmembrane transport1.31E-03
73GO:0002239: response to oomycetes1.66E-03
74GO:0033014: tetrapyrrole biosynthetic process1.66E-03
75GO:0043207: response to external biotic stimulus1.66E-03
76GO:0072334: UDP-galactose transmembrane transport1.66E-03
77GO:0015696: ammonium transport1.66E-03
78GO:0048530: fruit morphogenesis1.66E-03
79GO:0071323: cellular response to chitin1.66E-03
80GO:0000187: activation of MAPK activity1.66E-03
81GO:0048194: Golgi vesicle budding1.66E-03
82GO:0016998: cell wall macromolecule catabolic process1.95E-03
83GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.09E-03
84GO:0009814: defense response, incompatible interaction2.14E-03
85GO:0060548: negative regulation of cell death2.23E-03
86GO:0072488: ammonium transmembrane transport2.23E-03
87GO:2000038: regulation of stomatal complex development2.23E-03
88GO:0006621: protein retention in ER lumen2.23E-03
89GO:0010508: positive regulation of autophagy2.23E-03
90GO:0010188: response to microbial phytotoxin2.23E-03
91GO:0051205: protein insertion into membrane2.23E-03
92GO:0080037: negative regulation of cytokinin-activated signaling pathway2.23E-03
93GO:0009306: protein secretion2.53E-03
94GO:0006465: signal peptide processing2.84E-03
95GO:2000762: regulation of phenylpropanoid metabolic process2.84E-03
96GO:0046283: anthocyanin-containing compound metabolic process2.84E-03
97GO:0006564: L-serine biosynthetic process2.84E-03
98GO:0031365: N-terminal protein amino acid modification2.84E-03
99GO:0006461: protein complex assembly2.84E-03
100GO:0006662: glycerol ether metabolic process3.19E-03
101GO:0010197: polar nucleus fusion3.19E-03
102GO:0050832: defense response to fungus3.33E-03
103GO:0060918: auxin transport3.51E-03
104GO:0009117: nucleotide metabolic process3.51E-03
105GO:0018258: protein O-linked glycosylation via hydroxyproline3.51E-03
106GO:0009759: indole glucosinolate biosynthetic process3.51E-03
107GO:0009228: thiamine biosynthetic process3.51E-03
108GO:0010942: positive regulation of cell death3.51E-03
109GO:0010405: arabinogalactan protein metabolic process3.51E-03
110GO:0006751: glutathione catabolic process3.51E-03
111GO:0006623: protein targeting to vacuole3.68E-03
112GO:0006970: response to osmotic stress3.85E-03
113GO:0006891: intra-Golgi vesicle-mediated transport3.94E-03
114GO:0009737: response to abscisic acid3.98E-03
115GO:0009553: embryo sac development4.18E-03
116GO:2000037: regulation of stomatal complex patterning4.23E-03
117GO:2000067: regulation of root morphogenesis4.23E-03
118GO:0009612: response to mechanical stimulus4.23E-03
119GO:0000911: cytokinesis by cell plate formation4.23E-03
120GO:0006694: steroid biosynthetic process4.23E-03
121GO:0010199: organ boundary specification between lateral organs and the meristem4.23E-03
122GO:0010555: response to mannitol4.23E-03
123GO:0009610: response to symbiotic fungus4.99E-03
124GO:0043090: amino acid import4.99E-03
125GO:0071446: cellular response to salicylic acid stimulus4.99E-03
126GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway4.99E-03
127GO:1900056: negative regulation of leaf senescence4.99E-03
128GO:0050829: defense response to Gram-negative bacterium4.99E-03
129GO:0006904: vesicle docking involved in exocytosis5.07E-03
130GO:0016192: vesicle-mediated transport5.15E-03
131GO:0046777: protein autophosphorylation5.28E-03
132GO:0009615: response to virus5.70E-03
133GO:0009819: drought recovery5.80E-03
134GO:0031540: regulation of anthocyanin biosynthetic process5.80E-03
135GO:0006102: isocitrate metabolic process5.80E-03
136GO:0009611: response to wounding6.18E-03
137GO:0009414: response to water deprivation6.36E-03
138GO:0006886: intracellular protein transport6.58E-03
139GO:0009699: phenylpropanoid biosynthetic process6.65E-03
140GO:0007186: G-protein coupled receptor signaling pathway6.65E-03
141GO:0010204: defense response signaling pathway, resistance gene-independent6.65E-03
142GO:0043562: cellular response to nitrogen levels6.65E-03
143GO:0009817: defense response to fungus, incompatible interaction7.44E-03
144GO:0015780: nucleotide-sugar transport7.54E-03
145GO:0006783: heme biosynthetic process7.54E-03
146GO:0010205: photoinhibition8.48E-03
147GO:0043067: regulation of programmed cell death8.48E-03
148GO:0048268: clathrin coat assembly8.48E-03
149GO:0048354: mucilage biosynthetic process involved in seed coat development8.48E-03
150GO:0009870: defense response signaling pathway, resistance gene-dependent9.45E-03
151GO:0000103: sulfate assimilation9.45E-03
152GO:0034599: cellular response to oxidative stress9.88E-03
153GO:0009682: induced systemic resistance1.05E-02
154GO:0052544: defense response by callose deposition in cell wall1.05E-02
155GO:0000272: polysaccharide catabolic process1.05E-02
156GO:0015770: sucrose transport1.05E-02
157GO:0009750: response to fructose1.05E-02
158GO:0048229: gametophyte development1.05E-02
159GO:0010468: regulation of gene expression1.09E-02
160GO:0006631: fatty acid metabolic process1.12E-02
161GO:0012501: programmed cell death1.15E-02
162GO:0015706: nitrate transport1.15E-02
163GO:0010105: negative regulation of ethylene-activated signaling pathway1.15E-02
164GO:0071365: cellular response to auxin stimulus1.15E-02
165GO:0042542: response to hydrogen peroxide1.17E-02
166GO:0010102: lateral root morphogenesis1.26E-02
167GO:0010229: inflorescence development1.26E-02
168GO:0010075: regulation of meristem growth1.26E-02
169GO:0009934: regulation of meristem structural organization1.37E-02
170GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.48E-02
171GO:0010053: root epidermal cell differentiation1.49E-02
172GO:0009969: xyloglucan biosynthetic process1.49E-02
173GO:0042343: indole glucosinolate metabolic process1.49E-02
174GO:0010167: response to nitrate1.49E-02
175GO:0006486: protein glycosylation1.65E-02
176GO:0010224: response to UV-B1.71E-02
177GO:0009863: salicylic acid mediated signaling pathway1.73E-02
178GO:2000377: regulation of reactive oxygen species metabolic process1.73E-02
179GO:0009723: response to ethylene1.83E-02
180GO:0098542: defense response to other organism1.99E-02
181GO:0080167: response to karrikin2.00E-02
182GO:0009555: pollen development2.05E-02
183GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.08E-02
184GO:2000022: regulation of jasmonic acid mediated signaling pathway2.12E-02
185GO:0030433: ubiquitin-dependent ERAD pathway2.12E-02
186GO:0035428: hexose transmembrane transport2.12E-02
187GO:0031348: negative regulation of defense response2.12E-02
188GO:0071456: cellular response to hypoxia2.12E-02
189GO:0019748: secondary metabolic process2.12E-02
190GO:0009620: response to fungus2.15E-02
191GO:0035556: intracellular signal transduction2.22E-02
192GO:0009411: response to UV2.25E-02
193GO:0010227: floral organ abscission2.25E-02
194GO:0006508: proteolysis2.33E-02
195GO:0009624: response to nematode2.35E-02
196GO:0042631: cellular response to water deprivation2.68E-02
197GO:0010051: xylem and phloem pattern formation2.68E-02
198GO:0048868: pollen tube development2.82E-02
199GO:0046323: glucose import2.82E-02
200GO:0009646: response to absence of light2.97E-02
201GO:0061025: membrane fusion2.97E-02
202GO:0009749: response to glucose3.12E-02
203GO:0010183: pollen tube guidance3.12E-02
204GO:0009845: seed germination3.18E-02
205GO:0009408: response to heat3.25E-02
206GO:0002229: defense response to oomycetes3.28E-02
207GO:0009790: embryo development3.43E-02
208GO:0030163: protein catabolic process3.60E-02
209GO:0009567: double fertilization forming a zygote and endosperm3.76E-02
210GO:0051607: defense response to virus4.09E-02
211GO:0000910: cytokinesis4.09E-02
212GO:0009607: response to biotic stimulus4.43E-02
213GO:0042128: nitrate assimilation4.61E-02
214GO:0006470: protein dephosphorylation4.63E-02
215GO:0015995: chlorophyll biosynthetic process4.78E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0005046: KDEL sequence binding0.00E+00
4GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
5GO:0016034: maleylacetoacetate isomerase activity0.00E+00
6GO:0005524: ATP binding1.74E-10
7GO:0004674: protein serine/threonine kinase activity8.26E-09
8GO:0016301: kinase activity4.08E-07
9GO:0004714: transmembrane receptor protein tyrosine kinase activity9.78E-06
10GO:0003756: protein disulfide isomerase activity1.42E-05
11GO:0005460: UDP-glucose transmembrane transporter activity3.81E-05
12GO:0005516: calmodulin binding7.09E-05
13GO:0005459: UDP-galactose transmembrane transporter activity1.07E-04
14GO:0047631: ADP-ribose diphosphatase activity1.07E-04
15GO:0051082: unfolded protein binding1.15E-04
16GO:0000210: NAD+ diphosphatase activity1.54E-04
17GO:0004672: protein kinase activity1.56E-04
18GO:0102391: decanoate--CoA ligase activity2.10E-04
19GO:0004364: glutathione transferase activity2.60E-04
20GO:0043295: glutathione binding2.73E-04
21GO:0004467: long-chain fatty acid-CoA ligase activity2.73E-04
22GO:2001227: quercitrin binding3.27E-04
23GO:1901149: salicylic acid binding3.27E-04
24GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.27E-04
25GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.27E-04
26GO:0080042: ADP-glucose pyrophosphohydrolase activity3.27E-04
27GO:0004325: ferrochelatase activity3.27E-04
28GO:2001147: camalexin binding3.27E-04
29GO:0031127: alpha-(1,2)-fucosyltransferase activity3.27E-04
30GO:0051287: NAD binding3.79E-04
31GO:0005509: calcium ion binding5.37E-04
32GO:0004568: chitinase activity6.98E-04
33GO:0004713: protein tyrosine kinase activity6.98E-04
34GO:0004617: phosphoglycerate dehydrogenase activity7.13E-04
35GO:0038199: ethylene receptor activity7.13E-04
36GO:0017110: nucleoside-diphosphatase activity7.13E-04
37GO:0019172: glyoxalase III activity7.13E-04
38GO:0004338: glucan exo-1,3-beta-glucosidase activity7.13E-04
39GO:0004385: guanylate kinase activity7.13E-04
40GO:0080041: ADP-ribose pyrophosphohydrolase activity7.13E-04
41GO:0005388: calcium-transporting ATPase activity1.04E-03
42GO:0052692: raffinose alpha-galactosidase activity1.16E-03
43GO:0001664: G-protein coupled receptor binding1.16E-03
44GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.16E-03
45GO:0003840: gamma-glutamyltransferase activity1.16E-03
46GO:0036374: glutathione hydrolase activity1.16E-03
47GO:0004148: dihydrolipoyl dehydrogenase activity1.16E-03
48GO:0004557: alpha-galactosidase activity1.16E-03
49GO:0031683: G-protein beta/gamma-subunit complex binding1.16E-03
50GO:0050897: cobalt ion binding1.22E-03
51GO:0008061: chitin binding1.31E-03
52GO:0004190: aspartic-type endopeptidase activity1.31E-03
53GO:0004712: protein serine/threonine/tyrosine kinase activity1.53E-03
54GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.58E-03
55GO:0004871: signal transducer activity1.63E-03
56GO:0035529: NADH pyrophosphatase activity1.66E-03
57GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.66E-03
58GO:0004449: isocitrate dehydrogenase (NAD+) activity1.66E-03
59GO:0051740: ethylene binding1.66E-03
60GO:0004707: MAP kinase activity1.95E-03
61GO:0005515: protein binding2.19E-03
62GO:0046923: ER retention sequence binding2.23E-03
63GO:0047134: protein-disulfide reductase activity2.74E-03
64GO:0015145: monosaccharide transmembrane transporter activity2.84E-03
65GO:0031625: ubiquitin protein ligase binding3.15E-03
66GO:0004791: thioredoxin-disulfide reductase activity3.43E-03
67GO:0030976: thiamine pyrophosphate binding3.51E-03
68GO:1990714: hydroxyproline O-galactosyltransferase activity3.51E-03
69GO:0004029: aldehyde dehydrogenase (NAD) activity3.51E-03
70GO:0008519: ammonium transmembrane transporter activity3.51E-03
71GO:0004872: receptor activity3.68E-03
72GO:0004602: glutathione peroxidase activity4.23E-03
73GO:0004012: phospholipid-translocating ATPase activity4.23E-03
74GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.49E-03
75GO:0004143: diacylglycerol kinase activity4.99E-03
76GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.99E-03
77GO:0008506: sucrose:proton symporter activity4.99E-03
78GO:0008235: metalloexopeptidase activity4.99E-03
79GO:0008320: protein transmembrane transporter activity4.99E-03
80GO:0043565: sequence-specific DNA binding5.49E-03
81GO:0004708: MAP kinase kinase activity5.80E-03
82GO:0008135: translation factor activity, RNA binding6.65E-03
83GO:0004683: calmodulin-dependent protein kinase activity6.71E-03
84GO:0008565: protein transporter activity7.26E-03
85GO:0008417: fucosyltransferase activity7.54E-03
86GO:0015112: nitrate transmembrane transporter activity8.48E-03
87GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.48E-03
88GO:0003746: translation elongation factor activity9.44E-03
89GO:0005545: 1-phosphatidylinositol binding9.45E-03
90GO:0004673: protein histidine kinase activity9.45E-03
91GO:0030246: carbohydrate binding9.98E-03
92GO:0004177: aminopeptidase activity1.05E-02
93GO:0008559: xenobiotic-transporting ATPase activity1.05E-02
94GO:0008378: galactosyltransferase activity1.15E-02
95GO:0005262: calcium channel activity1.26E-02
96GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.26E-02
97GO:0031072: heat shock protein binding1.26E-02
98GO:0000155: phosphorelay sensor kinase activity1.26E-02
99GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.37E-02
100GO:0005525: GTP binding1.41E-02
101GO:0004867: serine-type endopeptidase inhibitor activity1.49E-02
102GO:0003712: transcription cofactor activity1.49E-02
103GO:0016298: lipase activity1.71E-02
104GO:0033612: receptor serine/threonine kinase binding1.99E-02
105GO:0022891: substrate-specific transmembrane transporter activity2.25E-02
106GO:0008810: cellulase activity2.25E-02
107GO:0015035: protein disulfide oxidoreductase activity2.42E-02
108GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.76E-02
109GO:0030276: clathrin binding2.82E-02
110GO:0004527: exonuclease activity2.82E-02
111GO:0016758: transferase activity, transferring hexosyl groups2.87E-02
112GO:0016853: isomerase activity2.97E-02
113GO:0005355: glucose transmembrane transporter activity2.97E-02
114GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.92E-02
115GO:0016597: amino acid binding4.09E-02
116GO:0051213: dioxygenase activity4.26E-02
117GO:0009931: calcium-dependent protein serine/threonine kinase activity4.61E-02
118GO:0030247: polysaccharide binding4.78E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005886: plasma membrane3.02E-19
3GO:0005783: endoplasmic reticulum2.67E-12
4GO:0005788: endoplasmic reticulum lumen4.84E-09
5GO:0016021: integral component of membrane8.64E-07
6GO:0005801: cis-Golgi network2.10E-04
7GO:0005774: vacuolar membrane2.51E-04
8GO:0005773: vacuole3.95E-04
9GO:0017119: Golgi transport complex6.98E-04
10GO:0005901: caveola7.13E-04
11GO:0030134: ER to Golgi transport vesicle7.13E-04
12GO:0019005: SCF ubiquitin ligase complex1.02E-03
13GO:0046861: glyoxysomal membrane1.16E-03
14GO:0030139: endocytic vesicle1.16E-03
15GO:0030176: integral component of endoplasmic reticulum membrane1.31E-03
16GO:0005795: Golgi stack1.31E-03
17GO:0070062: extracellular exosome1.66E-03
18GO:0005789: endoplasmic reticulum membrane1.80E-03
19GO:0009898: cytoplasmic side of plasma membrane2.23E-03
20GO:0000164: protein phosphatase type 1 complex2.84E-03
21GO:0005887: integral component of plasma membrane3.72E-03
22GO:0030173: integral component of Golgi membrane4.23E-03
23GO:0005794: Golgi apparatus4.92E-03
24GO:0009514: glyoxysome6.65E-03
25GO:0000326: protein storage vacuole6.65E-03
26GO:0031090: organelle membrane7.54E-03
27GO:0030665: clathrin-coated vesicle membrane8.48E-03
28GO:0005740: mitochondrial envelope9.45E-03
29GO:0005829: cytosol9.69E-03
30GO:0009505: plant-type cell wall1.03E-02
31GO:0031902: late endosome membrane1.12E-02
32GO:0031012: extracellular matrix1.26E-02
33GO:0048046: apoplast1.38E-02
34GO:0005618: cell wall1.68E-02
35GO:0005741: mitochondrial outer membrane1.99E-02
36GO:0005905: clathrin-coated pit1.99E-02
37GO:0005834: heterotrimeric G-protein complex2.08E-02
38GO:0030136: clathrin-coated vesicle2.53E-02
39GO:0009504: cell plate3.12E-02
40GO:0019898: extrinsic component of membrane3.12E-02
41GO:0009506: plasmodesma3.21E-02
42GO:0016592: mediator complex3.44E-02
43GO:0000145: exocyst3.44E-02
44GO:0043231: intracellular membrane-bounded organelle3.67E-02
45GO:0032580: Golgi cisterna membrane3.76E-02
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Gene type



Gene DE type