Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G02230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006982: response to lipid hydroperoxide0.00E+00
2GO:0010335: response to non-ionic osmotic stress0.00E+00
3GO:0098586: cellular response to virus0.00E+00
4GO:0017009: protein-phycocyanobilin linkage0.00E+00
5GO:0090393: sepal giant cell development0.00E+00
6GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
7GO:0046471: phosphatidylglycerol metabolic process0.00E+00
8GO:0042823: pyridoxal phosphate biosynthetic process2.48E-06
9GO:0019464: glycine decarboxylation via glycine cleavage system4.77E-06
10GO:0006546: glycine catabolic process4.77E-06
11GO:0006659: phosphatidylserine biosynthetic process6.91E-05
12GO:0080093: regulation of photorespiration6.91E-05
13GO:0031998: regulation of fatty acid beta-oxidation6.91E-05
14GO:0051775: response to redox state6.91E-05
15GO:0009853: photorespiration7.80E-05
16GO:0006108: malate metabolic process1.19E-04
17GO:0046741: transport of virus in host, tissue to tissue1.66E-04
18GO:0042853: L-alanine catabolic process1.66E-04
19GO:0042819: vitamin B6 biosynthetic process1.66E-04
20GO:0006636: unsaturated fatty acid biosynthetic process1.74E-04
21GO:0005977: glycogen metabolic process2.81E-04
22GO:0006011: UDP-glucose metabolic process2.81E-04
23GO:0006520: cellular amino acid metabolic process3.94E-04
24GO:0009058: biosynthetic process4.04E-04
25GO:0043572: plastid fission4.06E-04
26GO:0032877: positive regulation of DNA endoreduplication4.06E-04
27GO:0046836: glycolipid transport4.06E-04
28GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.06E-04
29GO:0071484: cellular response to light intensity4.06E-04
30GO:0006107: oxaloacetate metabolic process4.06E-04
31GO:0008615: pyridoxine biosynthetic process4.06E-04
32GO:0051781: positive regulation of cell division5.42E-04
33GO:0015994: chlorophyll metabolic process5.42E-04
34GO:0006021: inositol biosynthetic process5.42E-04
35GO:0006734: NADH metabolic process5.42E-04
36GO:0010236: plastoquinone biosynthetic process6.87E-04
37GO:0006097: glyoxylate cycle6.87E-04
38GO:0043097: pyrimidine nucleoside salvage6.87E-04
39GO:0010117: photoprotection6.87E-04
40GO:0010942: positive regulation of cell death8.40E-04
41GO:0010264: myo-inositol hexakisphosphate biosynthetic process8.40E-04
42GO:0006206: pyrimidine nucleobase metabolic process8.40E-04
43GO:0010190: cytochrome b6f complex assembly8.40E-04
44GO:0009854: oxidative photosynthetic carbon pathway9.99E-04
45GO:0006099: tricarboxylic acid cycle1.16E-03
46GO:0052543: callose deposition in cell wall1.34E-03
47GO:0048564: photosystem I assembly1.34E-03
48GO:0008610: lipid biosynthetic process1.34E-03
49GO:2000031: regulation of salicylic acid mediated signaling pathway1.53E-03
50GO:0071482: cellular response to light stimulus1.53E-03
51GO:0055114: oxidation-reduction process1.61E-03
52GO:0000373: Group II intron splicing1.73E-03
53GO:0006098: pentose-phosphate shunt1.73E-03
54GO:0009821: alkaloid biosynthetic process1.73E-03
55GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process1.93E-03
56GO:0006857: oligopeptide transport2.04E-03
57GO:0042742: defense response to bacterium2.19E-03
58GO:0018119: peptidyl-cysteine S-nitrosylation2.36E-03
59GO:0009773: photosynthetic electron transport in photosystem I2.36E-03
60GO:0071365: cellular response to auxin stimulus2.58E-03
61GO:0002213: defense response to insect2.58E-03
62GO:0006094: gluconeogenesis2.82E-03
63GO:0005986: sucrose biosynthetic process2.82E-03
64GO:0010020: chloroplast fission3.06E-03
65GO:0019253: reductive pentose-phosphate cycle3.06E-03
66GO:0051302: regulation of cell division4.08E-03
67GO:0008299: isoprenoid biosynthetic process4.08E-03
68GO:0007017: microtubule-based process4.08E-03
69GO:0009695: jasmonic acid biosynthetic process4.08E-03
70GO:0009768: photosynthesis, light harvesting in photosystem I4.08E-03
71GO:0009269: response to desiccation4.35E-03
72GO:0006730: one-carbon metabolic process4.63E-03
73GO:0016226: iron-sulfur cluster assembly4.63E-03
74GO:2000022: regulation of jasmonic acid mediated signaling pathway4.63E-03
75GO:0030433: ubiquitin-dependent ERAD pathway4.63E-03
76GO:0042631: cellular response to water deprivation5.80E-03
77GO:0006662: glycerol ether metabolic process6.11E-03
78GO:0009646: response to absence of light6.42E-03
79GO:0019252: starch biosynthetic process6.74E-03
80GO:0008654: phospholipid biosynthetic process6.74E-03
81GO:0009791: post-embryonic development6.74E-03
82GO:0000302: response to reactive oxygen species7.07E-03
83GO:0030163: protein catabolic process7.73E-03
84GO:0007049: cell cycle7.97E-03
85GO:0051607: defense response to virus8.77E-03
86GO:0080167: response to karrikin8.84E-03
87GO:0016126: sterol biosynthetic process9.13E-03
88GO:0042128: nitrate assimilation9.87E-03
89GO:0015979: photosynthesis1.01E-02
90GO:0018298: protein-chromophore linkage1.10E-02
91GO:0010311: lateral root formation1.14E-02
92GO:0010218: response to far red light1.18E-02
93GO:0009637: response to blue light1.30E-02
94GO:0034599: cellular response to oxidative stress1.34E-02
95GO:0009753: response to jasmonic acid1.40E-02
96GO:0006631: fatty acid metabolic process1.47E-02
97GO:0009409: response to cold1.54E-02
98GO:0000209: protein polyubiquitination1.60E-02
99GO:0009644: response to high light intensity1.65E-02
100GO:0006855: drug transmembrane transport1.74E-02
101GO:0042538: hyperosmotic salinity response1.83E-02
102GO:0046686: response to cadmium ion1.84E-02
103GO:0010224: response to UV-B1.97E-02
104GO:0006417: regulation of translation2.07E-02
105GO:0009735: response to cytokinin2.13E-02
106GO:0006096: glycolytic process2.17E-02
107GO:0006633: fatty acid biosynthetic process3.41E-02
108GO:0006413: translational initiation3.47E-02
109GO:0010150: leaf senescence3.65E-02
110GO:0009658: chloroplast organization4.97E-02
RankGO TermAdjusted P value
1GO:0008465: glycerate dehydrogenase activity0.00E+00
2GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
3GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
4GO:0050281: serine-glyoxylate transaminase activity0.00E+00
5GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
6GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity0.00E+00
7GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
8GO:0004760: serine-pyruvate transaminase activity0.00E+00
9GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
10GO:0008974: phosphoribulokinase activity0.00E+00
11GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
12GO:0004375: glycine dehydrogenase (decarboxylating) activity2.48E-06
13GO:0008453: alanine-glyoxylate transaminase activity4.77E-06
14GO:0016615: malate dehydrogenase activity1.23E-05
15GO:0030060: L-malate dehydrogenase activity1.76E-05
16GO:0008746: NAD(P)+ transhydrogenase activity6.91E-05
17GO:0035671: enone reductase activity6.91E-05
18GO:0047958: glycine:2-oxoglutarate aminotransferase activity6.91E-05
19GO:0050347: trans-octaprenyltranstransferase activity1.66E-04
20GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity1.66E-04
21GO:0004512: inositol-3-phosphate synthase activity1.66E-04
22GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity1.66E-04
23GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity2.81E-04
24GO:0032947: protein complex scaffold2.81E-04
25GO:0050307: sucrose-phosphate phosphatase activity2.81E-04
26GO:0017089: glycolipid transporter activity4.06E-04
27GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity4.06E-04
28GO:0048038: quinone binding4.85E-04
29GO:0051861: glycolipid binding5.42E-04
30GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor5.42E-04
31GO:0004506: squalene monooxygenase activity5.42E-04
32GO:0009011: starch synthase activity5.42E-04
33GO:0045300: acyl-[acyl-carrier-protein] desaturase activity6.87E-04
34GO:0004332: fructose-bisphosphate aldolase activity8.40E-04
35GO:0000210: NAD+ diphosphatase activity8.40E-04
36GO:0004849: uridine kinase activity9.99E-04
37GO:0043022: ribosome binding1.34E-03
38GO:0016844: strictosidine synthase activity1.93E-03
39GO:0030234: enzyme regulator activity2.14E-03
40GO:0004860: protein kinase inhibitor activity2.36E-03
41GO:0015198: oligopeptide transporter activity2.58E-03
42GO:0004089: carbonate dehydratase activity2.82E-03
43GO:0008266: poly(U) RNA binding3.06E-03
44GO:0031409: pigment binding3.56E-03
45GO:0051536: iron-sulfur cluster binding3.81E-03
46GO:0047134: protein-disulfide reductase activity5.50E-03
47GO:0008080: N-acetyltransferase activity6.11E-03
48GO:0004791: thioredoxin-disulfide reductase activity6.42E-03
49GO:0046982: protein heterodimerization activity7.00E-03
50GO:0016788: hydrolase activity, acting on ester bonds7.27E-03
51GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.73E-03
52GO:0016168: chlorophyll binding9.50E-03
53GO:0015238: drug transmembrane transporter activity1.14E-02
54GO:0015293: symporter activity1.69E-02
55GO:0005198: structural molecule activity1.69E-02
56GO:0051287: NAD binding1.78E-02
57GO:0003777: microtubule motor activity2.07E-02
58GO:0031625: ubiquitin protein ligase binding2.07E-02
59GO:0022857: transmembrane transporter activity2.37E-02
60GO:0015035: protein disulfide oxidoreductase activity2.52E-02
61GO:0016829: lyase activity3.07E-02
62GO:0030170: pyridoxal phosphate binding3.12E-02
63GO:0015297: antiporter activity3.53E-02
64GO:0003743: translation initiation factor activity4.07E-02
65GO:0000287: magnesium ion binding4.91E-02
RankGO TermAdjusted P value
1GO:0042579: microbody0.00E+00
2GO:0009507: chloroplast1.05E-16
3GO:0009570: chloroplast stroma1.09E-10
4GO:0009941: chloroplast envelope2.64E-07
5GO:0048046: apoplast7.93E-07
6GO:0009535: chloroplast thylakoid membrane1.05E-06
7GO:0005960: glycine cleavage complex2.48E-06
8GO:0009579: thylakoid1.74E-05
9GO:0010319: stromule2.98E-05
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.07E-05
11GO:0009534: chloroplast thylakoid1.65E-04
12GO:0010287: plastoglobule3.52E-04
13GO:0030286: dynein complex5.42E-04
14GO:0009707: chloroplast outer membrane8.92E-04
15GO:0005777: peroxisome9.34E-04
16GO:0031977: thylakoid lumen1.32E-03
17GO:0019013: viral nucleocapsid2.82E-03
18GO:0030076: light-harvesting complex3.30E-03
19GO:0005875: microtubule associated complex3.56E-03
20GO:0009522: photosystem I6.42E-03
21GO:0009523: photosystem II6.74E-03
22GO:0031969: chloroplast membrane8.84E-03
23GO:0030529: intracellular ribonucleoprotein complex9.13E-03
24GO:0019005: SCF ubiquitin ligase complex1.10E-02
25GO:0009536: plastid1.36E-02
26GO:0012505: endomembrane system2.42E-02
27GO:0009543: chloroplast thylakoid lumen2.90E-02
28GO:0005783: endoplasmic reticulum4.04E-02
29GO:0005774: vacuolar membrane4.95E-02
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Gene type



Gene DE type