co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010111: glyoxysome organization	0.00E+00
2	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
3	GO:0010360: negative regulation of anion channel activity	0.00E+00
4	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
5	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
6	GO:0032497: detection of lipopolysaccharide	0.00E+00
7	GO:0045022: early endosome to late endosome transport	0.00E+00
8	GO:0006983: ER overload response	0.00E+00
9	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
10	GO:0000188: inactivation of MAPK activity	0.00E+00
11	GO:0016559: peroxisome fission	2.41E-06
12	GO:0006014: D-ribose metabolic process	6.24E-05
13	GO:0006635: fatty acid beta-oxidation	1.54E-04
14	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.86E-04
15	GO:0007292: female gamete generation	1.86E-04
16	GO:0019628: urate catabolic process	1.86E-04
17	GO:0006481: C-terminal protein methylation	1.86E-04
18	GO:0010941: regulation of cell death	1.86E-04
19	GO:1902265: abscisic acid homeostasis	1.86E-04
20	GO:0035344: hypoxanthine transport	1.86E-04
21	GO:1902361: mitochondrial pyruvate transmembrane transport	1.86E-04
22	GO:0031338: regulation of vesicle fusion	1.86E-04
23	GO:0098721: uracil import across plasma membrane	1.86E-04
24	GO:0006144: purine nucleobase metabolic process	1.86E-04
25	GO:0098702: adenine import across plasma membrane	1.86E-04
26	GO:0035266: meristem growth	1.86E-04
27	GO:0098710: guanine import across plasma membrane	1.86E-04
28	GO:0006468: protein phosphorylation	2.25E-04
29	GO:0043069: negative regulation of programmed cell death	3.16E-04
30	GO:0050684: regulation of mRNA processing	4.19E-04
31	GO:0050994: regulation of lipid catabolic process	4.19E-04
32	GO:0006212: uracil catabolic process	4.19E-04
33	GO:0009727: detection of ethylene stimulus	4.19E-04
34	GO:0007584: response to nutrient	4.19E-04
35	GO:0051788: response to misfolded protein	4.19E-04
36	GO:0043066: negative regulation of apoptotic process	4.19E-04
37	GO:0019483: beta-alanine biosynthetic process	4.19E-04
38	GO:0006850: mitochondrial pyruvate transport	4.19E-04
39	GO:0052542: defense response by callose deposition	4.19E-04
40	GO:0051258: protein polymerization	4.19E-04
41	GO:0042325: regulation of phosphorylation	4.19E-04
42	GO:0019441: tryptophan catabolic process to kynurenine	4.19E-04
43	GO:0019395: fatty acid oxidation	4.19E-04
44	GO:0000266: mitochondrial fission	4.20E-04
45	GO:0045087: innate immune response	5.00E-04
46	GO:0007031: peroxisome organization	6.03E-04
47	GO:0060968: regulation of gene silencing	6.84E-04
48	GO:1900055: regulation of leaf senescence	6.84E-04
49	GO:0032784: regulation of DNA-templated transcription, elongation	6.84E-04
50	GO:0090630: activation of GTPase activity	6.84E-04
51	GO:2001289: lipid X metabolic process	9.77E-04
52	GO:0070301: cellular response to hydrogen peroxide	9.77E-04
53	GO:0072334: UDP-galactose transmembrane transport	9.77E-04
54	GO:0015749: monosaccharide transport	9.77E-04
55	GO:0009399: nitrogen fixation	9.77E-04
56	GO:0010116: positive regulation of abscisic acid biosynthetic process	9.77E-04
57	GO:0048367: shoot system development	1.28E-03
58	GO:0033320: UDP-D-xylose biosynthetic process	1.29E-03
59	GO:0010107: potassium ion import	1.29E-03
60	GO:0006542: glutamine biosynthetic process	1.29E-03
61	GO:0009687: abscisic acid metabolic process	1.29E-03
62	GO:0046323: glucose import	1.44E-03
63	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.45E-03
64	GO:0010225: response to UV-C	1.65E-03
65	GO:0006090: pyruvate metabolic process	1.65E-03
66	GO:0005513: detection of calcium ion	1.65E-03
67	GO:0019252: starch biosynthetic process	1.65E-03
68	GO:0007029: endoplasmic reticulum organization	1.65E-03
69	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.03E-03
70	GO:0048232: male gamete generation	2.03E-03
71	GO:0043248: proteasome assembly	2.03E-03
72	GO:0042732: D-xylose metabolic process	2.03E-03
73	GO:1900425: negative regulation of defense response to bacterium	2.03E-03
74	GO:0010337: regulation of salicylic acid metabolic process	2.03E-03
75	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.03E-03
76	GO:0048827: phyllome development	2.03E-03
77	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.43E-03
78	GO:0009612: response to mechanical stimulus	2.43E-03
79	GO:0048280: vesicle fusion with Golgi apparatus	2.43E-03
80	GO:0006955: immune response	2.87E-03
81	GO:0006333: chromatin assembly or disassembly	2.87E-03
82	GO:1902074: response to salt	2.87E-03
83	GO:0010150: leaf senescence	3.09E-03
84	GO:0009819: drought recovery	3.32E-03
85	GO:1900150: regulation of defense response to fungus	3.32E-03
86	GO:0010078: maintenance of root meristem identity	3.32E-03
87	GO:2000070: regulation of response to water deprivation	3.32E-03
88	GO:0010311: lateral root formation	3.47E-03
89	GO:0006499: N-terminal protein myristoylation	3.64E-03
90	GO:0006470: protein dephosphorylation	3.66E-03
91	GO:0030968: endoplasmic reticulum unfolded protein response	3.80E-03
92	GO:0043562: cellular response to nitrogen levels	3.80E-03
93	GO:0009808: lignin metabolic process	3.80E-03
94	GO:0009051: pentose-phosphate shunt, oxidative branch	4.30E-03
95	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.82E-03
96	GO:0008202: steroid metabolic process	4.82E-03
97	GO:0006897: endocytosis	4.97E-03
98	GO:0010629: negative regulation of gene expression	5.36E-03
99	GO:0006896: Golgi to vacuole transport	5.36E-03
100	GO:0007064: mitotic sister chromatid cohesion	5.36E-03
101	GO:0048829: root cap development	5.36E-03
102	GO:0010015: root morphogenesis	5.92E-03
103	GO:0000038: very long-chain fatty acid metabolic process	5.92E-03
104	GO:0071365: cellular response to auxin stimulus	6.51E-03
105	GO:0006108: malate metabolic process	7.11E-03
106	GO:0046777: protein autophosphorylation	7.70E-03
107	GO:0009933: meristem structural organization	7.73E-03
108	GO:0007034: vacuolar transport	7.73E-03
109	GO:0009225: nucleotide-sugar metabolic process	8.37E-03
110	GO:0010167: response to nitrate	8.37E-03
111	GO:0090351: seedling development	8.37E-03
112	GO:0010030: positive regulation of seed germination	8.37E-03
113	GO:0006096: glycolytic process	8.59E-03
114	GO:0009626: plant-type hypersensitive response	9.15E-03
115	GO:2000377: regulation of reactive oxygen species metabolic process	9.71E-03
116	GO:0009695: jasmonic acid biosynthetic process	1.04E-02
117	GO:0006825: copper ion transport	1.04E-02
118	GO:0046686: response to cadmium ion	1.05E-02
119	GO:0009742: brassinosteroid mediated signaling pathway	1.10E-02
120	GO:0031408: oxylipin biosynthetic process	1.11E-02
121	GO:0051260: protein homooligomerization	1.11E-02
122	GO:0030433: ubiquitin-dependent ERAD pathway	1.19E-02
123	GO:0007005: mitochondrion organization	1.19E-02
124	GO:0048364: root development	1.23E-02
125	GO:0071215: cellular response to abscisic acid stimulus	1.26E-02
126	GO:0071369: cellular response to ethylene stimulus	1.26E-02
127	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.42E-02
128	GO:0042147: retrograde transport, endosome to Golgi	1.42E-02
129	GO:0010118: stomatal movement	1.50E-02
130	GO:0042631: cellular response to water deprivation	1.50E-02
131	GO:0006885: regulation of pH	1.58E-02
132	GO:0010182: sugar mediated signaling pathway	1.58E-02
133	GO:0009873: ethylene-activated signaling pathway	1.61E-02
134	GO:0048544: recognition of pollen	1.66E-02
135	GO:0009414: response to water deprivation	1.67E-02
136	GO:0006623: protein targeting to vacuole	1.75E-02
137	GO:0009749: response to glucose	1.75E-02
138	GO:0071554: cell wall organization or biogenesis	1.83E-02
139	GO:0000302: response to reactive oxygen species	1.83E-02
140	GO:0006891: intra-Golgi vesicle-mediated transport	1.83E-02
141	GO:0010583: response to cyclopentenone	1.92E-02
142	GO:0009630: gravitropism	1.92E-02
143	GO:0071281: cellular response to iron ion	2.01E-02
144	GO:0006914: autophagy	2.10E-02
145	GO:0001666: response to hypoxia	2.38E-02
146	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.48E-02
147	GO:0010029: regulation of seed germination	2.48E-02
148	GO:0009816: defense response to bacterium, incompatible interaction	2.48E-02
149	GO:0035556: intracellular signal transduction	2.57E-02
150	GO:0042128: nitrate assimilation	2.58E-02
151	GO:0006888: ER to Golgi vesicle-mediated transport	2.67E-02
152	GO:0048573: photoperiodism, flowering	2.67E-02
153	GO:0006950: response to stress	2.67E-02
154	GO:0009826: unidimensional cell growth	2.68E-02
155	GO:0008219: cell death	2.88E-02
156	GO:0006970: response to osmotic stress	2.99E-02
157	GO:0010119: regulation of stomatal movement	3.19E-02
158	GO:0009723: response to ethylene	3.22E-02
159	GO:0016051: carbohydrate biosynthetic process	3.40E-02
160	GO:0006099: tricarboxylic acid cycle	3.51E-02
161	GO:0010200: response to chitin	3.56E-02
162	GO:0009651: response to salt stress	3.86E-02
163	GO:0045454: cell redox homeostasis	4.12E-02
164	GO:0006886: intracellular protein transport	4.24E-02
165	GO:0009636: response to toxic substance	4.43E-02
166	GO:0009965: leaf morphogenesis	4.43E-02
167	GO:0031347: regulation of defense response	4.67E-02
168	GO:0006812: cation transport	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
2	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
3	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
4	GO:0004846: urate oxidase activity	0.00E+00
5	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
6	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
7	GO:0004157: dihydropyrimidinase activity	0.00E+00
8	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
9	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
10	GO:0016301: kinase activity	3.65E-06
11	GO:0004674: protein serine/threonine kinase activity	3.83E-05
12	GO:0015145: monosaccharide transmembrane transporter activity	4.22E-05
13	GO:0004747: ribokinase activity	8.69E-05
14	GO:0008865: fructokinase activity	1.48E-04
15	GO:0009679: hexose:proton symporter activity	1.86E-04
16	GO:0015208: guanine transmembrane transporter activity	1.86E-04
17	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.86E-04
18	GO:0015294: solute:cation symporter activity	1.86E-04
19	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.86E-04
20	GO:0015207: adenine transmembrane transporter activity	1.86E-04
21	GO:0019707: protein-cysteine S-acyltransferase activity	1.86E-04
22	GO:0015168: glycerol transmembrane transporter activity	1.86E-04
23	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.86E-04
24	GO:0004743: pyruvate kinase activity	2.69E-04
25	GO:0030955: potassium ion binding	2.69E-04
26	GO:0015144: carbohydrate transmembrane transporter activity	4.14E-04
27	GO:0003988: acetyl-CoA C-acyltransferase activity	4.19E-04
28	GO:0004061: arylformamidase activity	4.19E-04
29	GO:0047209: coniferyl-alcohol glucosyltransferase activity	4.19E-04
30	GO:0004566: beta-glucuronidase activity	4.19E-04
31	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.78E-04
32	GO:0005351: sugar:proton symporter activity	4.98E-04
33	GO:0005524: ATP binding	5.34E-04
34	GO:0019829: cation-transporting ATPase activity	6.84E-04
35	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	6.84E-04
36	GO:0050833: pyruvate transmembrane transporter activity	6.84E-04
37	GO:0004383: guanylate cyclase activity	6.84E-04
38	GO:0016595: glutamate binding	6.84E-04
39	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	6.84E-04
40	GO:0005354: galactose transmembrane transporter activity	9.77E-04
41	GO:0001653: peptide receptor activity	9.77E-04
42	GO:0004108: citrate (Si)-synthase activity	9.77E-04
43	GO:0030527: structural constituent of chromatin	9.77E-04
44	GO:0004300: enoyl-CoA hydratase activity	9.77E-04
45	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.29E-03
46	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.29E-03
47	GO:0015210: uracil transmembrane transporter activity	1.29E-03
48	GO:0004470: malic enzyme activity	1.29E-03
49	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.29E-03
50	GO:0010294: abscisic acid glucosyltransferase activity	1.65E-03
51	GO:0005459: UDP-galactose transmembrane transporter activity	1.65E-03
52	GO:0008948: oxaloacetate decarboxylase activity	1.65E-03
53	GO:0017137: Rab GTPase binding	1.65E-03
54	GO:0004356: glutamate-ammonia ligase activity	1.65E-03
55	GO:0048040: UDP-glucuronate decarboxylase activity	2.03E-03
56	GO:0036402: proteasome-activating ATPase activity	2.03E-03
57	GO:0070403: NAD+ binding	2.43E-03
58	GO:0004012: phospholipid-translocating ATPase activity	2.43E-03
59	GO:0005096: GTPase activator activity	3.47E-03
60	GO:0008142: oxysterol binding	3.80E-03
61	GO:0005267: potassium channel activity	3.80E-03
62	GO:0005375: copper ion transmembrane transporter activity	3.80E-03
63	GO:0071949: FAD binding	4.30E-03
64	GO:0000287: magnesium ion binding	5.25E-03
65	GO:0004713: protein tyrosine kinase activity	5.36E-03
66	GO:0004177: aminopeptidase activity	5.92E-03
67	GO:0004521: endoribonuclease activity	6.51E-03
68	GO:0000976: transcription regulatory region sequence-specific DNA binding	6.51E-03
69	GO:0019888: protein phosphatase regulator activity	7.11E-03
70	GO:0017025: TBP-class protein binding	8.37E-03
71	GO:0004725: protein tyrosine phosphatase activity	9.03E-03
72	GO:0030246: carbohydrate binding	9.34E-03
73	GO:0080044: quercetin 7-O-glucosyltransferase activity	9.44E-03
74	GO:0080043: quercetin 3-O-glucosyltransferase activity	9.44E-03
75	GO:0004672: protein kinase activity	9.52E-03
76	GO:0043130: ubiquitin binding	9.71E-03
77	GO:0004722: protein serine/threonine phosphatase activity	1.00E-02
78	GO:0043424: protein histidine kinase binding	1.04E-02
79	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.11E-02
80	GO:0005515: protein binding	1.31E-02
81	GO:0005451: monovalent cation:proton antiporter activity	1.50E-02
82	GO:0015299: solute:proton antiporter activity	1.66E-02
83	GO:0005355: glucose transmembrane transporter activity	1.66E-02
84	GO:0010181: FMN binding	1.66E-02
85	GO:0004872: receptor activity	1.75E-02
86	GO:0008194: UDP-glycosyltransferase activity	2.01E-02
87	GO:0015385: sodium:proton antiporter activity	2.01E-02
88	GO:0016887: ATPase activity	2.02E-02
89	GO:0016791: phosphatase activity	2.10E-02
90	GO:0008483: transaminase activity	2.19E-02
91	GO:0016413: O-acetyltransferase activity	2.29E-02
92	GO:0051213: dioxygenase activity	2.38E-02
93	GO:0004721: phosphoprotein phosphatase activity	2.67E-02
94	GO:0030247: polysaccharide binding	2.67E-02
95	GO:0008236: serine-type peptidase activity	2.78E-02
96	GO:0003682: chromatin binding	2.94E-02
97	GO:0030145: manganese ion binding	3.19E-02
98	GO:0008233: peptidase activity	3.39E-02
99	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.40E-02
100	GO:0004497: monooxygenase activity	3.44E-02
101	GO:0000149: SNARE binding	3.63E-02
102	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.63E-02
103	GO:0005484: SNAP receptor activity	4.08E-02
104	GO:0051287: NAD binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0010009: cytoplasmic side of endosome membrane	0.00E+00
2	GO:0005886: plasma membrane	3.43E-08
3	GO:0016021: integral component of membrane	1.18E-05
4	GO:0005777: peroxisome	8.07E-05
5	GO:0005783: endoplasmic reticulum	1.55E-04
6	GO:0000138: Golgi trans cisterna	1.86E-04
7	GO:0005778: peroxisomal membrane	2.20E-04
8	GO:0005769: early endosome	6.69E-04
9	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.84E-04
10	GO:0005741: mitochondrial outer membrane	8.93E-04
11	GO:0005794: Golgi apparatus	1.39E-03
12	GO:0000164: protein phosphatase type 1 complex	1.65E-03
13	GO:0030140: trans-Golgi network transport vesicle	2.03E-03
14	GO:0005829: cytosol	2.03E-03
15	GO:0030173: integral component of Golgi membrane	2.43E-03
16	GO:0031597: cytosolic proteasome complex	2.43E-03
17	GO:0000815: ESCRT III complex	2.43E-03
18	GO:0016020: membrane	2.84E-03
19	GO:0031595: nuclear proteasome complex	2.87E-03
20	GO:0005789: endoplasmic reticulum membrane	3.05E-03
21	GO:0005802: trans-Golgi network	3.23E-03
22	GO:0030131: clathrin adaptor complex	3.32E-03
23	GO:0031305: integral component of mitochondrial inner membrane	3.32E-03
24	GO:0012507: ER to Golgi transport vesicle membrane	3.32E-03
25	GO:0009514: glyoxysome	3.80E-03
26	GO:0005779: integral component of peroxisomal membrane	3.80E-03
27	GO:0005768: endosome	4.05E-03
28	GO:0031901: early endosome membrane	4.30E-03
29	GO:0008540: proteasome regulatory particle, base subcomplex	4.82E-03
30	GO:0031902: late endosome membrane	4.97E-03
31	GO:0030125: clathrin vesicle coat	5.36E-03
32	GO:0005765: lysosomal membrane	5.92E-03
33	GO:0048471: perinuclear region of cytoplasm	5.92E-03
34	GO:0016602: CCAAT-binding factor complex	7.11E-03
35	GO:0030176: integral component of endoplasmic reticulum membrane	8.37E-03
36	GO:0012505: endomembrane system	1.00E-02
37	GO:0005905: clathrin-coated pit	1.11E-02
38	GO:0005770: late endosome	1.58E-02
39	GO:0000785: chromatin	1.92E-02
40	GO:0000151: ubiquitin ligase complex	2.88E-02
41	GO:0000325: plant-type vacuole	3.19E-02
42	GO:0000786: nucleosome	3.30E-02
43	GO:0005773: vacuole	3.35E-02
44	GO:0031201: SNARE complex	3.85E-02
45	GO:0005774: vacuolar membrane	4.06E-02