Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905421: regulation of plant organ morphogenesis0.00E+00
2GO:0030155: regulation of cell adhesion0.00E+00
3GO:0033231: carbohydrate export0.00E+00
4GO:0010480: microsporocyte differentiation4.18E-05
5GO:1902458: positive regulation of stomatal opening4.18E-05
6GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway4.18E-05
7GO:1902334: fructose export from vacuole to cytoplasm4.18E-05
8GO:0015755: fructose transport4.18E-05
9GO:1903426: regulation of reactive oxygen species biosynthetic process1.04E-04
10GO:0048281: inflorescence morphogenesis1.78E-04
11GO:0007623: circadian rhythm2.43E-04
12GO:0080170: hydrogen peroxide transmembrane transport2.63E-04
13GO:0043481: anthocyanin accumulation in tissues in response to UV light2.63E-04
14GO:0010148: transpiration2.63E-04
15GO:0045038: protein import into chloroplast thylakoid membrane4.50E-04
16GO:0006086: acetyl-CoA biosynthetic process from pyruvate5.51E-04
17GO:0010315: auxin efflux5.51E-04
18GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.90E-04
19GO:0015979: photosynthesis6.66E-04
20GO:0070370: cellular heat acclimation7.69E-04
21GO:0010444: guard mother cell differentiation7.69E-04
22GO:0010103: stomatal complex morphogenesis7.69E-04
23GO:0009395: phospholipid catabolic process7.69E-04
24GO:0048437: floral organ development7.69E-04
25GO:0030091: protein repair8.84E-04
26GO:2000070: regulation of response to water deprivation8.84E-04
27GO:0031540: regulation of anthocyanin biosynthetic process8.84E-04
28GO:0001558: regulation of cell growth1.00E-03
29GO:0010205: photoinhibition1.25E-03
30GO:0006995: cellular response to nitrogen starvation1.39E-03
31GO:0009750: response to fructose1.53E-03
32GO:0048229: gametophyte development1.53E-03
33GO:0009773: photosynthetic electron transport in photosystem I1.53E-03
34GO:0008361: regulation of cell size1.67E-03
35GO:0016024: CDP-diacylglycerol biosynthetic process1.67E-03
36GO:0010229: inflorescence development1.82E-03
37GO:0050826: response to freezing1.82E-03
38GO:0009718: anthocyanin-containing compound biosynthetic process1.82E-03
39GO:0010075: regulation of meristem growth1.82E-03
40GO:0009725: response to hormone1.82E-03
41GO:0010207: photosystem II assembly1.97E-03
42GO:0009934: regulation of meristem structural organization1.97E-03
43GO:0048467: gynoecium development1.97E-03
44GO:0071732: cellular response to nitric oxide2.13E-03
45GO:0010030: positive regulation of seed germination2.13E-03
46GO:0006633: fatty acid biosynthetic process2.21E-03
47GO:0010025: wax biosynthetic process2.29E-03
48GO:0042023: DNA endoreduplication2.29E-03
49GO:0006833: water transport2.29E-03
50GO:0009944: polarity specification of adaxial/abaxial axis2.46E-03
51GO:0055085: transmembrane transport2.52E-03
52GO:0051302: regulation of cell division2.62E-03
53GO:0051260: protein homooligomerization2.80E-03
54GO:0071369: cellular response to ethylene stimulus3.15E-03
55GO:0001944: vasculature development3.15E-03
56GO:0009306: protein secretion3.33E-03
57GO:0048443: stamen development3.33E-03
58GO:0070417: cellular response to cold3.52E-03
59GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.52E-03
60GO:0034220: ion transmembrane transport3.71E-03
61GO:0048653: anther development3.71E-03
62GO:0042631: cellular response to water deprivation3.71E-03
63GO:0009958: positive gravitropism3.91E-03
64GO:0009646: response to absence of light4.11E-03
65GO:0000302: response to reactive oxygen species4.51E-03
66GO:0071281: cellular response to iron ion4.93E-03
67GO:0009639: response to red or far red light5.15E-03
68GO:0010252: auxin homeostasis5.15E-03
69GO:0015995: chlorophyll biosynthetic process6.50E-03
70GO:0006629: lipid metabolic process6.79E-03
71GO:0000160: phosphorelay signal transduction system7.22E-03
72GO:0009637: response to blue light8.23E-03
73GO:0034599: cellular response to oxidative stress8.48E-03
74GO:0008283: cell proliferation9.82E-03
75GO:0009926: auxin polar transport9.82E-03
76GO:0009744: response to sucrose9.82E-03
77GO:0009640: photomorphogenesis9.82E-03
78GO:0009965: leaf morphogenesis1.07E-02
79GO:0009735: response to cytokinin1.10E-02
80GO:0009664: plant-type cell wall organization1.15E-02
81GO:0009736: cytokinin-activated signaling pathway1.21E-02
82GO:0006096: glycolytic process1.36E-02
83GO:0009624: response to nematode1.55E-02
84GO:0006468: protein phosphorylation1.77E-02
85GO:0042744: hydrogen peroxide catabolic process2.00E-02
86GO:0006979: response to oxidative stress2.47E-02
87GO:0009733: response to auxin2.75E-02
88GO:0009409: response to cold3.32E-02
89GO:0080167: response to karrikin3.65E-02
90GO:0005975: carbohydrate metabolic process3.71E-02
91GO:0045454: cell redox homeostasis4.15E-02
92GO:0006869: lipid transport4.43E-02
93GO:0016042: lipid catabolic process4.71E-02
RankGO TermAdjusted P value
1GO:0015284: fructose uniporter activity0.00E+00
2GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
3GO:0005353: fructose transmembrane transporter activity1.04E-04
4GO:0009977: proton motive force dependent protein transmembrane transporter activity1.04E-04
5GO:0004872: receptor activity2.36E-04
6GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.63E-04
7GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.34E-04
8GO:0042277: peptide binding3.53E-04
9GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity3.53E-04
10GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity3.53E-04
11GO:0010328: auxin influx transmembrane transporter activity3.53E-04
12GO:0019199: transmembrane receptor protein kinase activity3.53E-04
13GO:0045300: acyl-[acyl-carrier-protein] desaturase activity4.50E-04
14GO:0004130: cytochrome-c peroxidase activity5.51E-04
15GO:0042578: phosphoric ester hydrolase activity5.51E-04
16GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.58E-04
17GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.13E-03
18GO:0004864: protein phosphatase inhibitor activity1.39E-03
19GO:0047372: acylglycerol lipase activity1.53E-03
20GO:0004565: beta-galactosidase activity1.82E-03
21GO:0010329: auxin efflux transmembrane transporter activity1.82E-03
22GO:0051119: sugar transmembrane transporter activity2.13E-03
23GO:0033612: receptor serine/threonine kinase binding2.80E-03
24GO:0005515: protein binding3.30E-03
25GO:0016788: hydrolase activity, acting on ester bonds3.80E-03
26GO:0004518: nuclease activity4.72E-03
27GO:0000156: phosphorelay response regulator activity4.93E-03
28GO:0016597: amino acid binding5.59E-03
29GO:0015250: water channel activity5.81E-03
30GO:0030145: manganese ion binding7.72E-03
31GO:0003993: acid phosphatase activity8.48E-03
32GO:0031625: ubiquitin protein ligase binding1.30E-02
33GO:0016746: transferase activity, transferring acyl groups1.59E-02
34GO:0003743: translation initiation factor activity2.56E-02
35GO:0042802: identical protein binding2.72E-02
36GO:0004601: peroxidase activity3.13E-02
37GO:0004674: protein serine/threonine kinase activity3.40E-02
38GO:0003729: mRNA binding3.64E-02
39GO:0061630: ubiquitin protein ligase activity3.78E-02
40GO:0052689: carboxylic ester hydrolase activity3.92E-02
41GO:0042803: protein homodimerization activity4.29E-02
RankGO TermAdjusted P value
1GO:0010240: plastid pyruvate dehydrogenase complex0.00E+00
2GO:0009534: chloroplast thylakoid2.63E-06
3GO:0009507: chloroplast8.89E-06
4GO:0009535: chloroplast thylakoid membrane1.07E-05
5GO:0033281: TAT protein transport complex1.78E-04
6GO:0009579: thylakoid3.62E-04
7GO:0031977: thylakoid lumen7.08E-04
8GO:0009533: chloroplast stromal thylakoid7.69E-04
9GO:0016021: integral component of membrane1.37E-03
10GO:0009543: chloroplast thylakoid lumen1.77E-03
11GO:0030095: chloroplast photosystem II1.97E-03
12GO:0009654: photosystem II oxygen evolving complex2.62E-03
13GO:0009570: chloroplast stroma3.69E-03
14GO:0009523: photosystem II4.31E-03
15GO:0019898: extrinsic component of membrane4.31E-03
16GO:0000151: ubiquitin ligase complex6.98E-03
17GO:0009941: chloroplast envelope8.37E-03
18GO:0005886: plasma membrane9.88E-03
19GO:0010287: plastoglobule1.76E-02
20GO:0005623: cell1.86E-02
21GO:0009705: plant-type vacuole membrane2.29E-02
22GO:0031969: chloroplast membrane3.65E-02
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Gene type



Gene DE type