Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042906: xanthine transport0.00E+00
2GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity0.00E+00
3GO:0015857: uracil transport3.42E-05
4GO:0015720: allantoin transport3.42E-05
5GO:0071705: nitrogen compound transport6.16E-05
6GO:0006624: vacuolar protein processing9.36E-05
7GO:0006646: phosphatidylethanolamine biosynthetic process1.30E-04
8GO:0000380: alternative mRNA splicing, via spliceosome1.68E-04
9GO:0043097: pyrimidine nucleoside salvage1.68E-04
10GO:0006206: pyrimidine nucleobase metabolic process2.10E-04
11GO:0006333: chromatin assembly or disassembly2.99E-04
12GO:0098869: cellular oxidant detoxification2.99E-04
13GO:0009061: anaerobic respiration3.46E-04
14GO:0010345: suberin biosynthetic process4.45E-04
15GO:0010143: cutin biosynthetic process7.72E-04
16GO:0010025: wax biosynthetic process8.91E-04
17GO:0008299: isoprenoid biosynthetic process1.01E-03
18GO:0016575: histone deacetylation1.01E-03
19GO:0030433: ubiquitin-dependent ERAD pathway1.14E-03
20GO:0080022: primary root development1.41E-03
21GO:0042335: cuticle development1.41E-03
22GO:0008360: regulation of cell shape1.48E-03
23GO:0008654: phospholipid biosynthetic process1.63E-03
24GO:0009737: response to abscisic acid1.83E-03
25GO:0001666: response to hypoxia2.18E-03
26GO:0006950: response to stress2.43E-03
27GO:0010043: response to zinc ion2.87E-03
28GO:0035556: intracellular signal transduction2.98E-03
29GO:0045087: innate immune response3.05E-03
30GO:0016051: carbohydrate biosynthetic process3.05E-03
31GO:0009651: response to salt stress3.24E-03
32GO:0042542: response to hydrogen peroxide3.53E-03
33GO:0000165: MAPK cascade4.13E-03
34GO:0051603: proteolysis involved in cellular protein catabolic process4.55E-03
35GO:0006979: response to oxidative stress5.72E-03
36GO:0018105: peptidyl-serine phosphorylation5.77E-03
37GO:0009058: biosynthetic process6.85E-03
38GO:0009409: response to cold7.68E-03
39GO:0007623: circadian rhythm8.26E-03
40GO:0010150: leaf senescence8.26E-03
41GO:0010468: regulation of gene expression9.35E-03
42GO:0006970: response to osmotic stress1.18E-02
43GO:0009723: response to ethylene1.24E-02
44GO:0009751: response to salicylic acid1.70E-02
45GO:0009408: response to heat1.72E-02
46GO:0009753: response to jasmonic acid1.81E-02
47GO:0009735: response to cytokinin2.43E-02
48GO:0009611: response to wounding2.63E-02
49GO:0009414: response to water deprivation4.21E-02
50GO:0006468: protein phosphorylation4.40E-02
RankGO TermAdjusted P value
1GO:0042907: xanthine transmembrane transporter activity0.00E+00
2GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity1.30E-05
3GO:0005274: allantoin uptake transmembrane transporter activity3.42E-05
4GO:0004609: phosphatidylserine decarboxylase activity3.42E-05
5GO:0030527: structural constituent of chromatin9.36E-05
6GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway1.30E-04
7GO:0004737: pyruvate decarboxylase activity1.30E-04
8GO:0015210: uracil transmembrane transporter activity1.30E-04
9GO:0030976: thiamine pyrophosphate binding2.10E-04
10GO:0004849: uridine kinase activity2.53E-04
11GO:0004602: glutathione peroxidase activity2.53E-04
12GO:0070300: phosphatidic acid binding2.53E-04
13GO:0016831: carboxy-lyase activity2.99E-04
14GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.94E-04
15GO:0004175: endopeptidase activity7.72E-04
16GO:0004407: histone deacetylase activity9.51E-04
17GO:0004707: MAP kinase activity1.08E-03
18GO:0004197: cysteine-type endopeptidase activity1.78E-03
19GO:0008375: acetylglucosaminyltransferase activity2.35E-03
20GO:0016874: ligase activity5.43E-03
21GO:0016301: kinase activity5.97E-03
22GO:0000287: magnesium ion binding1.11E-02
23GO:0003682: chromatin binding1.17E-02
24GO:0005524: ATP binding2.19E-02
25GO:0004674: protein serine/threonine kinase activity2.81E-02
26GO:0016740: transferase activity2.99E-02
27GO:0005509: calcium ion binding4.05E-02
28GO:0003677: DNA binding4.38E-02
RankGO TermAdjusted P value
1GO:0000323: lytic vacuole9.36E-05
2GO:0030176: integral component of endoplasmic reticulum membrane8.32E-04
3GO:0000785: chromatin1.78E-03
4GO:0005829: cytosol3.42E-03
5GO:0005834: heterotrimeric G-protein complex5.20E-03
6GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.20E-02
7GO:0005737: cytoplasm1.84E-02
8GO:0048046: apoplast2.07E-02
9GO:0005777: peroxisome2.86E-02
10GO:0005783: endoplasmic reticulum3.98E-02
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Gene type



Gene DE type