GO Enrichment Analysis of Co-expressed Genes with
AT4G38970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 4 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 5 | GO:0006546: glycine catabolic process | 1.09E-08 |
| 6 | GO:0019253: reductive pentose-phosphate cycle | 2.41E-06 |
| 7 | GO:0019676: ammonia assimilation cycle | 4.96E-06 |
| 8 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.96E-06 |
| 9 | GO:0000066: mitochondrial ornithine transport | 7.07E-05 |
| 10 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 7.07E-05 |
| 11 | GO:0000038: very long-chain fatty acid metabolic process | 9.12E-05 |
| 12 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.12E-05 |
| 13 | GO:0009744: response to sucrose | 1.19E-04 |
| 14 | GO:0010167: response to nitrate | 1.59E-04 |
| 15 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.70E-04 |
| 16 | GO:0097054: L-glutamate biosynthetic process | 1.70E-04 |
| 17 | GO:0006000: fructose metabolic process | 2.86E-04 |
| 18 | GO:0006696: ergosterol biosynthetic process | 2.86E-04 |
| 19 | GO:0042631: cellular response to water deprivation | 3.77E-04 |
| 20 | GO:0042335: cuticle development | 3.77E-04 |
| 21 | GO:0006537: glutamate biosynthetic process | 4.15E-04 |
| 22 | GO:0032877: positive regulation of DNA endoreduplication | 4.15E-04 |
| 23 | GO:0045727: positive regulation of translation | 5.53E-04 |
| 24 | GO:0031122: cytoplasmic microtubule organization | 5.53E-04 |
| 25 | GO:0006542: glutamine biosynthetic process | 5.53E-04 |
| 26 | GO:0010090: trichome morphogenesis | 5.67E-04 |
| 27 | GO:0043097: pyrimidine nucleoside salvage | 7.00E-04 |
| 28 | GO:0046785: microtubule polymerization | 7.00E-04 |
| 29 | GO:0016126: sterol biosynthetic process | 7.13E-04 |
| 30 | GO:0042128: nitrate assimilation | 7.93E-04 |
| 31 | GO:0070814: hydrogen sulfide biosynthetic process | 8.57E-04 |
| 32 | GO:0006206: pyrimidine nucleobase metabolic process | 8.57E-04 |
| 33 | GO:0009635: response to herbicide | 8.57E-04 |
| 34 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.02E-03 |
| 35 | GO:0017148: negative regulation of translation | 1.02E-03 |
| 36 | GO:0009854: oxidative photosynthetic carbon pathway | 1.02E-03 |
| 37 | GO:0009853: photorespiration | 1.15E-03 |
| 38 | GO:0016051: carbohydrate biosynthetic process | 1.15E-03 |
| 39 | GO:0010196: nonphotochemical quenching | 1.19E-03 |
| 40 | GO:0006839: mitochondrial transport | 1.30E-03 |
| 41 | GO:0006875: cellular metal ion homeostasis | 1.37E-03 |
| 42 | GO:0009850: auxin metabolic process | 1.37E-03 |
| 43 | GO:0006002: fructose 6-phosphate metabolic process | 1.56E-03 |
| 44 | GO:0071482: cellular response to light stimulus | 1.56E-03 |
| 45 | GO:0032544: plastid translation | 1.56E-03 |
| 46 | GO:0010192: mucilage biosynthetic process | 2.19E-03 |
| 47 | GO:0009970: cellular response to sulfate starvation | 2.19E-03 |
| 48 | GO:0019538: protein metabolic process | 2.19E-03 |
| 49 | GO:0000103: sulfate assimilation | 2.19E-03 |
| 50 | GO:0042742: defense response to bacterium | 2.30E-03 |
| 51 | GO:0006096: glycolytic process | 2.31E-03 |
| 52 | GO:0009773: photosynthetic electron transport in photosystem I | 2.41E-03 |
| 53 | GO:0006415: translational termination | 2.41E-03 |
| 54 | GO:0000272: polysaccharide catabolic process | 2.41E-03 |
| 55 | GO:0045037: protein import into chloroplast stroma | 2.64E-03 |
| 56 | GO:0015706: nitrate transport | 2.64E-03 |
| 57 | GO:0009725: response to hormone | 2.88E-03 |
| 58 | GO:0006094: gluconeogenesis | 2.88E-03 |
| 59 | GO:0005986: sucrose biosynthetic process | 2.88E-03 |
| 60 | GO:0006006: glucose metabolic process | 2.88E-03 |
| 61 | GO:0009969: xyloglucan biosynthetic process | 3.37E-03 |
| 62 | GO:0006833: water transport | 3.63E-03 |
| 63 | GO:0009833: plant-type primary cell wall biogenesis | 3.63E-03 |
| 64 | GO:0009409: response to cold | 3.64E-03 |
| 65 | GO:0006810: transport | 4.12E-03 |
| 66 | GO:0005975: carbohydrate metabolic process | 4.33E-03 |
| 67 | GO:0006633: fatty acid biosynthetic process | 4.34E-03 |
| 68 | GO:0009416: response to light stimulus | 4.46E-03 |
| 69 | GO:0006730: one-carbon metabolic process | 4.73E-03 |
| 70 | GO:0080092: regulation of pollen tube growth | 4.73E-03 |
| 71 | GO:0009294: DNA mediated transformation | 5.02E-03 |
| 72 | GO:0016117: carotenoid biosynthetic process | 5.62E-03 |
| 73 | GO:0000271: polysaccharide biosynthetic process | 5.93E-03 |
| 74 | GO:0034220: ion transmembrane transport | 5.93E-03 |
| 75 | GO:0045489: pectin biosynthetic process | 6.24E-03 |
| 76 | GO:0019252: starch biosynthetic process | 6.89E-03 |
| 77 | GO:0010583: response to cyclopentenone | 7.56E-03 |
| 78 | GO:1901657: glycosyl compound metabolic process | 7.90E-03 |
| 79 | GO:0007049: cell cycle | 8.22E-03 |
| 80 | GO:0080167: response to karrikin | 9.13E-03 |
| 81 | GO:0010027: thylakoid membrane organization | 9.34E-03 |
| 82 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 9.71E-03 |
| 83 | GO:0015979: photosynthesis | 1.04E-02 |
| 84 | GO:0071555: cell wall organization | 1.09E-02 |
| 85 | GO:0030244: cellulose biosynthetic process | 1.13E-02 |
| 86 | GO:0009832: plant-type cell wall biogenesis | 1.17E-02 |
| 87 | GO:0055114: oxidation-reduction process | 1.22E-02 |
| 88 | GO:0007568: aging | 1.25E-02 |
| 89 | GO:0046686: response to cadmium ion | 1.91E-02 |
| 90 | GO:0006364: rRNA processing | 1.97E-02 |
| 91 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.01E-02 |
| 92 | GO:0006857: oligopeptide transport | 2.06E-02 |
| 93 | GO:0009735: response to cytokinin | 2.20E-02 |
| 94 | GO:0048367: shoot system development | 2.26E-02 |
| 95 | GO:0051726: regulation of cell cycle | 2.63E-02 |
| 96 | GO:0009742: brassinosteroid mediated signaling pathway | 2.63E-02 |
| 97 | GO:0055085: transmembrane transport | 3.05E-02 |
| 98 | GO:0009058: biosynthetic process | 3.08E-02 |
| 99 | GO:0007623: circadian rhythm | 3.73E-02 |
| 100 | GO:0010468: regulation of gene expression | 4.23E-02 |
| 101 | GO:0009617: response to bacterium | 4.23E-02 |
| 102 | GO:0009414: response to water deprivation | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 4 | GO:0008447: L-ascorbate oxidase activity | 0.00E+00 |
| 5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 6 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 7 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 8 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 9 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 10 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 11 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 12 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.59E-06 |
| 13 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 7.07E-05 |
| 14 | GO:0008252: nucleotidase activity | 7.07E-05 |
| 15 | GO:0051996: squalene synthase activity | 7.07E-05 |
| 16 | GO:0010313: phytochrome binding | 7.07E-05 |
| 17 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 7.07E-05 |
| 18 | GO:0008568: microtubule-severing ATPase activity | 7.07E-05 |
| 19 | GO:0015088: copper uptake transmembrane transporter activity | 7.07E-05 |
| 20 | GO:0016041: glutamate synthase (ferredoxin) activity | 7.07E-05 |
| 21 | GO:0010297: heteropolysaccharide binding | 1.70E-04 |
| 22 | GO:0004047: aminomethyltransferase activity | 1.70E-04 |
| 23 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.70E-04 |
| 24 | GO:0000064: L-ornithine transmembrane transporter activity | 1.70E-04 |
| 25 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.70E-04 |
| 26 | GO:0008967: phosphoglycolate phosphatase activity | 1.70E-04 |
| 27 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.70E-04 |
| 28 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.79E-04 |
| 29 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.79E-04 |
| 30 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.79E-04 |
| 31 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 2.86E-04 |
| 32 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 4.15E-04 |
| 33 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.15E-04 |
| 34 | GO:0000254: C-4 methylsterol oxidase activity | 4.15E-04 |
| 35 | GO:0048027: mRNA 5'-UTR binding | 4.15E-04 |
| 36 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.15E-04 |
| 37 | GO:0051538: 3 iron, 4 sulfur cluster binding | 7.00E-04 |
| 38 | GO:0004356: glutamate-ammonia ligase activity | 7.00E-04 |
| 39 | GO:0042578: phosphoric ester hydrolase activity | 8.57E-04 |
| 40 | GO:0000210: NAD+ diphosphatase activity | 8.57E-04 |
| 41 | GO:0051753: mannan synthase activity | 1.02E-03 |
| 42 | GO:0004849: uridine kinase activity | 1.02E-03 |
| 43 | GO:0003747: translation release factor activity | 1.76E-03 |
| 44 | GO:0051287: NAD binding | 1.77E-03 |
| 45 | GO:0015112: nitrate transmembrane transporter activity | 1.97E-03 |
| 46 | GO:0005381: iron ion transmembrane transporter activity | 1.97E-03 |
| 47 | GO:0047372: acylglycerol lipase activity | 2.41E-03 |
| 48 | GO:0004860: protein kinase inhibitor activity | 2.41E-03 |
| 49 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.41E-03 |
| 50 | GO:0008378: galactosyltransferase activity | 2.64E-03 |
| 51 | GO:0003824: catalytic activity | 2.65E-03 |
| 52 | GO:0004565: beta-galactosidase activity | 2.88E-03 |
| 53 | GO:0004089: carbonate dehydratase activity | 2.88E-03 |
| 54 | GO:0008266: poly(U) RNA binding | 3.12E-03 |
| 55 | GO:0016758: transferase activity, transferring hexosyl groups | 3.37E-03 |
| 56 | GO:0019843: rRNA binding | 3.46E-03 |
| 57 | GO:0016757: transferase activity, transferring glycosyl groups | 3.98E-03 |
| 58 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 4.73E-03 |
| 59 | GO:0016760: cellulose synthase (UDP-forming) activity | 5.02E-03 |
| 60 | GO:0022891: substrate-specific transmembrane transporter activity | 5.02E-03 |
| 61 | GO:0008080: N-acetyltransferase activity | 6.24E-03 |
| 62 | GO:0050662: coenzyme binding | 6.56E-03 |
| 63 | GO:0019901: protein kinase binding | 6.89E-03 |
| 64 | GO:0004872: receptor activity | 6.89E-03 |
| 65 | GO:0004518: nuclease activity | 7.56E-03 |
| 66 | GO:0016759: cellulose synthase activity | 8.25E-03 |
| 67 | GO:0008483: transaminase activity | 8.61E-03 |
| 68 | GO:0015250: water channel activity | 9.34E-03 |
| 69 | GO:0016168: chlorophyll binding | 9.71E-03 |
| 70 | GO:0102483: scopolin beta-glucosidase activity | 1.05E-02 |
| 71 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.21E-02 |
| 72 | GO:0003993: acid phosphatase activity | 1.37E-02 |
| 73 | GO:0008422: beta-glucosidase activity | 1.41E-02 |
| 74 | GO:0050661: NADP binding | 1.46E-02 |
| 75 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.46E-02 |
| 76 | GO:0004185: serine-type carboxypeptidase activity | 1.59E-02 |
| 77 | GO:0015293: symporter activity | 1.73E-02 |
| 78 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.37E-02 |
| 79 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.37E-02 |
| 80 | GO:0004650: polygalacturonase activity | 2.37E-02 |
| 81 | GO:0030246: carbohydrate binding | 3.23E-02 |
| 82 | GO:0005507: copper ion binding | 3.42E-02 |
| 83 | GO:0008017: microtubule binding | 3.85E-02 |
| 84 | GO:0008194: UDP-glycosyltransferase activity | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048046: apoplast | 5.47E-10 |
| 2 | GO:0009570: chloroplast stroma | 1.78E-08 |
| 3 | GO:0009507: chloroplast | 1.06E-07 |
| 4 | GO:0005960: glycine cleavage complex | 2.59E-06 |
| 5 | GO:0009941: chloroplast envelope | 2.84E-06 |
| 6 | GO:0010319: stromule | 3.12E-05 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 8.62E-05 |
| 8 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.70E-04 |
| 9 | GO:0045254: pyruvate dehydrogenase complex | 1.70E-04 |
| 10 | GO:0009579: thylakoid | 1.73E-04 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 5.53E-04 |
| 12 | GO:0031897: Tic complex | 5.53E-04 |
| 13 | GO:0009534: chloroplast thylakoid | 1.05E-03 |
| 14 | GO:0016020: membrane | 1.30E-03 |
| 15 | GO:0009539: photosystem II reaction center | 1.56E-03 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.76E-03 |
| 17 | GO:0055028: cortical microtubule | 2.19E-03 |
| 18 | GO:0016324: apical plasma membrane | 2.19E-03 |
| 19 | GO:0010287: plastoglobule | 3.28E-03 |
| 20 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.37E-03 |
| 21 | GO:0005794: Golgi apparatus | 3.48E-03 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 4.17E-03 |
| 23 | GO:0005759: mitochondrial matrix | 4.34E-03 |
| 24 | GO:0046658: anchored component of plasma membrane | 6.30E-03 |
| 25 | GO:0009523: photosystem II | 6.89E-03 |
| 26 | GO:0031969: chloroplast membrane | 9.13E-03 |
| 27 | GO:0005743: mitochondrial inner membrane | 1.26E-02 |
| 28 | GO:0009505: plant-type cell wall | 1.45E-02 |
| 29 | GO:0022626: cytosolic ribosome | 2.30E-02 |
| 30 | GO:0009706: chloroplast inner membrane | 2.53E-02 |
| 31 | GO:0005777: peroxisome | 2.76E-02 |
| 32 | GO:0016021: integral component of membrane | 2.83E-02 |
| 33 | GO:0031225: anchored component of membrane | 3.74E-02 |
| 34 | GO:0005615: extracellular space | 4.04E-02 |