GO Enrichment Analysis of Co-expressed Genes with
AT4G38850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 5.54E-06 |
| 4 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.61E-05 |
| 5 | GO:0000476: maturation of 4.5S rRNA | 2.53E-05 |
| 6 | GO:0000967: rRNA 5'-end processing | 2.53E-05 |
| 7 | GO:0015790: UDP-xylose transport | 6.44E-05 |
| 8 | GO:0034470: ncRNA processing | 6.44E-05 |
| 9 | GO:0009765: photosynthesis, light harvesting | 2.30E-04 |
| 10 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.65E-04 |
| 11 | GO:0009228: thiamine biosynthetic process | 3.65E-04 |
| 12 | GO:0010114: response to red light | 4.15E-04 |
| 13 | GO:0009645: response to low light intensity stimulus | 5.11E-04 |
| 14 | GO:0009769: photosynthesis, light harvesting in photosystem II | 5.11E-04 |
| 15 | GO:0050829: defense response to Gram-negative bacterium | 5.11E-04 |
| 16 | GO:0009664: plant-type cell wall organization | 5.19E-04 |
| 17 | GO:0009642: response to light intensity | 5.89E-04 |
| 18 | GO:0046620: regulation of organ growth | 5.89E-04 |
| 19 | GO:0009734: auxin-activated signaling pathway | 6.32E-04 |
| 20 | GO:0009657: plastid organization | 6.69E-04 |
| 21 | GO:0006783: heme biosynthetic process | 7.52E-04 |
| 22 | GO:0009245: lipid A biosynthetic process | 7.52E-04 |
| 23 | GO:0006779: porphyrin-containing compound biosynthetic process | 8.38E-04 |
| 24 | GO:0007275: multicellular organism development | 8.43E-04 |
| 25 | GO:0006949: syncytium formation | 9.24E-04 |
| 26 | GO:0043085: positive regulation of catalytic activity | 1.01E-03 |
| 27 | GO:0009698: phenylpropanoid metabolic process | 1.01E-03 |
| 28 | GO:0010030: positive regulation of seed germination | 1.40E-03 |
| 29 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.72E-03 |
| 30 | GO:0007017: microtubule-based process | 1.72E-03 |
| 31 | GO:0016114: terpenoid biosynthetic process | 1.83E-03 |
| 32 | GO:0009269: response to desiccation | 1.83E-03 |
| 33 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.06E-03 |
| 34 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.30E-03 |
| 35 | GO:0009733: response to auxin | 2.33E-03 |
| 36 | GO:0042631: cellular response to water deprivation | 2.42E-03 |
| 37 | GO:0042335: cuticle development | 2.42E-03 |
| 38 | GO:0006662: glycerol ether metabolic process | 2.55E-03 |
| 39 | GO:0015979: photosynthesis | 2.80E-03 |
| 40 | GO:0010193: response to ozone | 2.94E-03 |
| 41 | GO:0009828: plant-type cell wall loosening | 3.34E-03 |
| 42 | GO:0009627: systemic acquired resistance | 4.06E-03 |
| 43 | GO:0018298: protein-chromophore linkage | 4.52E-03 |
| 44 | GO:0010218: response to far red light | 4.83E-03 |
| 45 | GO:0009637: response to blue light | 5.31E-03 |
| 46 | GO:0034599: cellular response to oxidative stress | 5.47E-03 |
| 47 | GO:0009735: response to cytokinin | 5.83E-03 |
| 48 | GO:0009926: auxin polar transport | 6.32E-03 |
| 49 | GO:0009416: response to light stimulus | 6.37E-03 |
| 50 | GO:0009644: response to high light intensity | 6.67E-03 |
| 51 | GO:0008643: carbohydrate transport | 6.67E-03 |
| 52 | GO:0010224: response to UV-B | 7.97E-03 |
| 53 | GO:0006417: regulation of translation | 8.35E-03 |
| 54 | GO:0042545: cell wall modification | 9.74E-03 |
| 55 | GO:0006396: RNA processing | 1.02E-02 |
| 56 | GO:0006633: fatty acid biosynthetic process | 1.37E-02 |
| 57 | GO:0040008: regulation of growth | 1.42E-02 |
| 58 | GO:0007623: circadian rhythm | 1.46E-02 |
| 59 | GO:0045490: pectin catabolic process | 1.46E-02 |
| 60 | GO:0009409: response to cold | 1.75E-02 |
| 61 | GO:0009826: unidimensional cell growth | 1.94E-02 |
| 62 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.38E-02 |
| 63 | GO:0045454: cell redox homeostasis | 2.64E-02 |
| 64 | GO:0016042: lipid catabolic process | 3.01E-02 |
| 65 | GO:0006629: lipid metabolic process | 3.07E-02 |
| 66 | GO:0006397: mRNA processing | 3.16E-02 |
| 67 | GO:0006508: proteolysis | 3.97E-02 |
| 68 | GO:0009611: response to wounding | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 2 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 2.53E-05 |
| 3 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.53E-05 |
| 4 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.53E-05 |
| 5 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 6.44E-05 |
| 6 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 6.44E-05 |
| 7 | GO:0005464: UDP-xylose transmembrane transporter activity | 6.44E-05 |
| 8 | GO:0031177: phosphopantetheine binding | 3.65E-04 |
| 9 | GO:0000035: acyl binding | 4.36E-04 |
| 10 | GO:0004602: glutathione peroxidase activity | 4.36E-04 |
| 11 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 5.89E-04 |
| 12 | GO:0008047: enzyme activator activity | 9.24E-04 |
| 13 | GO:0004190: aspartic-type endopeptidase activity | 1.40E-03 |
| 14 | GO:0031409: pigment binding | 1.50E-03 |
| 15 | GO:0003727: single-stranded RNA binding | 2.18E-03 |
| 16 | GO:0047134: protein-disulfide reductase activity | 2.30E-03 |
| 17 | GO:0004791: thioredoxin-disulfide reductase activity | 2.68E-03 |
| 18 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.21E-03 |
| 19 | GO:0005200: structural constituent of cytoskeleton | 3.48E-03 |
| 20 | GO:0016168: chlorophyll binding | 3.91E-03 |
| 21 | GO:0005096: GTPase activator activity | 4.67E-03 |
| 22 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 5.64E-03 |
| 23 | GO:0004185: serine-type carboxypeptidase activity | 6.32E-03 |
| 24 | GO:0043621: protein self-association | 6.67E-03 |
| 25 | GO:0016298: lipase activity | 7.97E-03 |
| 26 | GO:0045330: aspartyl esterase activity | 8.35E-03 |
| 27 | GO:0030599: pectinesterase activity | 9.54E-03 |
| 28 | GO:0015035: protein disulfide oxidoreductase activity | 1.02E-02 |
| 29 | GO:0046910: pectinesterase inhibitor activity | 1.39E-02 |
| 30 | GO:0015297: antiporter activity | 1.42E-02 |
| 31 | GO:0016788: hydrolase activity, acting on ester bonds | 2.02E-02 |
| 32 | GO:0008233: peptidase activity | 2.30E-02 |
| 33 | GO:0052689: carboxylic ester hydrolase activity | 2.50E-02 |
| 34 | GO:0003924: GTPase activity | 3.07E-02 |
| 35 | GO:0008289: lipid binding | 3.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 6.26E-08 |
| 3 | GO:0009507: chloroplast | 9.83E-08 |
| 4 | GO:0009570: chloroplast stroma | 2.91E-07 |
| 5 | GO:0009534: chloroplast thylakoid | 3.57E-07 |
| 6 | GO:0009941: chloroplast envelope | 1.14E-04 |
| 7 | GO:0009531: secondary cell wall | 1.69E-04 |
| 8 | GO:0009517: PSII associated light-harvesting complex II | 2.30E-04 |
| 9 | GO:0030660: Golgi-associated vesicle membrane | 2.30E-04 |
| 10 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 2.30E-04 |
| 11 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 5.89E-04 |
| 12 | GO:0009538: photosystem I reaction center | 5.89E-04 |
| 13 | GO:0045298: tubulin complex | 7.52E-04 |
| 14 | GO:0010287: plastoglobule | 9.13E-04 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 9.61E-04 |
| 16 | GO:0005765: lysosomal membrane | 1.01E-03 |
| 17 | GO:0009579: thylakoid | 1.05E-03 |
| 18 | GO:0030095: chloroplast photosystem II | 1.30E-03 |
| 19 | GO:0030076: light-harvesting complex | 1.40E-03 |
| 20 | GO:0009522: photosystem I | 2.68E-03 |
| 21 | GO:0009523: photosystem II | 2.80E-03 |
| 22 | GO:0071944: cell periphery | 3.21E-03 |
| 23 | GO:0031977: thylakoid lumen | 5.98E-03 |
| 24 | GO:0010008: endosome membrane | 8.93E-03 |
| 25 | GO:0005618: cell wall | 1.15E-02 |
| 26 | GO:0005623: cell | 1.19E-02 |
| 27 | GO:0016021: integral component of membrane | 1.35E-02 |
| 28 | GO:0005874: microtubule | 2.27E-02 |
| 29 | GO:0031969: chloroplast membrane | 2.32E-02 |
| 30 | GO:0016020: membrane | 4.33E-02 |
| 31 | GO:0005774: vacuolar membrane | 4.47E-02 |