Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G37300

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015739: sialic acid transport0.00E+00
2GO:0002184: cytoplasmic translational termination0.00E+00
3GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
4GO:0061635: regulation of protein complex stability0.00E+00
5GO:0042821: pyridoxal biosynthetic process0.00E+00
6GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
7GO:0090042: tubulin deacetylation0.00E+00
8GO:0042820: vitamin B6 catabolic process0.00E+00
9GO:1904966: positive regulation of vitamin E biosynthetic process0.00E+00
10GO:1904964: positive regulation of phytol biosynthetic process0.00E+00
11GO:0009773: photosynthetic electron transport in photosystem I8.85E-11
12GO:0015979: photosynthesis1.05E-10
13GO:0042254: ribosome biogenesis8.74E-08
14GO:0032544: plastid translation1.44E-07
15GO:1902326: positive regulation of chlorophyll biosynthetic process4.15E-06
16GO:0018298: protein-chromophore linkage5.92E-06
17GO:0006412: translation7.48E-05
18GO:0006636: unsaturated fatty acid biosynthetic process9.50E-05
19GO:0010196: nonphotochemical quenching2.42E-04
20GO:0042335: cuticle development2.68E-04
21GO:1902458: positive regulation of stomatal opening3.02E-04
22GO:0034337: RNA folding3.02E-04
23GO:0071588: hydrogen peroxide mediated signaling pathway3.02E-04
24GO:0009443: pyridoxal 5'-phosphate salvage3.02E-04
25GO:0071277: cellular response to calcium ion3.02E-04
26GO:0000481: maturation of 5S rRNA3.02E-04
27GO:0008610: lipid biosynthetic process3.05E-04
28GO:0010205: photoinhibition5.34E-04
29GO:0010027: thylakoid membrane organization6.32E-04
30GO:1903426: regulation of reactive oxygen species biosynthetic process6.60E-04
31GO:0030388: fructose 1,6-bisphosphate metabolic process6.60E-04
32GO:0080005: photosystem stoichiometry adjustment6.60E-04
33GO:0034755: iron ion transmembrane transport6.60E-04
34GO:0071457: cellular response to ozone6.60E-04
35GO:0006094: gluconeogenesis9.29E-04
36GO:0010207: photosystem II assembly1.04E-03
37GO:0006000: fructose metabolic process1.07E-03
38GO:0006954: inflammatory response1.07E-03
39GO:0006518: peptide metabolic process1.07E-03
40GO:0009735: response to cytokinin1.10E-03
41GO:0009853: photorespiration1.18E-03
42GO:0006633: fatty acid biosynthetic process1.28E-03
43GO:0046836: glycolipid transport1.53E-03
44GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.53E-03
45GO:0071484: cellular response to light intensity1.53E-03
46GO:0009152: purine ribonucleotide biosynthetic process1.53E-03
47GO:0046653: tetrahydrofolate metabolic process1.53E-03
48GO:0080170: hydrogen peroxide transmembrane transport1.53E-03
49GO:0006424: glutamyl-tRNA aminoacylation1.53E-03
50GO:1901332: negative regulation of lateral root development1.53E-03
51GO:0009768: photosynthesis, light harvesting in photosystem I1.58E-03
52GO:0010037: response to carbon dioxide2.06E-03
53GO:0015976: carbon utilization2.06E-03
54GO:0071486: cellular response to high light intensity2.06E-03
55GO:0009765: photosynthesis, light harvesting2.06E-03
56GO:0045727: positive regulation of translation2.06E-03
57GO:2000122: negative regulation of stomatal complex development2.06E-03
58GO:0006364: rRNA processing2.38E-03
59GO:0031365: N-terminal protein amino acid modification2.63E-03
60GO:0006461: protein complex assembly2.63E-03
61GO:0071493: cellular response to UV-B2.63E-03
62GO:0016120: carotene biosynthetic process2.63E-03
63GO:0032543: mitochondrial translation2.63E-03
64GO:0006564: L-serine biosynthetic process2.63E-03
65GO:0010236: plastoquinone biosynthetic process2.63E-03
66GO:0045038: protein import into chloroplast thylakoid membrane2.63E-03
67GO:0055114: oxidation-reduction process2.75E-03
68GO:0009658: chloroplast organization2.87E-03
69GO:0009409: response to cold3.16E-03
70GO:0010405: arabinogalactan protein metabolic process3.24E-03
71GO:0042549: photosystem II stabilization3.24E-03
72GO:0009913: epidermal cell differentiation3.24E-03
73GO:0032973: amino acid export3.24E-03
74GO:0010190: cytochrome b6f complex assembly3.24E-03
75GO:0018258: protein O-linked glycosylation via hydroxyproline3.24E-03
76GO:0006086: acetyl-CoA biosynthetic process from pyruvate3.24E-03
77GO:0010189: vitamin E biosynthetic process3.90E-03
78GO:0009854: oxidative photosynthetic carbon pathway3.90E-03
79GO:0010019: chloroplast-nucleus signaling pathway3.90E-03
80GO:0009955: adaxial/abaxial pattern specification3.90E-03
81GO:0042372: phylloquinone biosynthetic process3.90E-03
82GO:1901259: chloroplast rRNA processing3.90E-03
83GO:0030488: tRNA methylation3.90E-03
84GO:0006401: RNA catabolic process4.60E-03
85GO:0009395: phospholipid catabolic process4.60E-03
86GO:0043090: amino acid import4.60E-03
87GO:0009645: response to low light intensity stimulus4.60E-03
88GO:0006400: tRNA modification4.60E-03
89GO:2000070: regulation of response to water deprivation5.35E-03
90GO:0009231: riboflavin biosynthetic process5.35E-03
91GO:0009642: response to light intensity5.35E-03
92GO:0006605: protein targeting5.35E-03
93GO:0009704: de-etiolation5.35E-03
94GO:0032508: DNA duplex unwinding5.35E-03
95GO:0006869: lipid transport6.03E-03
96GO:0017004: cytochrome complex assembly6.13E-03
97GO:0006002: fructose 6-phosphate metabolic process6.13E-03
98GO:0071482: cellular response to light stimulus6.13E-03
99GO:0015996: chlorophyll catabolic process6.13E-03
100GO:0007186: G-protein coupled receptor signaling pathway6.13E-03
101GO:0019430: removal of superoxide radicals6.13E-03
102GO:0009657: plastid organization6.13E-03
103GO:0030244: cellulose biosynthetic process6.61E-03
104GO:0015780: nucleotide-sugar transport6.95E-03
105GO:0009051: pentose-phosphate shunt, oxidative branch6.95E-03
106GO:0006098: pentose-phosphate shunt6.95E-03
107GO:0090305: nucleic acid phosphodiester bond hydrolysis6.95E-03
108GO:0080144: amino acid homeostasis6.95E-03
109GO:0090333: regulation of stomatal closure6.95E-03
110GO:0055085: transmembrane transport7.33E-03
111GO:0009638: phototropism7.80E-03
112GO:0034599: cellular response to oxidative stress8.77E-03
113GO:0000038: very long-chain fatty acid metabolic process9.63E-03
114GO:0019684: photosynthesis, light reaction9.63E-03
115GO:0009089: lysine biosynthetic process via diaminopimelate9.63E-03
116GO:0043085: positive regulation of catalytic activity9.63E-03
117GO:0006879: cellular iron ion homeostasis9.63E-03
118GO:0045037: protein import into chloroplast stroma1.06E-02
119GO:0009767: photosynthetic electron transport chain1.16E-02
120GO:0005986: sucrose biosynthetic process1.16E-02
121GO:0010628: positive regulation of gene expression1.16E-02
122GO:0006006: glucose metabolic process1.16E-02
123GO:0009644: response to high light intensity1.17E-02
124GO:0008643: carbohydrate transport1.17E-02
125GO:0019253: reductive pentose-phosphate cycle1.26E-02
126GO:0090351: seedling development1.37E-02
127GO:0009825: multidimensional cell growth1.37E-02
128GO:0005985: sucrose metabolic process1.37E-02
129GO:0009833: plant-type primary cell wall biogenesis1.48E-02
130GO:0006833: water transport1.48E-02
131GO:0010025: wax biosynthetic process1.48E-02
132GO:0000027: ribosomal large subunit assembly1.59E-02
133GO:0016575: histone deacetylation1.71E-02
134GO:0080167: response to karrikin1.72E-02
135GO:0006096: glycolytic process1.73E-02
136GO:0061077: chaperone-mediated protein folding1.82E-02
137GO:0031408: oxylipin biosynthetic process1.82E-02
138GO:0016226: iron-sulfur cluster assembly1.95E-02
139GO:0006730: one-carbon metabolic process1.95E-02
140GO:0009306: protein secretion2.20E-02
141GO:0034220: ion transmembrane transport2.46E-02
142GO:0010182: sugar mediated signaling pathway2.59E-02
143GO:0071472: cellular response to salt stress2.59E-02
144GO:0006662: glycerol ether metabolic process2.59E-02
145GO:0016132: brassinosteroid biosynthetic process3.01E-02
146GO:0071554: cell wall organization or biogenesis3.01E-02
147GO:0000302: response to reactive oxygen species3.01E-02
148GO:0006810: transport3.15E-02
149GO:0008152: metabolic process3.17E-02
150GO:0016126: sterol biosynthetic process3.92E-02
151GO:0001666: response to hypoxia3.92E-02
152GO:0042128: nitrate assimilation4.24E-02
153GO:0015995: chlorophyll biosynthetic process4.40E-02
154GO:0009817: defense response to fungus, incompatible interaction4.73E-02
155GO:0010311: lateral root formation4.90E-02
156GO:0009832: plant-type cell wall biogenesis4.90E-02
RankGO TermAdjusted P value
1GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity0.00E+00
2GO:0008859: exoribonuclease II activity0.00E+00
3GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
4GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
5GO:0051721: protein phosphatase 2A binding0.00E+00
6GO:0042903: tubulin deacetylase activity0.00E+00
7GO:0008887: glycerate kinase activity0.00E+00
8GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
9GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
10GO:0015136: sialic acid transmembrane transporter activity0.00E+00
11GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
12GO:0043014: alpha-tubulin binding0.00E+00
13GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
14GO:0019843: rRNA binding2.67E-09
15GO:0016168: chlorophyll binding3.41E-06
16GO:0005528: FK506 binding4.04E-06
17GO:0003735: structural constituent of ribosome1.64E-05
18GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.93E-05
19GO:0043495: protein anchor5.93E-05
20GO:0022891: substrate-specific transmembrane transporter activity1.91E-04
21GO:0019899: enzyme binding2.42E-04
22GO:0000248: C-5 sterol desaturase activity3.02E-04
23GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity3.02E-04
24GO:0009496: plastoquinol--plastocyanin reductase activity3.02E-04
25GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity3.02E-04
26GO:0045485: omega-6 fatty acid desaturase activity3.02E-04
27GO:0005080: protein kinase C binding3.02E-04
28GO:0004033: aldo-keto reductase (NADP) activity3.05E-04
29GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.75E-04
30GO:0042389: omega-3 fatty acid desaturase activity6.60E-04
31GO:0004326: tetrahydrofolylpolyglutamate synthase activity6.60E-04
32GO:0004617: phosphoglycerate dehydrogenase activity6.60E-04
33GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity6.60E-04
34GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity6.60E-04
35GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase6.60E-04
36GO:0008967: phosphoglycolate phosphatase activity6.60E-04
37GO:0016491: oxidoreductase activity9.52E-04
38GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.07E-03
39GO:0070402: NADPH binding1.07E-03
40GO:0008864: formyltetrahydrofolate deformylase activity1.07E-03
41GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity1.07E-03
42GO:0003935: GTP cyclohydrolase II activity1.07E-03
43GO:0031409: pigment binding1.30E-03
44GO:0051536: iron-sulfur cluster binding1.44E-03
45GO:0043023: ribosomal large subunit binding1.53E-03
46GO:0001872: (1->3)-beta-D-glucan binding1.53E-03
47GO:0017089: glycolipid transporter activity1.53E-03
48GO:0048487: beta-tubulin binding1.53E-03
49GO:0016851: magnesium chelatase activity1.53E-03
50GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.53E-03
51GO:0004345: glucose-6-phosphate dehydrogenase activity2.06E-03
52GO:0051861: glycolipid binding2.06E-03
53GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.06E-03
54GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity2.06E-03
55GO:0052793: pectin acetylesterase activity2.06E-03
56GO:0004040: amidase activity2.63E-03
57GO:1990714: hydroxyproline O-galactosyltransferase activity3.24E-03
58GO:0004332: fructose-bisphosphate aldolase activity3.24E-03
59GO:0004130: cytochrome-c peroxidase activity3.24E-03
60GO:0004784: superoxide dismutase activity3.24E-03
61GO:0016208: AMP binding3.24E-03
62GO:0016688: L-ascorbate peroxidase activity3.24E-03
63GO:0004620: phospholipase activity4.60E-03
64GO:0005338: nucleotide-sugar transmembrane transporter activity4.60E-03
65GO:0008235: metalloexopeptidase activity4.60E-03
66GO:0043022: ribosome binding5.35E-03
67GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)6.13E-03
68GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors6.95E-03
69GO:0005381: iron ion transmembrane transporter activity7.80E-03
70GO:0016787: hydrolase activity8.52E-03
71GO:0008047: enzyme activator activity8.70E-03
72GO:0004177: aminopeptidase activity9.63E-03
73GO:0015386: potassium:proton antiporter activity9.63E-03
74GO:0004089: carbonate dehydratase activity1.16E-02
75GO:0031072: heat shock protein binding1.16E-02
76GO:0000175: 3'-5'-exoribonuclease activity1.16E-02
77GO:0004565: beta-galactosidase activity1.16E-02
78GO:0004022: alcohol dehydrogenase (NAD) activity1.16E-02
79GO:0008266: poly(U) RNA binding1.26E-02
80GO:0008146: sulfotransferase activity1.37E-02
81GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.48E-02
82GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.48E-02
83GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.48E-02
84GO:0004407: histone deacetylase activity1.59E-02
85GO:0015079: potassium ion transmembrane transporter activity1.71E-02
86GO:0004540: ribonuclease activity1.82E-02
87GO:0004176: ATP-dependent peptidase activity1.82E-02
88GO:0046872: metal ion binding1.93E-02
89GO:0016760: cellulose synthase (UDP-forming) activity2.07E-02
90GO:0008514: organic anion transmembrane transporter activity2.20E-02
91GO:0047134: protein-disulfide reductase activity2.33E-02
92GO:0004791: thioredoxin-disulfide reductase activity2.73E-02
93GO:0050662: coenzyme binding2.73E-02
94GO:0048038: quinone binding3.01E-02
95GO:0004518: nuclease activity3.16E-02
96GO:0003729: mRNA binding3.22E-02
97GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.31E-02
98GO:0016759: cellulose synthase activity3.46E-02
99GO:0016413: O-acetyltransferase activity3.76E-02
100GO:0016597: amino acid binding3.76E-02
101GO:0015250: water channel activity3.92E-02
102GO:0008289: lipid binding4.22E-02
103GO:0004721: phosphoprotein phosphatase activity4.40E-02
104GO:0030247: polysaccharide binding4.40E-02
105GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.56E-02
106GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.57E-02
107GO:0042802: identical protein binding4.57E-02
108GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.73E-02
109GO:0015238: drug transmembrane transporter activity4.90E-02
RankGO TermAdjusted P value
1GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
2GO:0009507: chloroplast1.53E-68
3GO:0009535: chloroplast thylakoid membrane6.58E-32
4GO:0009570: chloroplast stroma4.04E-25
5GO:0009941: chloroplast envelope3.68E-24
6GO:0009579: thylakoid4.25E-20
7GO:0009543: chloroplast thylakoid lumen4.08E-15
8GO:0009534: chloroplast thylakoid9.40E-14
9GO:0031977: thylakoid lumen2.97E-11
10GO:0005840: ribosome8.51E-08
11GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.31E-07
12GO:0016021: integral component of membrane1.52E-06
13GO:0042651: thylakoid membrane5.05E-06
14GO:0009523: photosystem II2.46E-05
15GO:0009654: photosystem II oxygen evolving complex1.29E-04
16GO:0031969: chloroplast membrane1.78E-04
17GO:0009782: photosystem I antenna complex3.02E-04
18GO:0019898: extrinsic component of membrane3.60E-04
19GO:0009706: chloroplast inner membrane6.46E-04
20GO:0042170: plastid membrane6.60E-04
21GO:0010287: plastoglobule8.38E-04
22GO:0015934: large ribosomal subunit1.06E-03
23GO:0009528: plastid inner membrane1.07E-03
24GO:0010007: magnesium chelatase complex1.07E-03
25GO:0030076: light-harvesting complex1.17E-03
26GO:0009527: plastid outer membrane2.06E-03
27GO:0046658: anchored component of plasma membrane2.26E-03
28GO:0009512: cytochrome b6f complex2.63E-03
29GO:0000178: exosome (RNase complex)2.63E-03
30GO:0010319: stromule4.51E-03
31GO:0009533: chloroplast stromal thylakoid4.60E-03
32GO:0005763: mitochondrial small ribosomal subunit6.95E-03
33GO:0032040: small-subunit processome1.06E-02
34GO:0030095: chloroplast photosystem II1.26E-02
35GO:0015935: small ribosomal subunit1.82E-02
36GO:0009532: plastid stroma1.82E-02
37GO:0016020: membrane2.25E-02
38GO:0009522: photosystem I2.73E-02
39GO:0031225: anchored component of membrane3.31E-02
40GO:0005778: peroxisomal membrane3.61E-02
41GO:0009295: nucleoid3.61E-02
42GO:0000932: P-body3.92E-02
43GO:0009707: chloroplast outer membrane4.73E-02
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Gene type



Gene DE type