GO Enrichment Analysis of Co-expressed Genes with
AT4G36530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 7 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 8 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 6.89E-14 |
| 10 | GO:0015979: photosynthesis | 2.70E-08 |
| 11 | GO:0010027: thylakoid membrane organization | 6.14E-07 |
| 12 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.89E-06 |
| 13 | GO:0006000: fructose metabolic process | 6.94E-06 |
| 14 | GO:0019252: starch biosynthetic process | 7.23E-06 |
| 15 | GO:0005983: starch catabolic process | 1.73E-05 |
| 16 | GO:0006094: gluconeogenesis | 2.16E-05 |
| 17 | GO:0010021: amylopectin biosynthetic process | 2.94E-05 |
| 18 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 6.98E-05 |
| 19 | GO:0009704: de-etiolation | 1.64E-04 |
| 20 | GO:0009642: response to light intensity | 1.64E-04 |
| 21 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.00E-04 |
| 22 | GO:1904964: positive regulation of phytol biosynthetic process | 2.00E-04 |
| 23 | GO:0080051: cutin transport | 2.00E-04 |
| 24 | GO:0065002: intracellular protein transmembrane transport | 2.00E-04 |
| 25 | GO:0043953: protein transport by the Tat complex | 2.00E-04 |
| 26 | GO:0051775: response to redox state | 2.00E-04 |
| 27 | GO:0071277: cellular response to calcium ion | 2.00E-04 |
| 28 | GO:0006002: fructose 6-phosphate metabolic process | 2.04E-04 |
| 29 | GO:0010206: photosystem II repair | 2.49E-04 |
| 30 | GO:0010205: photoinhibition | 2.97E-04 |
| 31 | GO:0009735: response to cytokinin | 3.26E-04 |
| 32 | GO:0018298: protein-chromophore linkage | 4.18E-04 |
| 33 | GO:0097054: L-glutamate biosynthetic process | 4.48E-04 |
| 34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.48E-04 |
| 35 | GO:0015908: fatty acid transport | 4.48E-04 |
| 36 | GO:0034755: iron ion transmembrane transport | 4.48E-04 |
| 37 | GO:0080005: photosystem stoichiometry adjustment | 4.48E-04 |
| 38 | GO:0005986: sucrose biosynthetic process | 5.25E-04 |
| 39 | GO:0010207: photosystem II assembly | 5.92E-04 |
| 40 | GO:0051604: protein maturation | 7.29E-04 |
| 41 | GO:0016050: vesicle organization | 7.29E-04 |
| 42 | GO:0031022: nuclear migration along microfilament | 7.29E-04 |
| 43 | GO:1902448: positive regulation of shade avoidance | 7.29E-04 |
| 44 | GO:0006954: inflammatory response | 7.29E-04 |
| 45 | GO:0009644: response to high light intensity | 8.59E-04 |
| 46 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.04E-03 |
| 47 | GO:0006020: inositol metabolic process | 1.04E-03 |
| 48 | GO:0071484: cellular response to light intensity | 1.04E-03 |
| 49 | GO:0009152: purine ribonucleotide biosynthetic process | 1.04E-03 |
| 50 | GO:0046653: tetrahydrofolate metabolic process | 1.04E-03 |
| 51 | GO:0006107: oxaloacetate metabolic process | 1.04E-03 |
| 52 | GO:0006537: glutamate biosynthetic process | 1.04E-03 |
| 53 | GO:0009658: chloroplast organization | 1.16E-03 |
| 54 | GO:0006021: inositol biosynthetic process | 1.38E-03 |
| 55 | GO:0006734: NADH metabolic process | 1.38E-03 |
| 56 | GO:0010222: stem vascular tissue pattern formation | 1.38E-03 |
| 57 | GO:0019676: ammonia assimilation cycle | 1.38E-03 |
| 58 | GO:0009765: photosynthesis, light harvesting | 1.38E-03 |
| 59 | GO:0006109: regulation of carbohydrate metabolic process | 1.38E-03 |
| 60 | GO:0045727: positive regulation of translation | 1.38E-03 |
| 61 | GO:0015994: chlorophyll metabolic process | 1.38E-03 |
| 62 | GO:0006508: proteolysis | 1.69E-03 |
| 63 | GO:0007018: microtubule-based movement | 1.70E-03 |
| 64 | GO:0032543: mitochondrial translation | 1.76E-03 |
| 65 | GO:0010117: photoprotection | 1.76E-03 |
| 66 | GO:0009904: chloroplast accumulation movement | 1.76E-03 |
| 67 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.17E-03 |
| 68 | GO:0016554: cytidine to uridine editing | 2.17E-03 |
| 69 | GO:0009913: epidermal cell differentiation | 2.17E-03 |
| 70 | GO:0046855: inositol phosphate dephosphorylation | 2.17E-03 |
| 71 | GO:0009903: chloroplast avoidance movement | 2.60E-03 |
| 72 | GO:0016126: sterol biosynthetic process | 2.80E-03 |
| 73 | GO:0009645: response to low light intensity stimulus | 3.06E-03 |
| 74 | GO:0048564: photosystem I assembly | 3.55E-03 |
| 75 | GO:0008610: lipid biosynthetic process | 3.55E-03 |
| 76 | GO:0005978: glycogen biosynthetic process | 3.55E-03 |
| 77 | GO:0030091: protein repair | 3.55E-03 |
| 78 | GO:0005975: carbohydrate metabolic process | 3.66E-03 |
| 79 | GO:0032544: plastid translation | 4.06E-03 |
| 80 | GO:0071482: cellular response to light stimulus | 4.06E-03 |
| 81 | GO:0000373: Group II intron splicing | 4.60E-03 |
| 82 | GO:0090333: regulation of stomatal closure | 4.60E-03 |
| 83 | GO:0009853: photorespiration | 4.61E-03 |
| 84 | GO:0005982: starch metabolic process | 5.15E-03 |
| 85 | GO:0009638: phototropism | 5.15E-03 |
| 86 | GO:1900865: chloroplast RNA modification | 5.15E-03 |
| 87 | GO:0006879: cellular iron ion homeostasis | 6.34E-03 |
| 88 | GO:0009750: response to fructose | 6.34E-03 |
| 89 | GO:0016485: protein processing | 6.34E-03 |
| 90 | GO:0000038: very long-chain fatty acid metabolic process | 6.34E-03 |
| 91 | GO:0043085: positive regulation of catalytic activity | 6.34E-03 |
| 92 | GO:0009416: response to light stimulus | 6.92E-03 |
| 93 | GO:0006790: sulfur compound metabolic process | 6.96E-03 |
| 94 | GO:0010628: positive regulation of gene expression | 7.61E-03 |
| 95 | GO:0006108: malate metabolic process | 7.61E-03 |
| 96 | GO:0010588: cotyledon vascular tissue pattern formation | 7.61E-03 |
| 97 | GO:0009785: blue light signaling pathway | 7.61E-03 |
| 98 | GO:0006364: rRNA processing | 8.01E-03 |
| 99 | GO:0019253: reductive pentose-phosphate cycle | 8.28E-03 |
| 100 | GO:0071732: cellular response to nitric oxide | 8.97E-03 |
| 101 | GO:0046854: phosphatidylinositol phosphorylation | 8.97E-03 |
| 102 | GO:0005985: sucrose metabolic process | 8.97E-03 |
| 103 | GO:0010025: wax biosynthetic process | 9.68E-03 |
| 104 | GO:0055085: transmembrane transport | 9.94E-03 |
| 105 | GO:0055114: oxidation-reduction process | 1.07E-02 |
| 106 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.12E-02 |
| 107 | GO:0008299: isoprenoid biosynthetic process | 1.12E-02 |
| 108 | GO:0016575: histone deacetylation | 1.12E-02 |
| 109 | GO:0006418: tRNA aminoacylation for protein translation | 1.12E-02 |
| 110 | GO:0035428: hexose transmembrane transport | 1.27E-02 |
| 111 | GO:0016226: iron-sulfur cluster assembly | 1.27E-02 |
| 112 | GO:0071369: cellular response to ethylene stimulus | 1.35E-02 |
| 113 | GO:0009561: megagametogenesis | 1.43E-02 |
| 114 | GO:0042335: cuticle development | 1.60E-02 |
| 115 | GO:0006662: glycerol ether metabolic process | 1.69E-02 |
| 116 | GO:0046323: glucose import | 1.69E-02 |
| 117 | GO:0048544: recognition of pollen | 1.78E-02 |
| 118 | GO:0007623: circadian rhythm | 1.98E-02 |
| 119 | GO:0016032: viral process | 2.06E-02 |
| 120 | GO:0030163: protein catabolic process | 2.16E-02 |
| 121 | GO:0071281: cellular response to iron ion | 2.16E-02 |
| 122 | GO:0009567: double fertilization forming a zygote and endosperm | 2.25E-02 |
| 123 | GO:0007166: cell surface receptor signaling pathway | 2.27E-02 |
| 124 | GO:0009611: response to wounding | 2.79E-02 |
| 125 | GO:0016311: dephosphorylation | 2.98E-02 |
| 126 | GO:0009409: response to cold | 3.13E-02 |
| 127 | GO:0000160: phosphorelay signal transduction system | 3.20E-02 |
| 128 | GO:0034599: cellular response to oxidative stress | 3.77E-02 |
| 129 | GO:0006099: tricarboxylic acid cycle | 3.77E-02 |
| 130 | GO:0080167: response to karrikin | 3.80E-02 |
| 131 | GO:0009744: response to sucrose | 4.37E-02 |
| 132 | GO:0051707: response to other organism | 4.37E-02 |
| 133 | GO:0045454: cell redox homeostasis | 4.54E-02 |
| 134 | GO:0006855: drug transmembrane transport | 4.88E-02 |
| 135 | GO:0006869: lipid transport | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 2 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 5 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 6 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 7 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 8 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 9 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 10 | GO:0051060: pullulanase activity | 0.00E+00 |
| 11 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 12 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.89E-06 |
| 14 | GO:0004506: squalene monooxygenase activity | 2.94E-05 |
| 15 | GO:0009011: starch synthase activity | 2.94E-05 |
| 16 | GO:0004222: metalloendopeptidase activity | 3.81E-05 |
| 17 | GO:0004176: ATP-dependent peptidase activity | 6.16E-05 |
| 18 | GO:0019203: carbohydrate phosphatase activity | 2.00E-04 |
| 19 | GO:0008746: NAD(P)+ transhydrogenase activity | 2.00E-04 |
| 20 | GO:0015245: fatty acid transporter activity | 2.00E-04 |
| 21 | GO:0016041: glutamate synthase (ferredoxin) activity | 2.00E-04 |
| 22 | GO:0035671: enone reductase activity | 2.00E-04 |
| 23 | GO:0050308: sugar-phosphatase activity | 2.00E-04 |
| 24 | GO:0004856: xylulokinase activity | 2.00E-04 |
| 25 | GO:0070006: metalloaminopeptidase activity | 2.00E-04 |
| 26 | GO:0008237: metallopeptidase activity | 2.51E-04 |
| 27 | GO:0016168: chlorophyll binding | 3.17E-04 |
| 28 | GO:0047746: chlorophyllase activity | 4.48E-04 |
| 29 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 4.48E-04 |
| 30 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.48E-04 |
| 31 | GO:0033201: alpha-1,4-glucan synthase activity | 4.48E-04 |
| 32 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.48E-04 |
| 33 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.48E-04 |
| 34 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.48E-04 |
| 35 | GO:0008967: phosphoglycolate phosphatase activity | 4.48E-04 |
| 36 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 7.29E-04 |
| 37 | GO:0070402: NADPH binding | 7.29E-04 |
| 38 | GO:0008864: formyltetrahydrofolate deformylase activity | 7.29E-04 |
| 39 | GO:0043169: cation binding | 7.29E-04 |
| 40 | GO:0004373: glycogen (starch) synthase activity | 7.29E-04 |
| 41 | GO:0002161: aminoacyl-tRNA editing activity | 7.29E-04 |
| 42 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 8.62E-04 |
| 43 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.04E-03 |
| 44 | GO:0019201: nucleotide kinase activity | 1.04E-03 |
| 45 | GO:0048487: beta-tubulin binding | 1.04E-03 |
| 46 | GO:0022891: substrate-specific transmembrane transporter activity | 1.16E-03 |
| 47 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.38E-03 |
| 48 | GO:0043495: protein anchor | 1.38E-03 |
| 49 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.76E-03 |
| 50 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.76E-03 |
| 51 | GO:0016615: malate dehydrogenase activity | 2.17E-03 |
| 52 | GO:2001070: starch binding | 2.17E-03 |
| 53 | GO:0004332: fructose-bisphosphate aldolase activity | 2.17E-03 |
| 54 | GO:0042578: phosphoric ester hydrolase activity | 2.17E-03 |
| 55 | GO:0004556: alpha-amylase activity | 2.17E-03 |
| 56 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.60E-03 |
| 57 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.60E-03 |
| 58 | GO:0030060: L-malate dehydrogenase activity | 2.60E-03 |
| 59 | GO:0004017: adenylate kinase activity | 2.60E-03 |
| 60 | GO:0019899: enzyme binding | 3.06E-03 |
| 61 | GO:0043022: ribosome binding | 3.55E-03 |
| 62 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.06E-03 |
| 63 | GO:0046872: metal ion binding | 4.45E-03 |
| 64 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 4.60E-03 |
| 65 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 4.60E-03 |
| 66 | GO:0005381: iron ion transmembrane transporter activity | 5.15E-03 |
| 67 | GO:0016887: ATPase activity | 5.63E-03 |
| 68 | GO:0008047: enzyme activator activity | 5.74E-03 |
| 69 | GO:0004177: aminopeptidase activity | 6.34E-03 |
| 70 | GO:0015386: potassium:proton antiporter activity | 6.34E-03 |
| 71 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.61E-03 |
| 72 | GO:0031072: heat shock protein binding | 7.61E-03 |
| 73 | GO:0004565: beta-galactosidase activity | 7.61E-03 |
| 74 | GO:0008233: peptidase activity | 7.85E-03 |
| 75 | GO:0008266: poly(U) RNA binding | 8.28E-03 |
| 76 | GO:0003777: microtubule motor activity | 8.87E-03 |
| 77 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 9.68E-03 |
| 78 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 9.68E-03 |
| 79 | GO:0031409: pigment binding | 9.68E-03 |
| 80 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 9.68E-03 |
| 81 | GO:0051536: iron-sulfur cluster binding | 1.04E-02 |
| 82 | GO:0004857: enzyme inhibitor activity | 1.04E-02 |
| 83 | GO:0004407: histone deacetylase activity | 1.04E-02 |
| 84 | GO:0005528: FK506 binding | 1.04E-02 |
| 85 | GO:0015079: potassium ion transmembrane transporter activity | 1.12E-02 |
| 86 | GO:0009055: electron carrier activity | 1.44E-02 |
| 87 | GO:0047134: protein-disulfide reductase activity | 1.52E-02 |
| 88 | GO:0004812: aminoacyl-tRNA ligase activity | 1.52E-02 |
| 89 | GO:0004791: thioredoxin-disulfide reductase activity | 1.78E-02 |
| 90 | GO:0016853: isomerase activity | 1.78E-02 |
| 91 | GO:0005355: glucose transmembrane transporter activity | 1.78E-02 |
| 92 | GO:0050662: coenzyme binding | 1.78E-02 |
| 93 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.85E-02 |
| 94 | GO:0005515: protein binding | 1.94E-02 |
| 95 | GO:0048038: quinone binding | 1.97E-02 |
| 96 | GO:0008017: microtubule binding | 2.07E-02 |
| 97 | GO:0000156: phosphorelay response regulator activity | 2.16E-02 |
| 98 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.16E-02 |
| 99 | GO:0042802: identical protein binding | 2.52E-02 |
| 100 | GO:0004721: phosphoprotein phosphatase activity | 2.87E-02 |
| 101 | GO:0008168: methyltransferase activity | 2.95E-02 |
| 102 | GO:0008236: serine-type peptidase activity | 2.98E-02 |
| 103 | GO:0015238: drug transmembrane transporter activity | 3.20E-02 |
| 104 | GO:0030145: manganese ion binding | 3.42E-02 |
| 105 | GO:0050660: flavin adenine dinucleotide binding | 3.55E-02 |
| 106 | GO:0005524: ATP binding | 3.79E-02 |
| 107 | GO:0043621: protein self-association | 4.62E-02 |
| 108 | GO:0042803: protein homodimerization activity | 4.75E-02 |
| 109 | GO:0005198: structural molecule activity | 4.75E-02 |
| 110 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0043235: receptor complex | 0.00E+00 |
| 3 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 8.33E-51 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 6.07E-34 |
| 6 | GO:0009534: chloroplast thylakoid | 2.23E-27 |
| 7 | GO:0009941: chloroplast envelope | 1.56E-22 |
| 8 | GO:0009570: chloroplast stroma | 1.39E-20 |
| 9 | GO:0009579: thylakoid | 1.10E-09 |
| 10 | GO:0010287: plastoglobule | 2.26E-06 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.88E-06 |
| 12 | GO:0009501: amyloplast | 1.64E-04 |
| 13 | GO:0031361: integral component of thylakoid membrane | 2.00E-04 |
| 14 | GO:0009782: photosystem I antenna complex | 2.00E-04 |
| 15 | GO:0031969: chloroplast membrane | 3.04E-04 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 3.64E-04 |
| 17 | GO:0031977: thylakoid lumen | 7.03E-04 |
| 18 | GO:0009897: external side of plasma membrane | 7.29E-04 |
| 19 | GO:0033281: TAT protein transport complex | 7.29E-04 |
| 20 | GO:0042651: thylakoid membrane | 8.95E-04 |
| 21 | GO:0016021: integral component of membrane | 9.89E-04 |
| 22 | GO:0005871: kinesin complex | 1.36E-03 |
| 23 | GO:0009526: plastid envelope | 1.38E-03 |
| 24 | GO:0055035: plastid thylakoid membrane | 1.76E-03 |
| 25 | GO:0009523: photosystem II | 1.82E-03 |
| 26 | GO:0010319: stromule | 2.50E-03 |
| 27 | GO:0048046: apoplast | 2.53E-03 |
| 28 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.60E-03 |
| 29 | GO:0009508: plastid chromosome | 7.61E-03 |
| 30 | GO:0016020: membrane | 8.30E-03 |
| 31 | GO:0030076: light-harvesting complex | 8.97E-03 |
| 32 | GO:0009654: photosystem II oxygen evolving complex | 1.12E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 1.14E-02 |
| 34 | GO:0009532: plastid stroma | 1.19E-02 |
| 35 | GO:0005623: cell | 1.47E-02 |
| 36 | GO:0005759: mitochondrial matrix | 1.80E-02 |
| 37 | GO:0019898: extrinsic component of membrane | 1.87E-02 |
| 38 | GO:0009295: nucleoid | 2.35E-02 |
| 39 | GO:0005874: microtubule | 3.67E-02 |