co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0080056: petal vascular tissue pattern formation	0.00E+00
4	GO:0080180: 2-methylguanosine metabolic process	0.00E+00
5	GO:0039694: viral RNA genome replication	0.00E+00
6	GO:0045747: positive regulation of Notch signaling pathway	0.00E+00
7	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
8	GO:0031564: transcription antitermination	0.00E+00
9	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
10	GO:0007141: male meiosis I	0.00E+00
11	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
12	GO:0048227: plasma membrane to endosome transport	0.00E+00
13	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
14	GO:0009612: response to mechanical stimulus	1.88E-04
15	GO:0009968: negative regulation of signal transduction	3.04E-04
16	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	3.04E-04
17	GO:0006177: GMP biosynthetic process	3.04E-04
18	GO:0043547: positive regulation of GTPase activity	3.04E-04
19	GO:0006422: aspartyl-tRNA aminoacylation	3.04E-04
20	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	3.04E-04
21	GO:1990022: RNA polymerase III complex localization to nucleus	3.04E-04
22	GO:0002143: tRNA wobble position uridine thiolation	3.04E-04
23	GO:0044376: RNA polymerase II complex import to nucleus	3.04E-04
24	GO:0010265: SCF complex assembly	3.04E-04
25	GO:0009819: drought recovery	3.09E-04
26	GO:0002221: pattern recognition receptor signaling pathway	6.66E-04
27	GO:0015914: phospholipid transport	6.66E-04
28	GO:2000072: regulation of defense response to fungus, incompatible interaction	6.66E-04
29	GO:0050684: regulation of mRNA processing	6.66E-04
30	GO:0006212: uracil catabolic process	6.66E-04
31	GO:0019483: beta-alanine biosynthetic process	6.66E-04
32	GO:0030010: establishment of cell polarity	6.66E-04
33	GO:0006499: N-terminal protein myristoylation	1.01E-03
34	GO:0042780: tRNA 3'-end processing	1.08E-03
35	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.08E-03
36	GO:0006421: asparaginyl-tRNA aminoacylation	1.08E-03
37	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	1.08E-03
38	GO:0032784: regulation of DNA-templated transcription, elongation	1.08E-03
39	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.08E-03
40	GO:0000027: ribosomal large subunit assembly	1.45E-03
41	GO:0001676: long-chain fatty acid metabolic process	1.55E-03
42	GO:0000187: activation of MAPK activity	1.55E-03
43	GO:0048194: Golgi vesicle budding	1.55E-03
44	GO:0072583: clathrin-dependent endocytosis	1.55E-03
45	GO:0042742: defense response to bacterium	1.67E-03
46	GO:0007131: reciprocal meiotic recombination	1.92E-03
47	GO:0034613: cellular protein localization	2.07E-03
48	GO:0060548: negative regulation of cell death	2.07E-03
49	GO:0033320: UDP-D-xylose biosynthetic process	2.07E-03
50	GO:0000460: maturation of 5.8S rRNA	2.07E-03
51	GO:0006221: pyrimidine nucleotide biosynthetic process	2.07E-03
52	GO:2000038: regulation of stomatal complex development	2.07E-03
53	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	2.07E-03
54	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	2.07E-03
55	GO:0080142: regulation of salicylic acid biosynthetic process	2.07E-03
56	GO:0010227: floral organ abscission	2.10E-03
57	GO:0009229: thiamine diphosphate biosynthetic process	2.65E-03
58	GO:0045116: protein neddylation	2.65E-03
59	GO:0018344: protein geranylgeranylation	2.65E-03
60	GO:0098719: sodium ion import across plasma membrane	2.65E-03
61	GO:0005513: detection of calcium ion	2.65E-03
62	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	3.27E-03
63	GO:0048232: male gamete generation	3.27E-03
64	GO:0000470: maturation of LSU-rRNA	3.27E-03
65	GO:0042732: D-xylose metabolic process	3.27E-03
66	GO:0006970: response to osmotic stress	3.27E-03
67	GO:0009228: thiamine biosynthetic process	3.27E-03
68	GO:0007264: small GTPase mediated signal transduction	3.79E-03
69	GO:2000037: regulation of stomatal complex patterning	3.93E-03
70	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.93E-03
71	GO:0000911: cytokinesis by cell plate formation	3.93E-03
72	GO:0006694: steroid biosynthetic process	3.93E-03
73	GO:0050790: regulation of catalytic activity	4.64E-03
74	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.64E-03
75	GO:0043090: amino acid import	4.64E-03
76	GO:0070370: cellular heat acclimation	4.64E-03
77	GO:0006400: tRNA modification	4.64E-03
78	GO:0045454: cell redox homeostasis	5.34E-03
79	GO:0016559: peroxisome fission	5.39E-03
80	GO:0006875: cellular metal ion homeostasis	5.39E-03
81	GO:0006468: protein phosphorylation	5.44E-03
82	GO:0043562: cellular response to nitrogen levels	6.18E-03
83	GO:0006002: fructose 6-phosphate metabolic process	6.18E-03
84	GO:0009880: embryonic pattern specification	6.18E-03
85	GO:0006367: transcription initiation from RNA polymerase II promoter	6.18E-03
86	GO:0006261: DNA-dependent DNA replication	6.18E-03
87	GO:0008219: cell death	6.69E-03
88	GO:0046685: response to arsenic-containing substance	7.01E-03
89	GO:0009821: alkaloid biosynthetic process	7.01E-03
90	GO:0051453: regulation of intracellular pH	7.87E-03
91	GO:0042761: very long-chain fatty acid biosynthetic process	7.87E-03
92	GO:0009867: jasmonic acid mediated signaling pathway	8.49E-03
93	GO:0010629: negative regulation of gene expression	8.77E-03
94	GO:0006995: cellular response to nitrogen starvation	8.77E-03
95	GO:0051026: chiasma assembly	8.77E-03
96	GO:0000103: sulfate assimilation	8.77E-03
97	GO:0030148: sphingolipid biosynthetic process	9.71E-03
98	GO:0000266: mitochondrial fission	1.07E-02
99	GO:0045037: protein import into chloroplast stroma	1.07E-02
100	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.07E-02
101	GO:0010229: inflorescence development	1.17E-02
102	GO:0010588: cotyledon vascular tissue pattern formation	1.17E-02
103	GO:0010102: lateral root morphogenesis	1.17E-02
104	GO:0009734: auxin-activated signaling pathway	1.23E-02
105	GO:0034605: cellular response to heat	1.27E-02
106	GO:0070588: calcium ion transmembrane transport	1.38E-02
107	GO:0010053: root epidermal cell differentiation	1.38E-02
108	GO:0009225: nucleotide-sugar metabolic process	1.38E-02
109	GO:0042343: indole glucosinolate metabolic process	1.38E-02
110	GO:0006364: rRNA processing	1.48E-02
111	GO:2000377: regulation of reactive oxygen species metabolic process	1.60E-02
112	GO:0010187: negative regulation of seed germination	1.60E-02
113	GO:0016575: histone deacetylation	1.72E-02
114	GO:0006874: cellular calcium ion homeostasis	1.72E-02
115	GO:0098542: defense response to other organism	1.84E-02
116	GO:0061077: chaperone-mediated protein folding	1.84E-02
117	GO:0009626: plant-type hypersensitive response	1.87E-02
118	GO:0046777: protein autophosphorylation	1.90E-02
119	GO:0044550: secondary metabolite biosynthetic process	1.94E-02
120	GO:0031348: negative regulation of defense response	1.96E-02
121	GO:0080092: regulation of pollen tube growth	1.96E-02
122	GO:0009814: defense response, incompatible interaction	1.96E-02
123	GO:0055114: oxidation-reduction process	2.06E-02
124	GO:0001944: vasculature development	2.09E-02
125	GO:0042127: regulation of cell proliferation	2.22E-02
126	GO:0009742: brassinosteroid mediated signaling pathway	2.24E-02
127	GO:0010501: RNA secondary structure unwinding	2.48E-02
128	GO:0000413: protein peptidyl-prolyl isomerization	2.48E-02
129	GO:0010087: phloem or xylem histogenesis	2.48E-02
130	GO:0042391: regulation of membrane potential	2.48E-02
131	GO:0015031: protein transport	2.52E-02
132	GO:0010182: sugar mediated signaling pathway	2.62E-02
133	GO:0045489: pectin biosynthetic process	2.62E-02
134	GO:0010305: leaf vascular tissue pattern formation	2.62E-02
135	GO:0006662: glycerol ether metabolic process	2.62E-02
136	GO:0061025: membrane fusion	2.76E-02
137	GO:0006814: sodium ion transport	2.76E-02
138	GO:0042752: regulation of circadian rhythm	2.76E-02
139	GO:0006623: protein targeting to vacuole	2.90E-02
140	GO:0010183: pollen tube guidance	2.90E-02
141	GO:0009749: response to glucose	2.90E-02
142	GO:0048364: root development	3.00E-02
143	GO:0016310: phosphorylation	3.02E-02
144	GO:0000302: response to reactive oxygen species	3.04E-02
145	GO:0002229: defense response to oomycetes	3.04E-02
146	GO:0010193: response to ozone	3.04E-02
147	GO:0009790: embryo development	3.09E-02
148	GO:0030163: protein catabolic process	3.33E-02
149	GO:0006413: translational initiation	3.40E-02
150	GO:0006310: DNA recombination	3.49E-02
151	GO:0010252: auxin homeostasis	3.49E-02
152	GO:0071805: potassium ion transmembrane transport	3.64E-02
153	GO:0010150: leaf senescence	3.65E-02
154	GO:0051607: defense response to virus	3.79E-02
155	GO:0009873: ethylene-activated signaling pathway	3.90E-02
156	GO:0009615: response to virus	3.95E-02
157	GO:0016126: sterol biosynthetic process	3.95E-02
158	GO:0009607: response to biotic stimulus	4.11E-02
159	GO:0007166: cell surface receptor signaling pathway	4.17E-02
160	GO:0006470: protein dephosphorylation	4.17E-02
161	GO:0008380: RNA splicing	4.35E-02
162	GO:0009617: response to bacterium	4.35E-02
163	GO:0016049: cell growth	4.60E-02
164	GO:0009414: response to water deprivation	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
5	GO:0004164: diphthine synthase activity	0.00E+00
6	GO:0070577: lysine-acetylated histone binding	0.00E+00
7	GO:0004631: phosphomevalonate kinase activity	0.00E+00
8	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
9	GO:0050220: prostaglandin-E synthase activity	0.00E+00
10	GO:0050334: thiaminase activity	0.00E+00
11	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
12	GO:0004157: dihydropyrimidinase activity	0.00E+00
13	GO:0052692: raffinose alpha-galactosidase activity	1.50E-05
14	GO:0004557: alpha-galactosidase activity	1.50E-05
15	GO:0000166: nucleotide binding	7.23E-05
16	GO:0008641: small protein activating enzyme activity	9.49E-05
17	GO:0005524: ATP binding	1.06E-04
18	GO:0042134: rRNA primary transcript binding	3.04E-04
19	GO:0032050: clathrin heavy chain binding	3.04E-04
20	GO:0010013: N-1-naphthylphthalamic acid binding	3.04E-04
21	GO:0015085: calcium ion transmembrane transporter activity	3.04E-04
22	GO:0004815: aspartate-tRNA ligase activity	3.04E-04
23	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.09E-04
24	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	6.66E-04
25	GO:0019781: NEDD8 activating enzyme activity	6.66E-04
26	GO:0003938: IMP dehydrogenase activity	6.66E-04
27	GO:0038199: ethylene receptor activity	6.66E-04
28	GO:0045140: inositol phosphoceramide synthase activity	6.66E-04
29	GO:0004177: aminopeptidase activity	7.28E-04
30	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.40E-04
31	GO:0016805: dipeptidase activity	1.08E-03
32	GO:0005093: Rab GDP-dissociation inhibitor activity	1.08E-03
33	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.08E-03
34	GO:0008430: selenium binding	1.08E-03
35	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	1.08E-03
36	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.08E-03
37	GO:0004816: asparagine-tRNA ligase activity	1.08E-03
38	GO:0004663: Rab geranylgeranyltransferase activity	1.08E-03
39	GO:0051740: ethylene binding	1.55E-03
40	GO:0031176: endo-1,4-beta-xylanase activity	1.55E-03
41	GO:0004792: thiosulfate sulfurtransferase activity	1.55E-03
42	GO:0033612: receptor serine/threonine kinase binding	1.76E-03
43	GO:0015204: urea transmembrane transporter activity	2.07E-03
44	GO:0070628: proteasome binding	2.07E-03
45	GO:0004930: G-protein coupled receptor activity	2.07E-03
46	GO:0047134: protein-disulfide reductase activity	2.47E-03
47	GO:0004040: amidase activity	2.65E-03
48	GO:0016301: kinase activity	2.67E-03
49	GO:0004791: thioredoxin-disulfide reductase activity	3.09E-03
50	GO:0048040: UDP-glucuronate decarboxylase activity	3.27E-03
51	GO:0035252: UDP-xylosyltransferase activity	3.27E-03
52	GO:0004674: protein serine/threonine kinase activity	3.70E-03
53	GO:0070403: NAD+ binding	3.93E-03
54	GO:0015035: protein disulfide oxidoreductase activity	3.93E-03
55	GO:0102391: decanoate--CoA ligase activity	3.93E-03
56	GO:0004012: phospholipid-translocating ATPase activity	3.93E-03
57	GO:0004602: glutathione peroxidase activity	3.93E-03
58	GO:0004467: long-chain fatty acid-CoA ligase activity	4.64E-03
59	GO:0008235: metalloexopeptidase activity	4.64E-03
60	GO:0003872: 6-phosphofructokinase activity	4.64E-03
61	GO:0008320: protein transmembrane transporter activity	4.64E-03
62	GO:0043295: glutathione binding	4.64E-03
63	GO:0004708: MAP kinase kinase activity	5.39E-03
64	GO:0052747: sinapyl alcohol dehydrogenase activity	5.39E-03
65	GO:0004722: protein serine/threonine phosphatase activity	6.14E-03
66	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	6.18E-03
67	GO:0003824: catalytic activity	6.49E-03
68	GO:0005096: GTPase activator activity	7.03E-03
69	GO:0030145: manganese ion binding	7.74E-03
70	GO:0016844: strictosidine synthase activity	7.87E-03
71	GO:0003697: single-stranded DNA binding	8.49E-03
72	GO:0004713: protein tyrosine kinase activity	8.77E-03
73	GO:0004673: protein histidine kinase activity	8.77E-03
74	GO:0001054: RNA polymerase I activity	9.71E-03
75	GO:0015386: potassium:proton antiporter activity	9.71E-03
76	GO:0008794: arsenate reductase (glutaredoxin) activity	9.71E-03
77	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.07E-02
78	GO:0005515: protein binding	1.09E-02
79	GO:0000155: phosphorelay sensor kinase activity	1.17E-02
80	GO:0005388: calcium-transporting ATPase activity	1.17E-02
81	GO:0000175: 3'-5'-exoribonuclease activity	1.17E-02
82	GO:0004022: alcohol dehydrogenase (NAD) activity	1.17E-02
83	GO:0015293: symporter activity	1.23E-02
84	GO:0004535: poly(A)-specific ribonuclease activity	1.27E-02
85	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.28E-02
86	GO:0004190: aspartic-type endopeptidase activity	1.38E-02
87	GO:0030552: cAMP binding	1.38E-02
88	GO:0030553: cGMP binding	1.38E-02
89	GO:0003712: transcription cofactor activity	1.38E-02
90	GO:0004970: ionotropic glutamate receptor activity	1.38E-02
91	GO:0005217: intracellular ligand-gated ion channel activity	1.38E-02
92	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.48E-02
93	GO:0003954: NADH dehydrogenase activity	1.60E-02
94	GO:0004407: histone deacetylase activity	1.60E-02
95	GO:0005528: FK506 binding	1.60E-02
96	GO:0005216: ion channel activity	1.72E-02
97	GO:0008408: 3'-5' exonuclease activity	1.84E-02
98	GO:0004540: ribonuclease activity	1.84E-02
99	GO:0046872: metal ion binding	2.02E-02
100	GO:0016746: transferase activity, transferring acyl groups	2.18E-02
101	GO:0003727: single-stranded RNA binding	2.22E-02
102	GO:0008026: ATP-dependent helicase activity	2.24E-02
103	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.41E-02
104	GO:0005249: voltage-gated potassium channel activity	2.48E-02
105	GO:0030551: cyclic nucleotide binding	2.48E-02
106	GO:0004527: exonuclease activity	2.62E-02
107	GO:0001085: RNA polymerase II transcription factor binding	2.62E-02
108	GO:0016491: oxidoreductase activity	2.68E-02
109	GO:0004872: receptor activity	2.90E-02
110	GO:0019825: oxygen binding	2.95E-02
111	GO:0004197: cysteine-type endopeptidase activity	3.19E-02
112	GO:0005516: calmodulin binding	3.20E-02
113	GO:0015385: sodium:proton antiporter activity	3.33E-02
114	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.33E-02
115	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.40E-02
116	GO:0016791: phosphatase activity	3.49E-02
117	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.64E-02
118	GO:0003743: translation initiation factor activity	4.26E-02
119	GO:0008375: acetylglucosaminyltransferase activity	4.27E-02
120	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.27E-02
121	GO:0005509: calcium ion binding	4.37E-02
122	GO:0004683: calmodulin-dependent protein kinase activity	4.44E-02
123	GO:0004721: phosphoprotein phosphatase activity	4.44E-02
124	GO:0004004: ATP-dependent RNA helicase activity	4.44E-02
125	GO:0008236: serine-type peptidase activity	4.60E-02
126	GO:0005506: iron ion binding	4.79E-02
127	GO:0016887: ATPase activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005674: transcription factor TFIIF complex	0.00E+00
3	GO:0005829: cytosol	6.40E-07
4	GO:0005886: plasma membrane	3.50E-05
5	GO:0030014: CCR4-NOT complex	3.04E-04
6	GO:0031304: intrinsic component of mitochondrial inner membrane	6.66E-04
7	GO:0005802: trans-Golgi network	1.00E-03
8	GO:0043234: protein complex	1.31E-03
9	GO:0005768: endosome	1.32E-03
10	GO:0031461: cullin-RING ubiquitin ligase complex	1.55E-03
11	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.55E-03
12	GO:0030658: transport vesicle membrane	1.55E-03
13	GO:0005945: 6-phosphofructokinase complex	2.65E-03
14	GO:0010008: endosome membrane	3.12E-03
15	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.36E-03
16	GO:0005794: Golgi apparatus	3.36E-03
17	GO:0005783: endoplasmic reticulum	4.06E-03
18	GO:0005789: endoplasmic reticulum membrane	4.23E-03
19	GO:0032580: Golgi cisterna membrane	4.30E-03
20	GO:0005778: peroxisomal membrane	4.56E-03
21	GO:0000794: condensed nuclear chromosome	4.64E-03
22	GO:0030687: preribosome, large subunit precursor	4.64E-03
23	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	4.64E-03
24	GO:0016021: integral component of membrane	4.86E-03
25	GO:0005737: cytoplasm	6.75E-03
26	GO:0005736: DNA-directed RNA polymerase I complex	7.01E-03
27	GO:0030125: clathrin vesicle coat	8.77E-03
28	GO:0017119: Golgi transport complex	8.77E-03
29	GO:0031902: late endosome membrane	1.01E-02
30	GO:0005773: vacuole	1.09E-02
31	GO:0005887: integral component of plasma membrane	1.17E-02
32	GO:0005764: lysosome	1.27E-02
33	GO:0005839: proteasome core complex	1.84E-02
34	GO:0005741: mitochondrial outer membrane	1.84E-02
35	GO:0005834: heterotrimeric G-protein complex	1.87E-02
36	GO:0005777: peroxisome	2.15E-02
37	GO:0000790: nuclear chromatin	2.35E-02
38	GO:0009504: cell plate	2.90E-02
39	GO:0000932: P-body	3.95E-02
40	GO:0016020: membrane	4.03E-02
41	GO:0005730: nucleolus	4.05E-02
42	GO:0005667: transcription factor complex	4.27E-02
43	GO:0019005: SCF ubiquitin ligase complex	4.77E-02
44	GO:0000151: ubiquitin ligase complex	4.77E-02