co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
2	GO:0010378: temperature compensation of the circadian clock	0.00E+00
3	GO:0009768: photosynthesis, light harvesting in photosystem I	1.29E-07
4	GO:0007623: circadian rhythm	6.72E-07
5	GO:0009769: photosynthesis, light harvesting in photosystem II	1.81E-06
6	GO:0009645: response to low light intensity stimulus	1.81E-06
7	GO:0018298: protein-chromophore linkage	1.81E-06
8	GO:0010218: response to far red light	2.15E-06
9	GO:0009644: response to high light intensity	4.92E-06
10	GO:0015812: gamma-aminobutyric acid transport	1.39E-05
11	GO:0032958: inositol phosphate biosynthetic process	1.39E-05
12	GO:0051170: nuclear import	3.65E-05
13	GO:0006598: polyamine catabolic process	6.55E-05
14	GO:0006020: inositol metabolic process	9.94E-05
15	GO:0015979: photosynthesis	1.04E-04
16	GO:0000160: phosphorelay signal transduction system	1.23E-04
17	GO:0030104: water homeostasis	1.37E-04
18	GO:0000003: reproduction	1.37E-04
19	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.78E-04
20	GO:0042542: response to hydrogen peroxide	1.88E-04
21	GO:0010114: response to red light	1.97E-04
22	GO:0009635: response to herbicide	2.22E-04
23	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.68E-04
24	GO:1900056: negative regulation of leaf senescence	3.15E-04
25	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.16E-04
26	GO:0009827: plant-type cell wall modification	4.16E-04
27	GO:0090333: regulation of stomatal closure	4.68E-04
28	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.23E-04
29	GO:0010380: regulation of chlorophyll biosynthetic process	5.23E-04
30	GO:0009266: response to temperature stimulus	8.13E-04
31	GO:0003333: amino acid transmembrane transport	1.13E-03
32	GO:0048511: rhythmic process	1.13E-03
33	GO:0009269: response to desiccation	1.13E-03
34	GO:0009409: response to cold	1.15E-03
35	GO:0080167: response to karrikin	1.20E-03
36	GO:0010017: red or far-red light signaling pathway	1.20E-03
37	GO:0071215: cellular response to abscisic acid stimulus	1.27E-03
38	GO:0045892: negative regulation of transcription, DNA-templated	1.45E-03
39	GO:0008360: regulation of cell shape	1.56E-03
40	GO:0042752: regulation of circadian rhythm	1.64E-03
41	GO:0000302: response to reactive oxygen species	1.80E-03
42	GO:1901657: glycosyl compound metabolic process	1.96E-03
43	GO:0009817: defense response to fungus, incompatible interaction	2.75E-03
44	GO:0010119: regulation of stomatal movement	3.03E-03
45	GO:0009910: negative regulation of flower development	3.03E-03
46	GO:0009637: response to blue light	3.22E-03
47	GO:0009640: photomorphogenesis	3.83E-03
48	GO:0008643: carbohydrate transport	4.04E-03
49	GO:0006812: cation transport	4.47E-03
50	GO:0009585: red, far-red light phototransduction	4.69E-03
51	GO:0005975: carbohydrate metabolic process	9.35E-03
52	GO:0010468: regulation of gene expression	9.90E-03
53	GO:0009658: chloroplast organization	1.19E-02
54	GO:0007165: signal transduction	1.28E-02
55	GO:0032259: methylation	1.77E-02
56	GO:0006629: lipid metabolic process	1.82E-02
57	GO:0009408: response to heat	1.82E-02
58	GO:0009753: response to jasmonic acid	1.92E-02
59	GO:0009908: flower development	2.55E-02
60	GO:0006355: regulation of transcription, DNA-templated	2.58E-02
61	GO:0009555: pollen development	2.74E-02
62	GO:0009416: response to light stimulus	2.74E-02
63	GO:0009611: response to wounding	2.79E-02
64	GO:0035556: intracellular signal transduction	2.85E-02
65	GO:0045893: positive regulation of transcription, DNA-templated	3.03E-02
66	GO:0055085: transmembrane transport	3.25E-02
67	GO:0006457: protein folding	3.30E-02
68	GO:0006351: transcription, DNA-templated	4.10E-02
69	GO:0071555: cell wall organization	4.54E-02
70	GO:0030154: cell differentiation	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0080082: esculin beta-glucosidase activity	0.00E+00
2	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
3	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
4	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
5	GO:0004567: beta-mannosidase activity	0.00E+00
6	GO:0031409: pigment binding	8.83E-08
7	GO:0016168: chlorophyll binding	1.24E-06
8	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.39E-05
9	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.39E-05
10	GO:0000829: inositol heptakisphosphate kinase activity	1.39E-05
11	GO:0080079: cellobiose glucosidase activity	1.39E-05
12	GO:0000828: inositol hexakisphosphate kinase activity	1.39E-05
13	GO:0015180: L-alanine transmembrane transporter activity	3.65E-05
14	GO:0046592: polyamine oxidase activity	6.55E-05
15	GO:0000156: phosphorelay response regulator activity	6.58E-05
16	GO:0015189: L-lysine transmembrane transporter activity	9.94E-05
17	GO:0015181: arginine transmembrane transporter activity	9.94E-05
18	GO:0005313: L-glutamate transmembrane transporter activity	1.37E-04
19	GO:0015562: efflux transmembrane transporter activity	2.22E-04
20	GO:0003843: 1,3-beta-D-glucan synthase activity	4.16E-04
21	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.68E-04
22	GO:0015297: antiporter activity	6.19E-04
23	GO:0047372: acylglycerol lipase activity	6.34E-04
24	GO:0004565: beta-galactosidase activity	7.52E-04
25	GO:0008131: primary amine oxidase activity	8.13E-04
26	GO:0008324: cation transmembrane transporter activity	1.07E-03
27	GO:0004707: MAP kinase activity	1.13E-03
28	GO:0046872: metal ion binding	1.59E-03
29	GO:0102483: scopolin beta-glucosidase activity	2.57E-03
30	GO:0003993: acid phosphatase activity	3.32E-03
31	GO:0008422: beta-glucosidase activity	3.42E-03
32	GO:0005198: structural molecule activity	4.15E-03
33	GO:0015171: amino acid transmembrane transporter activity	5.03E-03
34	GO:0022857: transmembrane transporter activity	5.74E-03
35	GO:0008168: methyltransferase activity	1.16E-02
36	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.34E-02
37	GO:0005516: calmodulin binding	3.67E-02
38	GO:0044212: transcription regulatory region DNA binding	4.54E-02
39	GO:0003677: DNA binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0030076: light-harvesting complex	7.18E-08
2	GO:0009522: photosystem I	4.45E-07
3	GO:0010287: plastoglobule	1.73E-05
4	GO:0009523: photosystem II	5.23E-05
5	GO:0009517: PSII associated light-harvesting complex II	1.37E-04
6	GO:0009579: thylakoid	4.12E-04
7	GO:0000148: 1,3-beta-D-glucan synthase complex	4.16E-04
8	GO:0009534: chloroplast thylakoid	4.18E-04
9	GO:0042651: thylakoid membrane	1.07E-03
10	GO:0009535: chloroplast thylakoid membrane	2.16E-03
11	GO:0016021: integral component of membrane	2.58E-03
12	GO:0005777: peroxisome	3.51E-03
13	GO:0031966: mitochondrial membrane	4.47E-03
14	GO:0009941: chloroplast envelope	5.52E-03
15	GO:0005654: nucleoplasm	6.86E-03
16	GO:0005623: cell	7.11E-03
17	GO:0005774: vacuolar membrane	2.14E-02
18	GO:0005887: integral component of plasma membrane	2.27E-02
19	GO:0005618: cell wall	2.45E-02
20	GO:0022626: cytosolic ribosome	2.66E-02
21	GO:0016020: membrane	3.82E-02
22	GO:0005622: intracellular	4.13E-02
23	GO:0009507: chloroplast	4.87E-02