Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G35310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010401: pectic galactan metabolic process0.00E+00
2GO:0019481: L-alanine catabolic process, by transamination0.00E+00
3GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
4GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
5GO:0051553: flavone biosynthetic process0.00E+00
6GO:0000188: inactivation of MAPK activity0.00E+00
7GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
8GO:0008219: cell death8.68E-08
9GO:0009627: systemic acquired resistance1.76E-06
10GO:0048194: Golgi vesicle budding2.27E-05
11GO:0006468: protein phosphorylation2.90E-05
12GO:0042742: defense response to bacterium4.43E-05
13GO:0031348: negative regulation of defense response1.08E-04
14GO:0006470: protein dephosphorylation1.93E-04
15GO:0009617: response to bacterium2.11E-04
16GO:0035344: hypoxanthine transport2.43E-04
17GO:0071366: cellular response to indolebutyric acid stimulus2.43E-04
18GO:0002143: tRNA wobble position uridine thiolation2.43E-04
19GO:0043985: histone H4-R3 methylation2.43E-04
20GO:0006643: membrane lipid metabolic process2.43E-04
21GO:0098721: uracil import across plasma membrane2.43E-04
22GO:0042759: long-chain fatty acid biosynthetic process2.43E-04
23GO:0009968: negative regulation of signal transduction2.43E-04
24GO:0010266: response to vitamin B12.43E-04
25GO:0098702: adenine import across plasma membrane2.43E-04
26GO:0098710: guanine import across plasma membrane2.43E-04
27GO:0016337: single organismal cell-cell adhesion2.43E-04
28GO:0048482: plant ovule morphogenesis2.43E-04
29GO:0043547: positive regulation of GTPase activity2.43E-04
30GO:0010941: regulation of cell death2.43E-04
31GO:2000031: regulation of salicylic acid mediated signaling pathway2.74E-04
32GO:0043066: negative regulation of apoptotic process5.39E-04
33GO:0019483: beta-alanine biosynthetic process5.39E-04
34GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine5.39E-04
35GO:0052542: defense response by callose deposition5.39E-04
36GO:0015012: heparan sulfate proteoglycan biosynthetic process5.39E-04
37GO:0080185: effector dependent induction by symbiont of host immune response5.39E-04
38GO:0006024: glycosaminoglycan biosynthetic process5.39E-04
39GO:0052541: plant-type cell wall cellulose metabolic process5.39E-04
40GO:0006212: uracil catabolic process5.39E-04
41GO:0006952: defense response7.85E-04
42GO:0042344: indole glucosinolate catabolic process8.75E-04
43GO:0010498: proteasomal protein catabolic process8.75E-04
44GO:0046621: negative regulation of organ growth8.75E-04
45GO:0009399: nitrogen fixation1.25E-03
46GO:0002679: respiratory burst involved in defense response1.25E-03
47GO:0046513: ceramide biosynthetic process1.25E-03
48GO:0002239: response to oomycetes1.25E-03
49GO:0072334: UDP-galactose transmembrane transport1.25E-03
50GO:2000022: regulation of jasmonic acid mediated signaling pathway1.40E-03
51GO:0071215: cellular response to abscisic acid stimulus1.53E-03
52GO:0006542: glutamine biosynthetic process1.67E-03
53GO:0060548: negative regulation of cell death1.67E-03
54GO:0033320: UDP-D-xylose biosynthetic process1.67E-03
55GO:1902584: positive regulation of response to water deprivation1.67E-03
56GO:0046323: glucose import2.09E-03
57GO:0006090: pyruvate metabolic process2.13E-03
58GO:0006665: sphingolipid metabolic process2.13E-03
59GO:0018344: protein geranylgeranylation2.13E-03
60GO:0010225: response to UV-C2.13E-03
61GO:0009626: plant-type hypersensitive response2.15E-03
62GO:0048544: recognition of pollen2.24E-03
63GO:0002229: defense response to oomycetes2.57E-03
64GO:0010200: response to chitin2.60E-03
65GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.60E-03
66GO:1900425: negative regulation of defense response to bacterium2.62E-03
67GO:0010337: regulation of salicylic acid metabolic process2.62E-03
68GO:0002238: response to molecule of fungal origin2.62E-03
69GO:0015691: cadmium ion transport2.62E-03
70GO:0006777: Mo-molybdopterin cofactor biosynthetic process2.62E-03
71GO:0042732: D-xylose metabolic process2.62E-03
72GO:0048317: seed morphogenesis2.62E-03
73GO:0007264: small GTPase mediated signal transduction2.75E-03
74GO:0030163: protein catabolic process2.93E-03
75GO:0009612: response to mechanical stimulus3.15E-03
76GO:0000911: cytokinesis by cell plate formation3.15E-03
77GO:0006904: vesicle docking involved in exocytosis3.31E-03
78GO:0001666: response to hypoxia3.71E-03
79GO:0070370: cellular heat acclimation3.72E-03
80GO:0010044: response to aluminum ion3.72E-03
81GO:0010161: red light signaling pathway3.72E-03
82GO:0006955: immune response3.72E-03
83GO:0046470: phosphatidylcholine metabolic process3.72E-03
84GO:0043090: amino acid import3.72E-03
85GO:0009816: defense response to bacterium, incompatible interaction3.92E-03
86GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.31E-03
87GO:0030162: regulation of proteolysis4.31E-03
88GO:1900150: regulation of defense response to fungus4.31E-03
89GO:0032875: regulation of DNA endoreduplication4.31E-03
90GO:0006875: cellular metal ion homeostasis4.31E-03
91GO:0009817: defense response to fungus, incompatible interaction4.83E-03
92GO:0006367: transcription initiation from RNA polymerase II promoter4.93E-03
93GO:0043562: cellular response to nitrogen levels4.93E-03
94GO:0006303: double-strand break repair via nonhomologous end joining4.93E-03
95GO:0010093: specification of floral organ identity4.93E-03
96GO:0006075: (1->3)-beta-D-glucan biosynthetic process4.93E-03
97GO:0009813: flavonoid biosynthetic process5.08E-03
98GO:0006499: N-terminal protein myristoylation5.33E-03
99GO:0010112: regulation of systemic acquired resistance5.59E-03
100GO:0009051: pentose-phosphate shunt, oxidative branch5.59E-03
101GO:0051865: protein autoubiquitination5.59E-03
102GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process5.80E-03
103GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.27E-03
104GO:0000723: telomere maintenance6.27E-03
105GO:0009086: methionine biosynthetic process6.27E-03
106GO:0007064: mitotic sister chromatid cohesion6.99E-03
107GO:0006995: cellular response to nitrogen starvation6.99E-03
108GO:0009870: defense response signaling pathway, resistance gene-dependent6.99E-03
109GO:0043069: negative regulation of programmed cell death6.99E-03
110GO:0006887: exocytosis7.28E-03
111GO:0009682: induced systemic resistance7.73E-03
112GO:0052544: defense response by callose deposition in cell wall7.73E-03
113GO:0030148: sphingolipid biosynthetic process7.73E-03
114GO:0010105: negative regulation of ethylene-activated signaling pathway8.49E-03
115GO:0006890: retrograde vesicle-mediated transport, Golgi to ER8.49E-03
116GO:0071365: cellular response to auxin stimulus8.49E-03
117GO:0000266: mitochondrial fission8.49E-03
118GO:0006807: nitrogen compound metabolic process9.29E-03
119GO:0006108: malate metabolic process9.29E-03
120GO:2000028: regulation of photoperiodism, flowering9.29E-03
121GO:0055046: microgametogenesis9.29E-03
122GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.58E-03
123GO:0031347: regulation of defense response9.58E-03
124GO:0034605: cellular response to heat1.01E-02
125GO:0080188: RNA-directed DNA methylation1.10E-02
126GO:0010030: positive regulation of seed germination1.10E-02
127GO:0009969: xyloglucan biosynthetic process1.10E-02
128GO:0009225: nucleotide-sugar metabolic process1.10E-02
129GO:0009620: response to fungus1.39E-02
130GO:0031408: oxylipin biosynthetic process1.46E-02
131GO:0051260: protein homooligomerization1.46E-02
132GO:0006886: intracellular protein transport1.51E-02
133GO:0035428: hexose transmembrane transport1.56E-02
134GO:0071456: cellular response to hypoxia1.56E-02
135GO:0009625: response to insect1.66E-02
136GO:0006012: galactose metabolic process1.66E-02
137GO:0009561: megagametogenesis1.76E-02
138GO:0042127: regulation of cell proliferation1.76E-02
139GO:0010584: pollen exine formation1.76E-02
140GO:0042147: retrograde transport, endosome to Golgi1.86E-02
141GO:0010087: phloem or xylem histogenesis1.97E-02
142GO:0042631: cellular response to water deprivation1.97E-02
143GO:0006885: regulation of pH2.07E-02
144GO:0010197: polar nucleus fusion2.07E-02
145GO:0010182: sugar mediated signaling pathway2.07E-02
146GO:0008360: regulation of cell shape2.07E-02
147GO:0061025: membrane fusion2.18E-02
148GO:0009749: response to glucose2.29E-02
149GO:0050832: defense response to fungus2.34E-02
150GO:0000302: response to reactive oxygen species2.41E-02
151GO:0006891: intra-Golgi vesicle-mediated transport2.41E-02
152GO:0009873: ethylene-activated signaling pathway2.61E-02
153GO:0010150: leaf senescence2.64E-02
154GO:0006310: DNA recombination2.76E-02
155GO:0007166: cell surface receptor signaling pathway3.01E-02
156GO:0051607: defense response to virus3.01E-02
157GO:0009607: response to biotic stimulus3.26E-02
158GO:0042128: nitrate assimilation3.39E-02
159GO:0048573: photoperiodism, flowering3.52E-02
160GO:0006950: response to stress3.52E-02
161GO:0016049: cell growth3.65E-02
162GO:0010311: lateral root formation3.92E-02
163GO:0009611: response to wounding3.97E-02
164GO:0010119: regulation of stomatal movement4.19E-02
165GO:0006865: amino acid transport4.33E-02
166GO:0045087: innate immune response4.48E-02
167GO:0009867: jasmonic acid mediated signaling pathway4.48E-02
168GO:0006099: tricarboxylic acid cycle4.62E-02
RankGO TermAdjusted P value
1GO:0033746: histone demethylase activity (H3-R2 specific)0.00E+00
2GO:0015591: D-ribose transmembrane transporter activity0.00E+00
3GO:0015575: mannitol transmembrane transporter activity0.00E+00
4GO:0005092: GDP-dissociation inhibitor activity0.00E+00
5GO:0015148: D-xylose transmembrane transporter activity0.00E+00
6GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
7GO:0033749: histone demethylase activity (H4-R3 specific)0.00E+00
8GO:0016504: peptidase activator activity0.00E+00
9GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
10GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
11GO:0015576: sorbitol transmembrane transporter activity0.00E+00
12GO:0033759: flavone synthase activity0.00E+00
13GO:0015370: solute:sodium symporter activity0.00E+00
14GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
15GO:0005548: phospholipid transporter activity0.00E+00
16GO:0003837: beta-ureidopropionase activity0.00E+00
17GO:0070577: lysine-acetylated histone binding0.00E+00
18GO:0005524: ATP binding6.16E-07
19GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism7.08E-07
20GO:0004012: phospholipid-translocating ATPase activity1.91E-06
21GO:0004674: protein serine/threonine kinase activity5.11E-05
22GO:0015294: solute:cation symporter activity2.43E-04
23GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.43E-04
24GO:0047150: betaine-homocysteine S-methyltransferase activity2.43E-04
25GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.43E-04
26GO:0015207: adenine transmembrane transporter activity2.43E-04
27GO:0015168: glycerol transmembrane transporter activity2.43E-04
28GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.43E-04
29GO:1901149: salicylic acid binding2.43E-04
30GO:0015208: guanine transmembrane transporter activity2.43E-04
31GO:0045140: inositol phosphoceramide synthase activity5.39E-04
32GO:0050291: sphingosine N-acyltransferase activity5.39E-04
33GO:0038199: ethylene receptor activity5.39E-04
34GO:0005096: GTPase activator activity6.38E-04
35GO:0004190: aspartic-type endopeptidase activity8.68E-04
36GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.75E-04
37GO:0004383: guanylate cyclase activity8.75E-04
38GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity8.75E-04
39GO:0005093: Rab GDP-dissociation inhibitor activity8.75E-04
40GO:0008265: Mo-molybdopterin cofactor sulfurase activity8.75E-04
41GO:0004725: protein tyrosine phosphatase activity9.63E-04
42GO:0015086: cadmium ion transmembrane transporter activity1.25E-03
43GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.25E-03
44GO:0004792: thiosulfate sulfurtransferase activity1.25E-03
45GO:0051740: ethylene binding1.25E-03
46GO:0005354: galactose transmembrane transporter activity1.25E-03
47GO:0001653: peptide receptor activity1.25E-03
48GO:0033612: receptor serine/threonine kinase binding1.28E-03
49GO:0070628: proteasome binding1.67E-03
50GO:0004470: malic enzyme activity1.67E-03
51GO:0004930: G-protein coupled receptor activity1.67E-03
52GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.67E-03
53GO:0015204: urea transmembrane transporter activity1.67E-03
54GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.67E-03
55GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.67E-03
56GO:0015210: uracil transmembrane transporter activity1.67E-03
57GO:0000287: magnesium ion binding1.73E-03
58GO:0016301: kinase activity1.82E-03
59GO:0004672: protein kinase activity1.89E-03
60GO:0008948: oxaloacetate decarboxylase activity2.13E-03
61GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.13E-03
62GO:0017137: Rab GTPase binding2.13E-03
63GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.13E-03
64GO:0004356: glutamate-ammonia ligase activity2.13E-03
65GO:0045431: flavonol synthase activity2.13E-03
66GO:0005459: UDP-galactose transmembrane transporter activity2.13E-03
67GO:0015145: monosaccharide transmembrane transporter activity2.13E-03
68GO:0008641: small protein activating enzyme activity2.13E-03
69GO:0005355: glucose transmembrane transporter activity2.24E-03
70GO:0048040: UDP-glucuronate decarboxylase activity2.62E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity3.15E-03
72GO:0070403: NAD+ binding3.15E-03
73GO:0004620: phospholipase activity3.72E-03
74GO:0042162: telomeric DNA binding3.72E-03
75GO:0004722: protein serine/threonine phosphatase activity3.74E-03
76GO:0005515: protein binding3.85E-03
77GO:0015144: carbohydrate transmembrane transporter activity4.20E-03
78GO:0004714: transmembrane receptor protein tyrosine kinase activity4.31E-03
79GO:0004034: aldose 1-epimerase activity4.31E-03
80GO:0004721: phosphoprotein phosphatase activity4.37E-03
81GO:0005351: sugar:proton symporter activity4.88E-03
82GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.93E-03
83GO:0003843: 1,3-beta-D-glucan synthase activity4.93E-03
84GO:0004630: phospholipase D activity4.93E-03
85GO:0008138: protein tyrosine/serine/threonine phosphatase activity5.59E-03
86GO:0004003: ATP-dependent DNA helicase activity5.59E-03
87GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6.13E-03
88GO:0004713: protein tyrosine kinase activity6.99E-03
89GO:0004673: protein histidine kinase activity6.99E-03
90GO:0047372: acylglycerol lipase activity7.73E-03
91GO:0015293: symporter activity8.88E-03
92GO:0004022: alcohol dehydrogenase (NAD) activity9.29E-03
93GO:0000155: phosphorelay sensor kinase activity9.29E-03
94GO:0015171: amino acid transmembrane transporter activity1.18E-02
95GO:0061630: ubiquitin protein ligase activity1.23E-02
96GO:0031418: L-ascorbic acid binding1.27E-02
97GO:0003954: NADH dehydrogenase activity1.27E-02
98GO:0043130: ubiquitin binding1.27E-02
99GO:0035251: UDP-glucosyltransferase activity1.46E-02
100GO:0016491: oxidoreductase activity1.54E-02
101GO:0030246: carbohydrate binding1.67E-02
102GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.96E-02
103GO:0005451: monovalent cation:proton antiporter activity1.97E-02
104GO:0005516: calmodulin binding1.97E-02
105GO:0030276: clathrin binding2.07E-02
106GO:0008080: N-acetyltransferase activity2.07E-02
107GO:0010181: FMN binding2.18E-02
108GO:0016853: isomerase activity2.18E-02
109GO:0015299: solute:proton antiporter activity2.18E-02
110GO:0004872: receptor activity2.29E-02
111GO:0015385: sodium:proton antiporter activity2.64E-02
112GO:0016791: phosphatase activity2.76E-02
113GO:0003684: damaged DNA binding2.76E-02
114GO:0016887: ATPase activity3.27E-02
115GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.35E-02
116GO:0030247: polysaccharide binding3.52E-02
117GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.65E-02
118GO:0008168: methyltransferase activity3.92E-02
119GO:0046982: protein heterodimerization activity4.00E-02
120GO:0030145: manganese ion binding4.19E-02
121GO:0046872: metal ion binding4.30E-02
122GO:0043531: ADP binding4.46E-02
123GO:0000987: core promoter proximal region sequence-specific DNA binding4.62E-02
124GO:0008422: beta-glucosidase activity4.76E-02
125GO:0004842: ubiquitin-protein transferase activity4.87E-02
126GO:0016740: transferase activity4.93E-02
RankGO TermAdjusted P value
1GO:0005674: transcription factor TFIIF complex0.00E+00
2GO:0005886: plasma membrane1.19E-10
3GO:0016021: integral component of membrane1.15E-05
4GO:0043564: Ku70:Ku80 complex2.43E-04
5GO:0045252: oxoglutarate dehydrogenase complex2.43E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane5.39E-04
7GO:0070062: extracellular exosome1.25E-03
8GO:0005968: Rab-protein geranylgeranyltransferase complex1.25E-03
9GO:0005802: trans-Golgi network1.78E-03
10GO:0009504: cell plate2.40E-03
11GO:0000145: exocyst2.75E-03
12GO:0030173: integral component of Golgi membrane3.15E-03
13GO:0030131: clathrin adaptor complex4.31E-03
14GO:0000148: 1,3-beta-D-glucan synthase complex4.93E-03
15GO:0000784: nuclear chromosome, telomeric region4.93E-03
16GO:0005794: Golgi apparatus5.01E-03
17GO:0016020: membrane6.69E-03
18GO:0030125: clathrin vesicle coat6.99E-03
19GO:0048471: perinuclear region of cytoplasm7.73E-03
20GO:0005768: endosome7.95E-03
21GO:0009506: plasmodesma9.71E-03
22GO:0030176: integral component of endoplasmic reticulum membrane1.10E-02
23GO:0043234: protein complex1.18E-02
24GO:0005774: vacuolar membrane1.21E-02
25GO:0010008: endosome membrane1.30E-02
26GO:0005905: clathrin-coated pit1.46E-02
27GO:0005839: proteasome core complex1.46E-02
28GO:0005829: cytosol1.79E-02
29GO:0005789: endoplasmic reticulum membrane1.98E-02
30GO:0005737: cytoplasm2.11E-02
31GO:0005783: endoplasmic reticulum2.25E-02
32GO:0071944: cell periphery2.64E-02
33GO:0019005: SCF ubiquitin ligase complex3.78E-02
34GO:0005618: cell wall3.98E-02
35GO:0000786: nucleosome4.33E-02
36GO:0000139: Golgi membrane4.73E-02
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Gene type



Gene DE type