co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:0002764: immune response-regulating signaling pathway	0.00E+00
3	GO:0046109: uridine biosynthetic process	0.00E+00
4	GO:0051238: sequestering of metal ion	0.00E+00
5	GO:0000188: inactivation of MAPK activity	0.00E+00
6	GO:0006182: cGMP biosynthetic process	0.00E+00
7	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
8	GO:0010055: atrichoblast differentiation	0.00E+00
9	GO:0006468: protein phosphorylation	8.36E-09
10	GO:0042742: defense response to bacterium	9.08E-07
11	GO:0009617: response to bacterium	2.50E-05
12	GO:0009620: response to fungus	3.67E-05
13	GO:0006014: D-ribose metabolic process	9.62E-05
14	GO:0071456: cellular response to hypoxia	1.08E-04
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.43E-04
16	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.43E-04
17	GO:1901183: positive regulation of camalexin biosynthetic process	2.43E-04
18	GO:0032107: regulation of response to nutrient levels	2.43E-04
19	GO:0046167: glycerol-3-phosphate biosynthetic process	2.43E-04
20	GO:0051938: L-glutamate import	2.43E-04
21	GO:0010120: camalexin biosynthetic process	2.74E-04
22	GO:0010204: defense response signaling pathway, resistance gene-independent	2.74E-04
23	GO:0009627: systemic acquired resistance	4.91E-04
24	GO:0006641: triglyceride metabolic process	5.39E-04
25	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	5.39E-04
26	GO:0043066: negative regulation of apoptotic process	5.39E-04
27	GO:0015865: purine nucleotide transport	5.39E-04
28	GO:0043091: L-arginine import	5.39E-04
29	GO:0080183: response to photooxidative stress	5.39E-04
30	GO:0015802: basic amino acid transport	5.39E-04
31	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.45E-04
32	GO:0009817: defense response to fungus, incompatible interaction	5.99E-04
33	GO:0009407: toxin catabolic process	6.77E-04
34	GO:0019563: glycerol catabolic process	8.75E-04
35	GO:0016045: detection of bacterium	8.75E-04
36	GO:0010359: regulation of anion channel activity	8.75E-04
37	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	8.75E-04
38	GO:0000162: tryptophan biosynthetic process	9.63E-04
39	GO:0009751: response to salicylic acid	9.92E-04
40	GO:0050832: defense response to fungus	1.08E-03
41	GO:0007166: cell surface receptor signaling pathway	1.13E-03
42	GO:0046902: regulation of mitochondrial membrane permeability	1.25E-03
43	GO:0072334: UDP-galactose transmembrane transport	1.25E-03
44	GO:0006072: glycerol-3-phosphate metabolic process	1.25E-03
45	GO:0009399: nitrogen fixation	1.25E-03
46	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.25E-03
47	GO:0033169: histone H3-K9 demethylation	1.25E-03
48	GO:0009636: response to toxic substance	1.28E-03
49	GO:0016998: cell wall macromolecule catabolic process	1.28E-03
50	GO:0033358: UDP-L-arabinose biosynthetic process	1.67E-03
51	GO:0010188: response to microbial phytotoxin	1.67E-03
52	GO:0006542: glutamine biosynthetic process	1.67E-03
53	GO:0045227: capsule polysaccharide biosynthetic process	1.67E-03
54	GO:0006885: regulation of pH	2.09E-03
55	GO:0010225: response to UV-C	2.13E-03
56	GO:0009697: salicylic acid biosynthetic process	2.13E-03
57	GO:0005513: detection of calcium ion	2.13E-03
58	GO:0019252: starch biosynthetic process	2.40E-03
59	GO:0009851: auxin biosynthetic process	2.40E-03
60	GO:0006561: proline biosynthetic process	2.62E-03
61	GO:0010942: positive regulation of cell death	2.62E-03
62	GO:0015691: cadmium ion transport	2.62E-03
63	GO:0010256: endomembrane system organization	2.62E-03
64	GO:0010252: auxin homeostasis	3.11E-03
65	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.15E-03
66	GO:0042372: phylloquinone biosynthetic process	3.15E-03
67	GO:0006904: vesicle docking involved in exocytosis	3.31E-03
68	GO:0009615: response to virus	3.71E-03
69	GO:1900056: negative regulation of leaf senescence	3.72E-03
70	GO:0019745: pentacyclic triterpenoid biosynthetic process	3.72E-03
71	GO:0050829: defense response to Gram-negative bacterium	3.72E-03
72	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.72E-03
73	GO:0009808: lignin metabolic process	4.93E-03
74	GO:0009699: phenylpropanoid biosynthetic process	4.93E-03
75	GO:0010150: leaf senescence	5.03E-03
76	GO:0006952: defense response	5.34E-03
77	GO:0009821: alkaloid biosynthetic process	5.59E-03
78	GO:0045087: innate immune response	6.13E-03
79	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.27E-03
80	GO:0008202: steroid metabolic process	6.27E-03
81	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.99E-03
82	GO:0006032: chitin catabolic process	6.99E-03
83	GO:0009688: abscisic acid biosynthetic process	6.99E-03
84	GO:0009682: induced systemic resistance	7.73E-03
85	GO:0052544: defense response by callose deposition in cell wall	7.73E-03
86	GO:0009089: lysine biosynthetic process via diaminopimelate	7.73E-03
87	GO:0051707: response to other organism	7.90E-03
88	GO:0012501: programmed cell death	8.49E-03
89	GO:0002213: defense response to insect	8.49E-03
90	GO:0000266: mitochondrial fission	8.49E-03
91	GO:0006855: drug transmembrane transport	9.23E-03
92	GO:0006626: protein targeting to mitochondrion	9.29E-03
93	GO:0055046: microgametogenesis	9.29E-03
94	GO:0009718: anthocyanin-containing compound biosynthetic process	9.29E-03
95	GO:0006812: cation transport	9.93E-03
96	GO:0002237: response to molecule of bacterial origin	1.01E-02
97	GO:0009809: lignin biosynthetic process	1.07E-02
98	GO:0006813: potassium ion transport	1.07E-02
99	GO:0010224: response to UV-B	1.10E-02
100	GO:0070588: calcium ion transmembrane transport	1.10E-02
101	GO:0009969: xyloglucan biosynthetic process	1.10E-02
102	GO:0009225: nucleotide-sugar metabolic process	1.10E-02
103	GO:0080147: root hair cell development	1.27E-02
104	GO:0005992: trehalose biosynthetic process	1.27E-02
105	GO:0009626: plant-type hypersensitive response	1.35E-02
106	GO:0006874: cellular calcium ion homeostasis	1.37E-02
107	GO:0003333: amino acid transmembrane transport	1.46E-02
108	GO:0035428: hexose transmembrane transport	1.56E-02
109	GO:0031348: negative regulation of defense response	1.56E-02
110	GO:0010227: floral organ abscission	1.66E-02
111	GO:0006012: galactose metabolic process	1.66E-02
112	GO:0010584: pollen exine formation	1.76E-02
113	GO:0019722: calcium-mediated signaling	1.76E-02
114	GO:0009561: megagametogenesis	1.76E-02
115	GO:0009306: protein secretion	1.76E-02
116	GO:0032259: methylation	1.79E-02
117	GO:0042391: regulation of membrane potential	1.97E-02
118	GO:0010118: stomatal movement	1.97E-02
119	GO:0046323: glucose import	2.07E-02
120	GO:0042752: regulation of circadian rhythm	2.18E-02
121	GO:0006623: protein targeting to vacuole	2.29E-02
122	GO:0002229: defense response to oomycetes	2.41E-02
123	GO:0010193: response to ozone	2.41E-02
124	GO:0016032: viral process	2.52E-02
125	GO:0009630: gravitropism	2.52E-02
126	GO:0006979: response to oxidative stress	3.09E-02
127	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.26E-02
128	GO:0009607: response to biotic stimulus	3.26E-02
129	GO:0042128: nitrate assimilation	3.39E-02
130	GO:0006950: response to stress	3.52E-02
131	GO:0030244: cellulose biosynthetic process	3.78E-02
132	GO:0008219: cell death	3.78E-02
133	GO:0006499: N-terminal protein myristoylation	4.05E-02
134	GO:0048527: lateral root development	4.19E-02
135	GO:0007568: aging	4.19E-02
136	GO:0016310: phosphorylation	4.35E-02
137	GO:0016051: carbohydrate biosynthetic process	4.48E-02
138	GO:0009723: response to ethylene	4.70E-02
139	GO:0055114: oxidation-reduction process	4.82E-02
140	GO:0006839: mitochondrial transport	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0046424: ferulate 5-hydroxylase activity	0.00E+00
2	GO:0004370: glycerol kinase activity	0.00E+00
3	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
4	GO:0004674: protein serine/threonine kinase activity	1.47E-09
5	GO:0016301: kinase activity	3.46E-08
6	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.90E-06
7	GO:0005524: ATP binding	6.13E-06
8	GO:0004383: guanylate cyclase activity	1.00E-05
9	GO:0010279: indole-3-acetic acid amido synthetase activity	4.12E-05
10	GO:0004834: tryptophan synthase activity	4.12E-05
11	GO:0050660: flavin adenine dinucleotide binding	7.16E-05
12	GO:0004747: ribokinase activity	1.32E-04
13	GO:0008865: fructokinase activity	2.22E-04
14	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.43E-04
15	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.43E-04
16	GO:0008909: isochorismate synthase activity	2.43E-04
17	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.43E-04
18	GO:0009055: electron carrier activity	2.48E-04
19	GO:0019200: carbohydrate kinase activity	5.39E-04
20	GO:0032454: histone demethylase activity (H3-K9 specific)	5.39E-04
21	GO:0004751: ribose-5-phosphate isomerase activity	8.75E-04
22	GO:0016595: glutamate binding	8.75E-04
23	GO:0004364: glutathione transferase activity	1.05E-03
24	GO:0001653: peptide receptor activity	1.25E-03
25	GO:0015181: arginine transmembrane transporter activity	1.25E-03
26	GO:0042299: lupeol synthase activity	1.25E-03
27	GO:0015189: L-lysine transmembrane transporter activity	1.25E-03
28	GO:0005313: L-glutamate transmembrane transporter activity	1.67E-03
29	GO:0019199: transmembrane receptor protein kinase activity	1.67E-03
30	GO:0016866: intramolecular transferase activity	1.67E-03
31	GO:0004031: aldehyde oxidase activity	1.67E-03
32	GO:0050302: indole-3-acetaldehyde oxidase activity	1.67E-03
33	GO:0050373: UDP-arabinose 4-epimerase activity	1.67E-03
34	GO:0005451: monovalent cation:proton antiporter activity	1.94E-03
35	GO:0005459: UDP-galactose transmembrane transporter activity	2.13E-03
36	GO:0004040: amidase activity	2.13E-03
37	GO:0005496: steroid binding	2.13E-03
38	GO:0005471: ATP:ADP antiporter activity	2.13E-03
39	GO:0004356: glutamate-ammonia ligase activity	2.13E-03
40	GO:0015299: solute:proton antiporter activity	2.24E-03
41	GO:0004866: endopeptidase inhibitor activity	2.62E-03
42	GO:0015385: sodium:proton antiporter activity	2.93E-03
43	GO:0003978: UDP-glucose 4-epimerase activity	3.15E-03
44	GO:0004033: aldo-keto reductase (NADP) activity	4.31E-03
45	GO:0030247: polysaccharide binding	4.37E-03
46	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.60E-03
47	GO:0008142: oxysterol binding	4.93E-03
48	GO:0015238: drug transmembrane transporter activity	5.08E-03
49	GO:0015174: basic amino acid transmembrane transporter activity	6.27E-03
50	GO:0031490: chromatin DNA binding	6.27E-03
51	GO:0016844: strictosidine synthase activity	6.27E-03
52	GO:0004713: protein tyrosine kinase activity	6.99E-03
53	GO:0004568: chitinase activity	6.99E-03
54	GO:0008171: O-methyltransferase activity	6.99E-03
55	GO:0000976: transcription regulatory region sequence-specific DNA binding	8.49E-03
56	GO:0051537: 2 iron, 2 sulfur cluster binding	8.55E-03
57	GO:0005388: calcium-transporting ATPase activity	9.29E-03
58	GO:0004022: alcohol dehydrogenase (NAD) activity	9.29E-03
59	GO:0030553: cGMP binding	1.10E-02
60	GO:0005217: intracellular ligand-gated ion channel activity	1.10E-02
61	GO:0004970: ionotropic glutamate receptor activity	1.10E-02
62	GO:0030552: cAMP binding	1.10E-02
63	GO:0004725: protein tyrosine phosphatase activity	1.18E-02
64	GO:0045735: nutrient reservoir activity	1.26E-02
65	GO:0001046: core promoter sequence-specific DNA binding	1.27E-02
66	GO:0005216: ion channel activity	1.37E-02
67	GO:0015035: protein disulfide oxidoreductase activity	1.57E-02
68	GO:0030246: carbohydrate binding	1.67E-02
69	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.76E-02
70	GO:0030551: cyclic nucleotide binding	1.97E-02
71	GO:0005249: voltage-gated potassium channel activity	1.97E-02
72	GO:0005355: glucose transmembrane transporter activity	2.18E-02
73	GO:0015297: antiporter activity	2.52E-02
74	GO:0005509: calcium ion binding	2.72E-02
75	GO:0008483: transaminase activity	2.88E-02
76	GO:0008168: methyltransferase activity	3.92E-02
77	GO:0004222: metalloendopeptidase activity	4.05E-02
78	GO:0030145: manganese ion binding	4.19E-02
79	GO:0008422: beta-glucosidase activity	4.76E-02
80	GO:0050661: NADP binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	1.25E-09
2	GO:0005886: plasma membrane	1.46E-07
3	GO:0070062: extracellular exosome	1.25E-03
4	GO:0005770: late endosome	2.09E-03
5	GO:0005576: extracellular region	2.67E-03
6	GO:0030173: integral component of Golgi membrane	3.15E-03
7	GO:0005829: cytosol	9.74E-03
8	GO:0030176: integral component of endoplasmic reticulum membrane	1.10E-02
9	GO:0005783: endoplasmic reticulum	2.25E-02
10	GO:0000785: chromatin	2.52E-02
11	GO:0000145: exocyst	2.52E-02
12	GO:0071944: cell periphery	2.64E-02
13	GO:0032580: Golgi cisterna membrane	2.76E-02
14	GO:0005618: cell wall	3.98E-02
15	GO:0000325: plant-type vacuole	4.19E-02