Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G34120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
2GO:0002764: immune response-regulating signaling pathway0.00E+00
3GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
4GO:0032497: detection of lipopolysaccharide0.00E+00
5GO:0010793: regulation of mRNA export from nucleus0.00E+00
6GO:0048867: stem cell fate determination0.00E+00
7GO:0000188: inactivation of MAPK activity0.00E+00
8GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.25E-04
9GO:1902265: abscisic acid homeostasis1.42E-04
10GO:0035344: hypoxanthine transport1.42E-04
11GO:0031338: regulation of vesicle fusion1.42E-04
12GO:0098721: uracil import across plasma membrane1.42E-04
13GO:0098702: adenine import across plasma membrane1.42E-04
14GO:0035266: meristem growth1.42E-04
15GO:0098710: guanine import across plasma membrane1.42E-04
16GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway1.42E-04
17GO:0007292: female gamete generation1.42E-04
18GO:0001666: response to hypoxia1.52E-04
19GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.80E-04
20GO:0006468: protein phosphorylation1.84E-04
21GO:0009682: induced systemic resistance2.49E-04
22GO:0052544: defense response by callose deposition in cell wall2.49E-04
23GO:0045087: innate immune response3.05E-04
24GO:0050994: regulation of lipid catabolic process3.25E-04
25GO:0009727: detection of ethylene stimulus3.25E-04
26GO:0051788: response to misfolded protein3.25E-04
27GO:0030003: cellular cation homeostasis3.25E-04
28GO:0042325: regulation of phosphorylation3.25E-04
29GO:0050684: regulation of mRNA processing3.25E-04
30GO:0060968: regulation of gene silencing5.33E-04
31GO:0042344: indole glucosinolate catabolic process5.33E-04
32GO:0006954: inflammatory response5.33E-04
33GO:0032784: regulation of DNA-templated transcription, elongation5.33E-04
34GO:0016045: detection of bacterium5.33E-04
35GO:1900140: regulation of seedling development5.33E-04
36GO:0010359: regulation of anion channel activity5.33E-04
37GO:0090630: activation of GTPase activity5.33E-04
38GO:0030029: actin filament-based process5.33E-04
39GO:0042256: mature ribosome assembly5.33E-04
40GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway5.33E-04
41GO:0006874: cellular calcium ion homeostasis5.65E-04
42GO:0009625: response to insect7.35E-04
43GO:0072334: UDP-galactose transmembrane transport7.63E-04
44GO:0015749: monosaccharide transport7.63E-04
45GO:0010104: regulation of ethylene-activated signaling pathway7.63E-04
46GO:0009399: nitrogen fixation7.63E-04
47GO:2001289: lipid X metabolic process7.63E-04
48GO:1901000: regulation of response to salt stress7.63E-04
49GO:0070301: cellular response to hydrogen peroxide7.63E-04
50GO:0048367: shoot system development7.96E-04
51GO:0009626: plant-type hypersensitive response8.28E-04
52GO:0010182: sugar mediated signaling pathway9.96E-04
53GO:0046323: glucose import9.96E-04
54GO:0006542: glutamine biosynthetic process1.01E-03
55GO:0009687: abscisic acid metabolic process1.01E-03
56GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly1.01E-03
57GO:0033320: UDP-D-xylose biosynthetic process1.01E-03
58GO:0048015: phosphatidylinositol-mediated signaling1.28E-03
59GO:0006090: pyruvate metabolic process1.28E-03
60GO:0005513: detection of calcium ion1.28E-03
61GO:0097428: protein maturation by iron-sulfur cluster transfer1.28E-03
62GO:0010225: response to UV-C1.28E-03
63GO:0071281: cellular response to iron ion1.38E-03
64GO:0048364: root development1.48E-03
65GO:0043248: proteasome assembly1.57E-03
66GO:0042732: D-xylose metabolic process1.57E-03
67GO:0035194: posttranscriptional gene silencing by RNA1.57E-03
68GO:0006014: D-ribose metabolic process1.57E-03
69GO:0050665: hydrogen peroxide biosynthetic process1.57E-03
70GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.57E-03
71GO:0048827: phyllome development1.57E-03
72GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation1.57E-03
73GO:0048232: male gamete generation1.57E-03
74GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.88E-03
75GO:0043966: histone H3 acetylation1.88E-03
76GO:0009612: response to mechanical stimulus1.88E-03
77GO:0006694: steroid biosynthetic process1.88E-03
78GO:0048573: photoperiodism, flowering2.05E-03
79GO:0009651: response to salt stress2.10E-03
80GO:0098869: cellular oxidant detoxification2.21E-03
81GO:0009819: drought recovery2.56E-03
82GO:0006491: N-glycan processing2.56E-03
83GO:0009690: cytokinin metabolic process2.56E-03
84GO:0006875: cellular metal ion homeostasis2.56E-03
85GO:0010078: maintenance of root meristem identity2.56E-03
86GO:0010119: regulation of stomatal movement2.61E-03
87GO:0016051: carbohydrate biosynthetic process2.86E-03
88GO:0010204: defense response signaling pathway, resistance gene-independent2.93E-03
89GO:0030968: endoplasmic reticulum unfolded protein response2.93E-03
90GO:0009808: lignin metabolic process2.93E-03
91GO:2000031: regulation of salicylic acid mediated signaling pathway2.93E-03
92GO:0009051: pentose-phosphate shunt, oxidative branch3.31E-03
93GO:0010112: regulation of systemic acquired resistance3.31E-03
94GO:0006897: endocytosis3.40E-03
95GO:0009723: response to ethylene3.97E-03
96GO:0007064: mitotic sister chromatid cohesion4.12E-03
97GO:0048829: root cap development4.12E-03
98GO:0010629: negative regulation of gene expression4.12E-03
99GO:0006816: calcium ion transport4.55E-03
100GO:0072593: reactive oxygen species metabolic process4.55E-03
101GO:0006352: DNA-templated transcription, initiation4.55E-03
102GO:0010015: root morphogenesis4.55E-03
103GO:0046777: protein autophosphorylation4.72E-03
104GO:0006813: potassium ion transport4.95E-03
105GO:0010152: pollen maturation4.99E-03
106GO:0010105: negative regulation of ethylene-activated signaling pathway4.99E-03
107GO:0071365: cellular response to auxin stimulus4.99E-03
108GO:0046686: response to cadmium ion5.37E-03
109GO:0010102: lateral root morphogenesis5.45E-03
110GO:0006108: malate metabolic process5.45E-03
111GO:0055046: microgametogenesis5.45E-03
112GO:0006886: intracellular protein transport5.67E-03
113GO:0002237: response to molecule of bacterial origin5.92E-03
114GO:0009933: meristem structural organization5.92E-03
115GO:0007034: vacuolar transport5.92E-03
116GO:0010167: response to nitrate6.41E-03
117GO:0090351: seedling development6.41E-03
118GO:0010030: positive regulation of seed germination6.41E-03
119GO:0046854: phosphatidylinositol phosphorylation6.41E-03
120GO:0009225: nucleotide-sugar metabolic process6.41E-03
121GO:0000162: tryptophan biosynthetic process6.91E-03
122GO:0009408: response to heat7.11E-03
123GO:0010073: meristem maintenance7.95E-03
124GO:0006825: copper ion transport7.95E-03
125GO:0051260: protein homooligomerization8.49E-03
126GO:0035428: hexose transmembrane transport9.05E-03
127GO:2000022: regulation of jasmonic acid mediated signaling pathway9.05E-03
128GO:0030433: ubiquitin-dependent ERAD pathway9.05E-03
129GO:0031348: negative regulation of defense response9.05E-03
130GO:0071215: cellular response to abscisic acid stimulus9.62E-03
131GO:0001944: vasculature development9.62E-03
132GO:0042742: defense response to bacterium9.66E-03
133GO:0009873: ethylene-activated signaling pathway9.84E-03
134GO:0009790: embryo development1.03E-02
135GO:0042631: cellular response to water deprivation1.14E-02
136GO:0006885: regulation of pH1.20E-02
137GO:0048544: recognition of pollen1.26E-02
138GO:0006814: sodium ion transport1.26E-02
139GO:0009749: response to glucose1.33E-02
140GO:0019252: starch biosynthetic process1.33E-02
141GO:0006470: protein dephosphorylation1.39E-02
142GO:0006635: fatty acid beta-oxidation1.39E-02
143GO:0010583: response to cyclopentenone1.46E-02
144GO:0009617: response to bacterium1.46E-02
145GO:0019760: glucosinolate metabolic process1.60E-02
146GO:0006914: autophagy1.60E-02
147GO:0016579: protein deubiquitination1.74E-02
148GO:0016126: sterol biosynthetic process1.81E-02
149GO:0010029: regulation of seed germination1.88E-02
150GO:0009816: defense response to bacterium, incompatible interaction1.88E-02
151GO:0009627: systemic acquired resistance1.96E-02
152GO:0042128: nitrate assimilation1.96E-02
153GO:0006950: response to stress2.03E-02
154GO:0016049: cell growth2.11E-02
155GO:0006511: ubiquitin-dependent protein catabolic process2.17E-02
156GO:0009817: defense response to fungus, incompatible interaction2.19E-02
157GO:0008219: cell death2.19E-02
158GO:0048366: leaf development2.23E-02
159GO:0010311: lateral root formation2.26E-02
160GO:0006499: N-terminal protein myristoylation2.34E-02
161GO:0006811: ion transport2.34E-02
162GO:0016192: vesicle-mediated transport2.47E-02
163GO:0009867: jasmonic acid mediated signaling pathway2.59E-02
164GO:0006099: tricarboxylic acid cycle2.67E-02
165GO:0009737: response to abscisic acid2.99E-02
166GO:0008283: cell proliferation3.10E-02
167GO:0051707: response to other organism3.10E-02
168GO:0009636: response to toxic substance3.37E-02
169GO:0009965: leaf morphogenesis3.37E-02
170GO:0031347: regulation of defense response3.55E-02
171GO:0006979: response to oxidative stress3.60E-02
172GO:0006812: cation transport3.65E-02
173GO:0009846: pollen germination3.65E-02
174GO:0016310: phosphorylation3.67E-02
175GO:0006486: protein glycosylation3.83E-02
176GO:0009736: cytokinin-activated signaling pathway3.83E-02
177GO:0010224: response to UV-B3.93E-02
178GO:0009733: response to auxin4.11E-02
179GO:0006096: glycolytic process4.32E-02
180GO:0016569: covalent chromatin modification4.72E-02
RankGO TermAdjusted P value
1GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
2GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
3GO:0005272: sodium channel activity0.00E+00
4GO:0019829: cation-transporting ATPase activity3.72E-06
5GO:0004674: protein serine/threonine kinase activity6.26E-06
6GO:0005524: ATP binding1.83E-05
7GO:0016301: kinase activity2.53E-05
8GO:0016303: 1-phosphatidylinositol-3-kinase activity1.42E-04
9GO:0015208: guanine transmembrane transporter activity1.42E-04
10GO:0004112: cyclic-nucleotide phosphodiesterase activity1.42E-04
11GO:0015294: solute:cation symporter activity1.42E-04
12GO:0001102: RNA polymerase II activating transcription factor binding1.42E-04
13GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity1.42E-04
14GO:0016274: protein-arginine N-methyltransferase activity1.42E-04
15GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity1.42E-04
16GO:0015207: adenine transmembrane transporter activity1.42E-04
17GO:0009679: hexose:proton symporter activity1.42E-04
18GO:0038199: ethylene receptor activity3.25E-04
19GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity3.25E-04
20GO:0047209: coniferyl-alcohol glucosyltransferase activity3.25E-04
21GO:0017025: TBP-class protein binding4.15E-04
22GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity5.33E-04
23GO:0003955: NAD(P)H dehydrogenase (quinone) activity5.33E-04
24GO:0004383: guanylate cyclase activity5.33E-04
25GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity5.33E-04
26GO:0001653: peptide receptor activity7.63E-04
27GO:0004108: citrate (Si)-synthase activity7.63E-04
28GO:0051740: ethylene binding7.63E-04
29GO:0015210: uracil transmembrane transporter activity1.01E-03
30GO:0004470: malic enzyme activity1.01E-03
31GO:0019199: transmembrane receptor protein kinase activity1.01E-03
32GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.01E-03
33GO:0004834: tryptophan synthase activity1.01E-03
34GO:0004737: pyruvate decarboxylase activity1.01E-03
35GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.01E-03
36GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.01E-03
37GO:0005459: UDP-galactose transmembrane transporter activity1.28E-03
38GO:0015145: monosaccharide transmembrane transporter activity1.28E-03
39GO:0008948: oxaloacetate decarboxylase activity1.28E-03
40GO:0017137: Rab GTPase binding1.28E-03
41GO:0004356: glutamate-ammonia ligase activity1.28E-03
42GO:0010294: abscisic acid glucosyltransferase activity1.28E-03
43GO:0004672: protein kinase activity1.31E-03
44GO:0019137: thioglucosidase activity1.57E-03
45GO:0036402: proteasome-activating ATPase activity1.57E-03
46GO:0030976: thiamine pyrophosphate binding1.57E-03
47GO:0048040: UDP-glucuronate decarboxylase activity1.57E-03
48GO:0015144: carbohydrate transmembrane transporter activity1.59E-03
49GO:0005351: sugar:proton symporter activity1.85E-03
50GO:0003950: NAD+ ADP-ribosyltransferase activity1.88E-03
51GO:0004747: ribokinase activity1.88E-03
52GO:0005261: cation channel activity1.88E-03
53GO:0004602: glutathione peroxidase activity1.88E-03
54GO:0070403: NAD+ binding1.88E-03
55GO:0016831: carboxy-lyase activity2.21E-03
56GO:0005096: GTPase activator activity2.38E-03
57GO:0008865: fructokinase activity2.56E-03
58GO:0005267: potassium channel activity2.93E-03
59GO:0005375: copper ion transmembrane transporter activity2.93E-03
60GO:0071949: FAD binding3.31E-03
61GO:0008417: fucosyltransferase activity3.31E-03
62GO:0030955: potassium ion binding3.71E-03
63GO:0004743: pyruvate kinase activity3.71E-03
64GO:0015020: glucuronosyltransferase activity4.12E-03
65GO:0004713: protein tyrosine kinase activity4.12E-03
66GO:0004673: protein histidine kinase activity4.12E-03
67GO:0000976: transcription regulatory region sequence-specific DNA binding4.99E-03
68GO:0004521: endoribonuclease activity4.99E-03
69GO:0005388: calcium-transporting ATPase activity5.45E-03
70GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism5.45E-03
71GO:0000155: phosphorelay sensor kinase activity5.45E-03
72GO:0005262: calcium channel activity5.45E-03
73GO:0019888: protein phosphatase regulator activity5.45E-03
74GO:0005217: intracellular ligand-gated ion channel activity6.41E-03
75GO:0004970: ionotropic glutamate receptor activity6.41E-03
76GO:0080044: quercetin 7-O-glucosyltransferase activity6.43E-03
77GO:0080043: quercetin 3-O-glucosyltransferase activity6.43E-03
78GO:0004725: protein tyrosine phosphatase activity6.91E-03
79GO:0051536: iron-sulfur cluster binding7.42E-03
80GO:0043424: protein histidine kinase binding7.95E-03
81GO:0036459: thiol-dependent ubiquitinyl hydrolase activity8.49E-03
82GO:0005451: monovalent cation:proton antiporter activity1.14E-02
83GO:0004402: histone acetyltransferase activity1.14E-02
84GO:0016887: ATPase activity1.24E-02
85GO:0015299: solute:proton antiporter activity1.26E-02
86GO:0005355: glucose transmembrane transporter activity1.26E-02
87GO:0010181: FMN binding1.26E-02
88GO:0008194: UDP-glycosyltransferase activity1.36E-02
89GO:0004843: thiol-dependent ubiquitin-specific protease activity1.39E-02
90GO:0000156: phosphorelay response regulator activity1.53E-02
91GO:0015385: sodium:proton antiporter activity1.53E-02
92GO:0005200: structural constituent of cytoskeleton1.67E-02
93GO:0046982: protein heterodimerization activity1.86E-02
94GO:0000287: magnesium ion binding1.86E-02
95GO:0008375: acetylglucosaminyltransferase activity1.96E-02
96GO:0102483: scopolin beta-glucosidase activity2.03E-02
97GO:0030247: polysaccharide binding2.03E-02
98GO:0030246: carbohydrate binding2.14E-02
99GO:0008422: beta-glucosidase activity2.76E-02
100GO:0005198: structural molecule activity3.37E-02
101GO:0051287: NAD binding3.55E-02
102GO:0031625: ubiquitin protein ligase binding4.12E-02
103GO:0022857: transmembrane transporter activity4.72E-02
RankGO TermAdjusted P value
1GO:0005942: phosphatidylinositol 3-kinase complex0.00E+00
2GO:0005886: plasma membrane1.48E-08
3GO:0016021: integral component of membrane1.37E-04
4GO:0000124: SAGA complex3.25E-04
5GO:0042406: extrinsic component of endoplasmic reticulum membrane5.33E-04
6GO:0005776: autophagosome1.01E-03
7GO:0005847: mRNA cleavage and polyadenylation specificity factor complex1.28E-03
8GO:0005783: endoplasmic reticulum1.29E-03
9GO:0016363: nuclear matrix1.88E-03
10GO:0031597: cytosolic proteasome complex1.88E-03
11GO:0000815: ESCRT III complex1.88E-03
12GO:0030173: integral component of Golgi membrane1.88E-03
13GO:0031595: nuclear proteasome complex2.21E-03
14GO:0005669: transcription factor TFIID complex2.56E-03
15GO:0030131: clathrin adaptor complex2.56E-03
16GO:0016020: membrane2.83E-03
17GO:0008540: proteasome regulatory particle, base subcomplex3.71E-03
18GO:0030125: clathrin vesicle coat4.12E-03
19GO:0048471: perinuclear region of cytoplasm4.55E-03
20GO:0005789: endoplasmic reticulum membrane5.19E-03
21GO:0030176: integral component of endoplasmic reticulum membrane6.41E-03
22GO:0012505: endomembrane system6.83E-03
23GO:0005905: clathrin-coated pit8.49E-03
24GO:0031410: cytoplasmic vesicle9.05E-03
25GO:0005794: Golgi apparatus1.40E-02
26GO:0032580: Golgi cisterna membrane1.60E-02
27GO:0005777: peroxisome1.76E-02
28GO:0005774: vacuolar membrane2.13E-02
29GO:0000151: ubiquitin ligase complex2.19E-02
30GO:0000786: nucleosome2.51E-02
31GO:0005768: endosome3.13E-02
32GO:0005829: cytosol3.32E-02
33GO:0043231: intracellular membrane-bounded organelle3.81E-02
34GO:0009506: plasmodesma3.82E-02
35GO:0000502: proteasome complex3.83E-02
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Gene type



Gene DE type