Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G33666

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002184: cytoplasmic translational termination0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0006223: uracil salvage0.00E+00
6GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
7GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
8GO:0015670: carbon dioxide transport0.00E+00
9GO:0042371: vitamin K biosynthetic process0.00E+00
10GO:0006412: translation5.54E-10
11GO:0032544: plastid translation3.13E-09
12GO:0015979: photosynthesis1.22E-08
13GO:0042254: ribosome biogenesis3.19E-08
14GO:0009773: photosynthetic electron transport in photosystem I1.68E-06
15GO:0016120: carotene biosynthetic process1.88E-06
16GO:0010207: photosystem II assembly4.19E-06
17GO:0006810: transport9.72E-05
18GO:0032543: mitochondrial translation1.40E-04
19GO:0031365: N-terminal protein amino acid modification1.40E-04
20GO:0006833: water transport1.61E-04
21GO:0042372: phylloquinone biosynthetic process2.71E-04
22GO:0071588: hydrogen peroxide mediated signaling pathway3.86E-04
23GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.86E-04
24GO:0051180: vitamin transport3.86E-04
25GO:0030974: thiamine pyrophosphate transport3.86E-04
26GO:0046520: sphingoid biosynthetic process3.86E-04
27GO:1904966: positive regulation of vitamin E biosynthetic process3.86E-04
28GO:0010442: guard cell morphogenesis3.86E-04
29GO:0000481: maturation of 5S rRNA3.86E-04
30GO:1904964: positive regulation of phytol biosynthetic process3.86E-04
31GO:0043686: co-translational protein modification3.86E-04
32GO:0046167: glycerol-3-phosphate biosynthetic process3.86E-04
33GO:1902458: positive regulation of stomatal opening3.86E-04
34GO:0034337: RNA folding3.86E-04
35GO:0034220: ion transmembrane transport4.33E-04
36GO:0046620: regulation of organ growth4.40E-04
37GO:0055114: oxidation-reduction process4.70E-04
38GO:0010206: photosystem II repair6.44E-04
39GO:0052541: plant-type cell wall cellulose metabolic process8.38E-04
40GO:1902326: positive regulation of chlorophyll biosynthetic process8.38E-04
41GO:0015893: drug transport8.38E-04
42GO:0034755: iron ion transmembrane transport8.38E-04
43GO:0006650: glycerophospholipid metabolic process8.38E-04
44GO:0006729: tetrahydrobiopterin biosynthetic process8.38E-04
45GO:1903426: regulation of reactive oxygen species biosynthetic process8.38E-04
46GO:0010027: thylakoid membrane organization9.96E-04
47GO:0009658: chloroplast organization1.16E-03
48GO:0006006: glucose metabolic process1.32E-03
49GO:0046168: glycerol-3-phosphate catabolic process1.36E-03
50GO:0006954: inflammatory response1.36E-03
51GO:0006518: peptide metabolic process1.36E-03
52GO:2001295: malonyl-CoA biosynthetic process1.36E-03
53GO:0018298: protein-chromophore linkage1.39E-03
54GO:0010143: cutin biosynthetic process1.48E-03
55GO:0006636: unsaturated fatty acid biosynthetic process1.85E-03
56GO:0071484: cellular response to light intensity1.96E-03
57GO:0006072: glycerol-3-phosphate metabolic process1.96E-03
58GO:0006424: glutamyl-tRNA aminoacylation1.96E-03
59GO:0046739: transport of virus in multicellular host1.96E-03
60GO:1901332: negative regulation of lateral root development1.96E-03
61GO:0055070: copper ion homeostasis1.96E-03
62GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.96E-03
63GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.96E-03
64GO:0006633: fatty acid biosynthetic process2.24E-03
65GO:0009735: response to cytokinin2.28E-03
66GO:0061077: chaperone-mediated protein folding2.49E-03
67GO:0009926: auxin polar transport2.60E-03
68GO:0009765: photosynthesis, light harvesting2.63E-03
69GO:2000122: negative regulation of stomatal complex development2.63E-03
70GO:0044206: UMP salvage2.63E-03
71GO:0010037: response to carbon dioxide2.63E-03
72GO:0006808: regulation of nitrogen utilization2.63E-03
73GO:0015976: carbon utilization2.63E-03
74GO:0009306: protein secretion3.24E-03
75GO:0043097: pyrimidine nucleoside salvage3.37E-03
76GO:0006564: L-serine biosynthetic process3.37E-03
77GO:0010236: plastoquinone biosynthetic process3.37E-03
78GO:0045038: protein import into chloroplast thylakoid membrane3.37E-03
79GO:0035434: copper ion transmembrane transport3.37E-03
80GO:0006461: protein complex assembly3.37E-03
81GO:0016123: xanthophyll biosynthetic process3.37E-03
82GO:0016117: carotenoid biosynthetic process3.51E-03
83GO:0042335: cuticle development3.79E-03
84GO:0000413: protein peptidyl-prolyl isomerization3.79E-03
85GO:0016554: cytidine to uridine editing4.17E-03
86GO:0010190: cytochrome b6f complex assembly4.17E-03
87GO:0006206: pyrimidine nucleobase metabolic process4.17E-03
88GO:0032973: amino acid export4.17E-03
89GO:0006596: polyamine biosynthetic process4.17E-03
90GO:0018258: protein O-linked glycosylation via hydroxyproline4.17E-03
91GO:0048759: xylem vessel member cell differentiation4.17E-03
92GO:0010405: arabinogalactan protein metabolic process4.17E-03
93GO:0042549: photosystem II stabilization4.17E-03
94GO:0009955: adaxial/abaxial pattern specification5.02E-03
95GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)5.02E-03
96GO:0006694: steroid biosynthetic process5.02E-03
97GO:1901259: chloroplast rRNA processing5.02E-03
98GO:0030488: tRNA methylation5.02E-03
99GO:0009854: oxidative photosynthetic carbon pathway5.02E-03
100GO:0010019: chloroplast-nucleus signaling pathway5.02E-03
101GO:0016132: brassinosteroid biosynthetic process5.05E-03
102GO:0032502: developmental process5.39E-03
103GO:0009772: photosynthetic electron transport in photosystem II5.94E-03
104GO:0043090: amino acid import5.94E-03
105GO:0030497: fatty acid elongation5.94E-03
106GO:0010196: nonphotochemical quenching5.94E-03
107GO:0010444: guard mother cell differentiation5.94E-03
108GO:0006400: tRNA modification5.94E-03
109GO:0006401: RNA catabolic process5.94E-03
110GO:0030091: protein repair6.90E-03
111GO:0042255: ribosome assembly6.90E-03
112GO:0006605: protein targeting6.90E-03
113GO:0032508: DNA duplex unwinding6.90E-03
114GO:2000070: regulation of response to water deprivation6.90E-03
115GO:0015996: chlorophyll catabolic process7.92E-03
116GO:0007186: G-protein coupled receptor signaling pathway7.92E-03
117GO:0010497: plasmodesmata-mediated intercellular transport7.92E-03
118GO:0009657: plastid organization7.92E-03
119GO:0009808: lignin metabolic process7.92E-03
120GO:0010411: xyloglucan metabolic process8.62E-03
121GO:0009051: pentose-phosphate shunt, oxidative branch8.99E-03
122GO:0090305: nucleic acid phosphodiester bond hydrolysis8.99E-03
123GO:0080144: amino acid homeostasis8.99E-03
124GO:0000902: cell morphogenesis8.99E-03
125GO:0010205: photoinhibition1.01E-02
126GO:0009638: phototropism1.01E-02
127GO:1900865: chloroplast RNA modification1.01E-02
128GO:0043069: negative regulation of programmed cell death1.13E-02
129GO:0048829: root cap development1.13E-02
130GO:0000038: very long-chain fatty acid metabolic process1.25E-02
131GO:0019684: photosynthesis, light reaction1.25E-02
132GO:0009089: lysine biosynthetic process via diaminopimelate1.25E-02
133GO:0043085: positive regulation of catalytic activity1.25E-02
134GO:0006879: cellular iron ion homeostasis1.25E-02
135GO:0018119: peptidyl-cysteine S-nitrosylation1.25E-02
136GO:0034599: cellular response to oxidative stress1.27E-02
137GO:0016024: CDP-diacylglycerol biosynthetic process1.38E-02
138GO:0045037: protein import into chloroplast stroma1.38E-02
139GO:0055085: transmembrane transport1.39E-02
140GO:0009725: response to hormone1.51E-02
141GO:0009767: photosynthetic electron transport chain1.51E-02
142GO:0042546: cell wall biogenesis1.63E-02
143GO:0019253: reductive pentose-phosphate cycle1.64E-02
144GO:0010025: wax biosynthetic process1.92E-02
145GO:0006071: glycerol metabolic process1.92E-02
146GO:0009826: unidimensional cell growth1.99E-02
147GO:0009116: nucleoside metabolic process2.07E-02
148GO:0000027: ribosomal large subunit assembly2.07E-02
149GO:0010026: trichome differentiation2.22E-02
150GO:0009768: photosynthesis, light harvesting in photosystem I2.22E-02
151GO:0031408: oxylipin biosynthetic process2.37E-02
152GO:0003333: amino acid transmembrane transport2.37E-02
153GO:0042127: regulation of cell proliferation2.86E-02
154GO:0009416: response to light stimulus2.96E-02
155GO:0010087: phloem or xylem histogenesis3.20E-02
156GO:0006662: glycerol ether metabolic process3.38E-02
157GO:0010182: sugar mediated signaling pathway3.38E-02
158GO:0045454: cell redox homeostasis3.42E-02
159GO:0009733: response to auxin3.72E-02
160GO:0008654: phospholipid biosynthetic process3.74E-02
161GO:0006869: lipid transport3.83E-02
162GO:0002229: defense response to oomycetes3.92E-02
163GO:0000302: response to reactive oxygen species3.92E-02
164GO:0010583: response to cyclopentenone4.11E-02
165GO:0042744: hydrogen peroxide catabolic process4.29E-02
166GO:1901657: glycosyl compound metabolic process4.30E-02
167GO:0008152: metabolic process4.98E-02
RankGO TermAdjusted P value
1GO:0050614: delta24-sterol reductase activity0.00E+00
2GO:0045436: lycopene beta cyclase activity0.00E+00
3GO:0008859: exoribonuclease II activity0.00E+00
4GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
5GO:0008887: glycerate kinase activity0.00E+00
6GO:0010487: thermospermine synthase activity0.00E+00
7GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
8GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
9GO:0045435: lycopene epsilon cyclase activity0.00E+00
10GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
11GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
12GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
13GO:0019843: rRNA binding1.44E-15
14GO:0003735: structural constituent of ribosome3.48E-11
15GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.27E-08
16GO:0005528: FK506 binding2.22E-07
17GO:0000170: sphingosine hydroxylase activity3.86E-04
18GO:0090422: thiamine pyrophosphate transporter activity3.86E-04
19GO:0080132: fatty acid alpha-hydroxylase activity3.86E-04
20GO:0042586: peptide deformylase activity3.86E-04
21GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity3.86E-04
22GO:0005080: protein kinase C binding3.86E-04
23GO:0016768: spermine synthase activity3.86E-04
24GO:0000248: C-5 sterol desaturase activity3.86E-04
25GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.37E-04
26GO:0042284: sphingolipid delta-4 desaturase activity8.38E-04
27GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.38E-04
28GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity8.38E-04
29GO:0042389: omega-3 fatty acid desaturase activity8.38E-04
30GO:0004617: phosphoglycerate dehydrogenase activity8.38E-04
31GO:0015250: water channel activity9.96E-04
32GO:0016168: chlorophyll binding1.07E-03
33GO:0016531: copper chaperone activity1.36E-03
34GO:0019829: cation-transporting ATPase activity1.36E-03
35GO:0017150: tRNA dihydrouridine synthase activity1.36E-03
36GO:0050734: hydroxycinnamoyltransferase activity1.36E-03
37GO:0004148: dihydrolipoyl dehydrogenase activity1.36E-03
38GO:0004075: biotin carboxylase activity1.36E-03
39GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.36E-03
40GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.36E-03
41GO:0043023: ribosomal large subunit binding1.96E-03
42GO:0004345: glucose-6-phosphate dehydrogenase activity2.63E-03
43GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.63E-03
44GO:0010328: auxin influx transmembrane transporter activity2.63E-03
45GO:0052793: pectin acetylesterase activity2.63E-03
46GO:0043495: protein anchor2.63E-03
47GO:0004659: prenyltransferase activity2.63E-03
48GO:0004845: uracil phosphoribosyltransferase activity2.63E-03
49GO:0022891: substrate-specific transmembrane transporter activity2.98E-03
50GO:0051287: NAD binding3.31E-03
51GO:0009922: fatty acid elongase activity3.37E-03
52GO:0016773: phosphotransferase activity, alcohol group as acceptor3.37E-03
53GO:0004040: amidase activity3.37E-03
54GO:0003989: acetyl-CoA carboxylase activity3.37E-03
55GO:1990714: hydroxyproline O-galactosyltransferase activity4.17E-03
56GO:0004130: cytochrome-c peroxidase activity4.17E-03
57GO:0016208: AMP binding4.17E-03
58GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.17E-03
59GO:0016688: L-ascorbate peroxidase activity4.17E-03
60GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.17E-03
61GO:0005215: transporter activity4.56E-03
62GO:0051920: peroxiredoxin activity5.02E-03
63GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.02E-03
64GO:0004849: uridine kinase activity5.02E-03
65GO:0016762: xyloglucan:xyloglucosyl transferase activity5.05E-03
66GO:0008235: metalloexopeptidase activity5.94E-03
67GO:0019899: enzyme binding5.94E-03
68GO:0004033: aldo-keto reductase (NADP) activity6.90E-03
69GO:0016209: antioxidant activity6.90E-03
70GO:0005375: copper ion transmembrane transporter activity7.92E-03
71GO:0016798: hydrolase activity, acting on glycosyl bonds8.62E-03
72GO:0008889: glycerophosphodiester phosphodiesterase activity8.99E-03
73GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity9.56E-03
74GO:0005381: iron ion transmembrane transporter activity1.01E-02
75GO:0008047: enzyme activator activity1.13E-02
76GO:0004177: aminopeptidase activity1.25E-02
77GO:0050661: NADP binding1.39E-02
78GO:0000175: 3'-5'-exoribonuclease activity1.51E-02
79GO:0004565: beta-galactosidase activity1.51E-02
80GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.51E-02
81GO:0004022: alcohol dehydrogenase (NAD) activity1.51E-02
82GO:0004089: carbonate dehydratase activity1.51E-02
83GO:0031072: heat shock protein binding1.51E-02
84GO:0008266: poly(U) RNA binding1.64E-02
85GO:0015293: symporter activity1.77E-02
86GO:0008146: sulfotransferase activity1.78E-02
87GO:0016491: oxidoreductase activity1.84E-02
88GO:0016787: hydrolase activity1.87E-02
89GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.92E-02
90GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.92E-02
91GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.92E-02
92GO:0031409: pigment binding1.92E-02
93GO:0051536: iron-sulfur cluster binding2.07E-02
94GO:0003690: double-stranded DNA binding2.20E-02
95GO:0015171: amino acid transmembrane transporter activity2.35E-02
96GO:0004540: ribonuclease activity2.37E-02
97GO:0005509: calcium ion binding2.68E-02
98GO:0030570: pectate lyase activity2.69E-02
99GO:0008514: organic anion transmembrane transporter activity2.86E-02
100GO:0003727: single-stranded RNA binding2.86E-02
101GO:0047134: protein-disulfide reductase activity3.03E-02
102GO:0016746: transferase activity, transferring acyl groups3.11E-02
103GO:0008080: N-acetyltransferase activity3.38E-02
104GO:0004791: thioredoxin-disulfide reductase activity3.55E-02
105GO:0004872: receptor activity3.74E-02
106GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.88E-02
107GO:0048038: quinone binding3.92E-02
108GO:0004518: nuclease activity4.11E-02
109GO:0000156: phosphorelay response regulator activity4.30E-02
110GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.30E-02
111GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.43E-02
112GO:0016791: phosphatase activity4.49E-02
113GO:0009055: electron carrier activity4.81E-02
114GO:0016597: amino acid binding4.89E-02
RankGO TermAdjusted P value
1GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
2GO:0044391: ribosomal subunit0.00E+00
3GO:0009507: chloroplast3.76E-59
4GO:0009570: chloroplast stroma8.68E-32
5GO:0009535: chloroplast thylakoid membrane2.09E-25
6GO:0009543: chloroplast thylakoid lumen3.48E-25
7GO:0009941: chloroplast envelope1.51E-22
8GO:0009579: thylakoid3.15E-22
9GO:0031977: thylakoid lumen1.11E-18
10GO:0005840: ribosome1.41E-10
11GO:0009534: chloroplast thylakoid2.60E-10
12GO:0009654: photosystem II oxygen evolving complex5.75E-09
13GO:0030095: chloroplast photosystem II8.39E-08
14GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.27E-07
15GO:0019898: extrinsic component of membrane2.34E-06
16GO:0031969: chloroplast membrane9.74E-06
17GO:0046658: anchored component of plasma membrane1.76E-04
18GO:0042651: thylakoid membrane2.16E-04
19GO:0015934: large ribosomal subunit2.35E-04
20GO:0015935: small ribosomal subunit2.46E-04
21GO:0009547: plastid ribosome3.86E-04
22GO:0009523: photosystem II5.74E-04
23GO:0042170: plastid membrane8.38E-04
24GO:0000311: plastid large ribosomal subunit1.16E-03
25GO:0009528: plastid inner membrane1.36E-03
26GO:0009536: plastid1.95E-03
27GO:0009331: glycerol-3-phosphate dehydrogenase complex1.96E-03
28GO:0009527: plastid outer membrane2.63E-03
29GO:0000178: exosome (RNase complex)3.37E-03
30GO:0009533: chloroplast stromal thylakoid5.94E-03
31GO:0016020: membrane6.21E-03
32GO:0010319: stromule6.51E-03
33GO:0031225: anchored component of membrane6.54E-03
34GO:0009539: photosystem II reaction center7.92E-03
35GO:0022626: cytosolic ribosome8.52E-03
36GO:0016021: integral component of membrane8.69E-03
37GO:0005763: mitochondrial small ribosomal subunit8.99E-03
38GO:0048046: apoplast1.05E-02
39GO:0032040: small-subunit processome1.38E-02
40GO:0000312: plastid small ribosomal subunit1.64E-02
41GO:0030076: light-harvesting complex1.78E-02
42GO:0009532: plastid stroma2.37E-02
43GO:0009706: chloroplast inner membrane3.02E-02
44GO:0009522: photosystem I3.55E-02
45GO:0009505: plant-type cell wall4.45E-02
46GO:0005778: peroxisomal membrane4.69E-02
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Gene type



Gene DE type