co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G33100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0071327: cellular response to trehalose stimulus	0.00E+00
3	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
4	GO:1900367: positive regulation of defense response to insect	0.00E+00
5	GO:0010150: leaf senescence	1.34E-06
6	GO:0080142: regulation of salicylic acid biosynthetic process	3.53E-06
7	GO:0009627: systemic acquired resistance	2.97E-05
8	GO:0009737: response to abscisic acid	3.49E-05
9	GO:1900426: positive regulation of defense response to bacterium	4.74E-05
10	GO:0010230: alternative respiration	5.79E-05
11	GO:0046244: salicylic acid catabolic process	5.79E-05
12	GO:1901183: positive regulation of camalexin biosynthetic process	5.79E-05
13	GO:0009968: negative regulation of signal transduction	5.79E-05
14	GO:0034975: protein folding in endoplasmic reticulum	5.79E-05
15	GO:0043547: positive regulation of GTPase activity	5.79E-05
16	GO:0006422: aspartyl-tRNA aminoacylation	5.79E-05
17	GO:0033306: phytol metabolic process	5.79E-05
18	GO:0051707: response to other organism	8.09E-05
19	GO:0031349: positive regulation of defense response	1.41E-04
20	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.41E-04
21	GO:0002221: pattern recognition receptor signaling pathway	1.41E-04
22	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.41E-04
23	GO:0010618: aerenchyma formation	1.41E-04
24	GO:0000027: ribosomal large subunit assembly	1.52E-04
25	GO:0009625: response to insect	2.26E-04
26	GO:0002230: positive regulation of defense response to virus by host	2.40E-04
27	GO:0072661: protein targeting to plasma membrane	2.40E-04
28	GO:0010272: response to silver ion	2.40E-04
29	GO:1902290: positive regulation of defense response to oomycetes	3.49E-04
30	GO:0002239: response to oomycetes	3.49E-04
31	GO:0000302: response to reactive oxygen species	3.87E-04
32	GO:0015031: protein transport	4.45E-04
33	GO:0000460: maturation of 5.8S rRNA	4.66E-04
34	GO:0007166: cell surface receptor signaling pathway	5.03E-04
35	GO:0009617: response to bacterium	5.31E-04
36	GO:0009816: defense response to bacterium, incompatible interaction	5.85E-04
37	GO:0010225: response to UV-C	5.92E-04
38	GO:0018258: protein O-linked glycosylation via hydroxyproline	7.24E-04
39	GO:0045040: protein import into mitochondrial outer membrane	7.24E-04
40	GO:0010942: positive regulation of cell death	7.24E-04
41	GO:0010405: arabinogalactan protein metabolic process	7.24E-04
42	GO:0000470: maturation of LSU-rRNA	7.24E-04
43	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	7.24E-04
44	GO:0009612: response to mechanical stimulus	8.63E-04
45	GO:0010310: regulation of hydrogen peroxide metabolic process	8.63E-04
46	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.63E-04
47	GO:0000911: cytokinesis by cell plate formation	8.63E-04
48	GO:1900057: positive regulation of leaf senescence	1.01E-03
49	GO:1900056: negative regulation of leaf senescence	1.01E-03
50	GO:0016192: vesicle-mediated transport	1.02E-03
51	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.16E-03
52	GO:0009819: drought recovery	1.16E-03
53	GO:0043562: cellular response to nitrogen levels	1.32E-03
54	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.32E-03
55	GO:0009699: phenylpropanoid biosynthetic process	1.32E-03
56	GO:0019432: triglyceride biosynthetic process	1.48E-03
57	GO:0042742: defense response to bacterium	1.54E-03
58	GO:0006952: defense response	1.60E-03
59	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.65E-03
60	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.65E-03
61	GO:0006032: chitin catabolic process	1.83E-03
62	GO:0009626: plant-type hypersensitive response	1.90E-03
63	GO:0000272: polysaccharide catabolic process	2.02E-03
64	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.21E-03
65	GO:0002213: defense response to insect	2.21E-03
66	GO:0006626: protein targeting to mitochondrion	2.41E-03
67	GO:0070588: calcium ion transmembrane transport	2.82E-03
68	GO:0042343: indole glucosinolate metabolic process	2.82E-03
69	GO:0000162: tryptophan biosynthetic process	3.04E-03
70	GO:0006468: protein phosphorylation	3.08E-03
71	GO:2000377: regulation of reactive oxygen species metabolic process	3.26E-03
72	GO:0016998: cell wall macromolecule catabolic process	3.72E-03
73	GO:0098542: defense response to other organism	3.72E-03
74	GO:0009814: defense response, incompatible interaction	3.95E-03
75	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.95E-03
76	GO:0031348: negative regulation of defense response	3.95E-03
77	GO:0019748: secondary metabolic process	3.95E-03
78	GO:0042127: regulation of cell proliferation	4.44E-03
79	GO:0009306: protein secretion	4.44E-03
80	GO:0042631: cellular response to water deprivation	4.95E-03
81	GO:0010182: sugar mediated signaling pathway	5.21E-03
82	GO:0061025: membrane fusion	5.48E-03
83	GO:0009646: response to absence of light	5.48E-03
84	GO:0009749: response to glucose	5.75E-03
85	GO:0002229: defense response to oomycetes	6.02E-03
86	GO:0016032: viral process	6.31E-03
87	GO:0006464: cellular protein modification process	6.88E-03
88	GO:0006904: vesicle docking involved in exocytosis	7.18E-03
89	GO:0000910: cytokinesis	7.47E-03
90	GO:0009414: response to water deprivation	7.56E-03
91	GO:0001666: response to hypoxia	7.78E-03
92	GO:0009615: response to virus	7.78E-03
93	GO:0009607: response to biotic stimulus	8.08E-03
94	GO:0006906: vesicle fusion	8.40E-03
95	GO:0008219: cell death	9.36E-03
96	GO:0009407: toxin catabolic process	1.00E-02
97	GO:0016042: lipid catabolic process	1.01E-02
98	GO:0009751: response to salicylic acid	1.02E-02
99	GO:0006629: lipid metabolic process	1.04E-02
100	GO:0007568: aging	1.04E-02
101	GO:0008152: metabolic process	1.14E-02
102	GO:0006099: tricarboxylic acid cycle	1.14E-02
103	GO:0009409: response to cold	1.15E-02
104	GO:0006887: exocytosis	1.25E-02
105	GO:0006631: fatty acid metabolic process	1.25E-02
106	GO:0042542: response to hydrogen peroxide	1.28E-02
107	GO:0009636: response to toxic substance	1.44E-02
108	GO:0009734: auxin-activated signaling pathway	1.46E-02
109	GO:0009846: pollen germination	1.55E-02
110	GO:0009809: lignin biosynthetic process	1.63E-02
111	GO:0006486: protein glycosylation	1.63E-02
112	GO:0055114: oxidation-reduction process	1.71E-02
113	GO:0009909: regulation of flower development	1.75E-02
114	GO:0009620: response to fungus	1.97E-02
115	GO:0009553: embryo sac development	2.05E-02
116	GO:0009790: embryo development	2.75E-02
117	GO:0006633: fatty acid biosynthetic process	2.89E-02
118	GO:0040008: regulation of growth	2.99E-02
119	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.35E-02
120	GO:0010468: regulation of gene expression	3.51E-02
121	GO:0006979: response to oxidative stress	3.76E-02
122	GO:0007049: cell cycle	4.57E-02
123	GO:0009723: response to ethylene	4.68E-02
124	GO:0048366: leaf development	4.74E-02
125	GO:0080167: response to karrikin	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
2	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
3	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	5.79E-05
4	GO:0042134: rRNA primary transcript binding	5.79E-05
5	GO:0004425: indole-3-glycerol-phosphate synthase activity	5.79E-05
6	GO:0015085: calcium ion transmembrane transporter activity	5.79E-05
7	GO:0004815: aspartate-tRNA ligase activity	5.79E-05
8	GO:0008430: selenium binding	2.40E-04
9	GO:0004930: G-protein coupled receptor activity	4.66E-04
10	GO:0004040: amidase activity	5.92E-04
11	GO:0004806: triglyceride lipase activity	6.49E-04
12	GO:0004029: aldehyde dehydrogenase (NAD) activity	7.24E-04
13	GO:1990714: hydroxyproline O-galactosyltransferase activity	7.24E-04
14	GO:0102391: decanoate--CoA ligase activity	8.63E-04
15	GO:0004144: diacylglycerol O-acyltransferase activity	8.63E-04
16	GO:0005516: calmodulin binding	9.86E-04
17	GO:0008320: protein transmembrane transporter activity	1.01E-03
18	GO:0004467: long-chain fatty acid-CoA ligase activity	1.01E-03
19	GO:0005484: SNAP receptor activity	1.14E-03
20	GO:0052747: sinapyl alcohol dehydrogenase activity	1.16E-03
21	GO:0016301: kinase activity	1.55E-03
22	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.65E-03
23	GO:0004568: chitinase activity	1.83E-03
24	GO:0045551: cinnamyl-alcohol dehydrogenase activity	2.21E-03
25	GO:0008378: galactosyltransferase activity	2.21E-03
26	GO:0016746: transferase activity, transferring acyl groups	2.21E-03
27	GO:0015095: magnesium ion transmembrane transporter activity	2.41E-03
28	GO:0005388: calcium-transporting ATPase activity	2.41E-03
29	GO:0016758: transferase activity, transferring hexosyl groups	2.61E-03
30	GO:0008061: chitin binding	2.82E-03
31	GO:0003712: transcription cofactor activity	2.82E-03
32	GO:0004190: aspartic-type endopeptidase activity	2.82E-03
33	GO:0005528: FK506 binding	3.26E-03
34	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.43E-03
35	GO:0004707: MAP kinase activity	3.72E-03
36	GO:0008194: UDP-glycosyltransferase activity	4.11E-03
37	GO:0003756: protein disulfide isomerase activity	4.44E-03
38	GO:0004674: protein serine/threonine kinase activity	4.76E-03
39	GO:0001085: RNA polymerase II transcription factor binding	5.21E-03
40	GO:0010181: FMN binding	5.48E-03
41	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.59E-03
42	GO:0051213: dioxygenase activity	7.78E-03
43	GO:0030247: polysaccharide binding	8.71E-03
44	GO:0004683: calmodulin-dependent protein kinase activity	8.71E-03
45	GO:0003824: catalytic activity	8.77E-03
46	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	9.36E-03
47	GO:0005096: GTPase activator activity	9.69E-03
48	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.04E-02
49	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.11E-02
50	GO:0000149: SNARE binding	1.18E-02
51	GO:0005524: ATP binding	1.26E-02
52	GO:0004364: glutathione transferase activity	1.28E-02
53	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.47E-02
54	GO:0016298: lipase activity	1.67E-02
55	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.97E-02
56	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.97E-02
57	GO:0022857: transmembrane transporter activity	2.01E-02
58	GO:0015035: protein disulfide oxidoreductase activity	2.14E-02
59	GO:0005515: protein binding	2.65E-02
60	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.70E-02
61	GO:0008565: protein transporter activity	2.80E-02
62	GO:0003682: chromatin binding	4.39E-02
63	GO:0008233: peptidase activity	4.86E-02
64	GO:0016491: oxidoreductase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.06E-05
2	GO:0005783: endoplasmic reticulum	3.28E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	5.79E-05
4	GO:0005789: endoplasmic reticulum membrane	1.08E-04
5	GO:0030134: ER to Golgi transport vesicle	1.41E-04
6	GO:0005901: caveola	1.41E-04
7	GO:0030658: transport vesicle membrane	3.49E-04
8	GO:0009504: cell plate	3.61E-04
9	GO:0030660: Golgi-associated vesicle membrane	4.66E-04
10	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	4.66E-04
11	GO:0005829: cytosol	7.37E-04
12	GO:0030687: preribosome, large subunit precursor	1.01E-03
13	GO:0016021: integral component of membrane	1.12E-03
14	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.16E-03
15	GO:0005742: mitochondrial outer membrane translocase complex	1.32E-03
16	GO:0031901: early endosome membrane	1.48E-03
17	GO:0005765: lysosomal membrane	2.02E-03
18	GO:0005769: early endosome	3.04E-03
19	GO:0005741: mitochondrial outer membrane	3.72E-03
20	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.44E-03
21	GO:0019898: extrinsic component of membrane	5.75E-03
22	GO:0032580: Golgi cisterna membrane	6.88E-03
23	GO:0005667: transcription factor complex	8.40E-03
24	GO:0005774: vacuolar membrane	1.01E-02
25	GO:0031201: SNARE complex	1.25E-02
26	GO:0005856: cytoskeleton	1.44E-02
27	GO:0005794: Golgi apparatus	1.58E-02
28	GO:0022626: cytosolic ribosome	1.77E-02
29	GO:0010008: endosome membrane	1.88E-02
30	GO:0010287: plastoglobule	2.37E-02
31	GO:0005623: cell	2.51E-02
32	GO:0009524: phragmoplast	2.55E-02
33	GO:0005768: endosome	3.36E-02
34	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.51E-02