GO Enrichment Analysis of Co-expressed Genes with
AT4G32330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010207: photosystem II assembly | 2.43E-09 |
| 2 | GO:0035304: regulation of protein dephosphorylation | 8.18E-08 |
| 3 | GO:0006655: phosphatidylglycerol biosynthetic process | 4.00E-06 |
| 4 | GO:0042549: photosystem II stabilization | 4.00E-06 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 1.12E-05 |
| 6 | GO:0010205: photoinhibition | 2.19E-05 |
| 7 | GO:0019684: photosynthesis, light reaction | 3.20E-05 |
| 8 | GO:0034337: RNA folding | 3.50E-05 |
| 9 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.77E-05 |
| 10 | GO:0010541: acropetal auxin transport | 8.78E-05 |
| 11 | GO:0006568: tryptophan metabolic process | 8.78E-05 |
| 12 | GO:0010289: homogalacturonan biosynthetic process | 8.78E-05 |
| 13 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 8.78E-05 |
| 14 | GO:0010160: formation of animal organ boundary | 1.52E-04 |
| 15 | GO:0090391: granum assembly | 1.52E-04 |
| 16 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.25E-04 |
| 17 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.25E-04 |
| 18 | GO:0051513: regulation of monopolar cell growth | 2.25E-04 |
| 19 | GO:0060918: auxin transport | 4.78E-04 |
| 20 | GO:1901259: chloroplast rRNA processing | 5.70E-04 |
| 21 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 5.70E-04 |
| 22 | GO:0010196: nonphotochemical quenching | 6.66E-04 |
| 23 | GO:1900057: positive regulation of leaf senescence | 6.66E-04 |
| 24 | GO:0032544: plastid translation | 8.71E-04 |
| 25 | GO:0010206: photosystem II repair | 9.78E-04 |
| 26 | GO:0006535: cysteine biosynthetic process from serine | 1.20E-03 |
| 27 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.32E-03 |
| 28 | GO:0008361: regulation of cell size | 1.44E-03 |
| 29 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.57E-03 |
| 30 | GO:0010540: basipetal auxin transport | 1.70E-03 |
| 31 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.97E-03 |
| 32 | GO:0019344: cysteine biosynthetic process | 2.12E-03 |
| 33 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.56E-03 |
| 34 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.71E-03 |
| 35 | GO:0048443: stamen development | 2.87E-03 |
| 36 | GO:0080022: primary root development | 3.20E-03 |
| 37 | GO:0000413: protein peptidyl-prolyl isomerization | 3.20E-03 |
| 38 | GO:0009958: positive gravitropism | 3.36E-03 |
| 39 | GO:0015979: photosynthesis | 4.21E-03 |
| 40 | GO:0009639: response to red or far red light | 4.42E-03 |
| 41 | GO:0009828: plant-type cell wall loosening | 4.42E-03 |
| 42 | GO:0009567: double fertilization forming a zygote and endosperm | 4.42E-03 |
| 43 | GO:0010027: thylakoid membrane organization | 4.99E-03 |
| 44 | GO:0032259: methylation | 5.21E-03 |
| 45 | GO:0010218: response to far red light | 6.40E-03 |
| 46 | GO:0009631: cold acclimation | 6.61E-03 |
| 47 | GO:0048527: lateral root development | 6.61E-03 |
| 48 | GO:0016051: carbohydrate biosynthetic process | 7.05E-03 |
| 49 | GO:0009637: response to blue light | 7.05E-03 |
| 50 | GO:0009734: auxin-activated signaling pathway | 7.65E-03 |
| 51 | GO:0009640: photomorphogenesis | 8.41E-03 |
| 52 | GO:0009926: auxin polar transport | 8.41E-03 |
| 53 | GO:0009735: response to cytokinin | 8.81E-03 |
| 54 | GO:0031347: regulation of defense response | 9.61E-03 |
| 55 | GO:0009664: plant-type cell wall organization | 9.86E-03 |
| 56 | GO:0009793: embryo development ending in seed dormancy | 9.90E-03 |
| 57 | GO:0006364: rRNA processing | 1.04E-02 |
| 58 | GO:0006633: fatty acid biosynthetic process | 1.83E-02 |
| 59 | GO:0007623: circadian rhythm | 1.96E-02 |
| 60 | GO:0009451: RNA modification | 1.99E-02 |
| 61 | GO:0009733: response to auxin | 2.20E-02 |
| 62 | GO:0009826: unidimensional cell growth | 2.60E-02 |
| 63 | GO:0009860: pollen tube growth | 2.82E-02 |
| 64 | GO:0046777: protein autophosphorylation | 3.27E-02 |
| 65 | GO:0048364: root development | 4.24E-02 |
| 66 | GO:0008152: metabolic process | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0010242: oxygen evolving activity | 0.00E+00 |
| 3 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 3.50E-05 |
| 4 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.50E-05 |
| 5 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.81E-05 |
| 6 | GO:0008266: poly(U) RNA binding | 5.08E-05 |
| 7 | GO:0005528: FK506 binding | 7.44E-05 |
| 8 | GO:0004312: fatty acid synthase activity | 8.78E-05 |
| 9 | GO:0019843: rRNA binding | 1.13E-04 |
| 10 | GO:0004751: ribose-5-phosphate isomerase activity | 1.52E-04 |
| 11 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.52E-04 |
| 12 | GO:0016851: magnesium chelatase activity | 2.25E-04 |
| 13 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 3.05E-04 |
| 14 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 4.78E-04 |
| 15 | GO:0004124: cysteine synthase activity | 5.70E-04 |
| 16 | GO:0010329: auxin efflux transmembrane transporter activity | 1.57E-03 |
| 17 | GO:0031072: heat shock protein binding | 1.57E-03 |
| 18 | GO:0009982: pseudouridine synthase activity | 1.57E-03 |
| 19 | GO:0003714: transcription corepressor activity | 2.12E-03 |
| 20 | GO:0043424: protein histidine kinase binding | 2.26E-03 |
| 21 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.56E-03 |
| 22 | GO:0003756: protein disulfide isomerase activity | 2.87E-03 |
| 23 | GO:0010181: FMN binding | 3.53E-03 |
| 24 | GO:0016168: chlorophyll binding | 5.18E-03 |
| 25 | GO:0003746: translation elongation factor activity | 7.05E-03 |
| 26 | GO:0016787: hydrolase activity | 8.97E-03 |
| 27 | GO:0051082: unfolded protein binding | 1.33E-02 |
| 28 | GO:0016746: transferase activity, transferring acyl groups | 1.36E-02 |
| 29 | GO:0005525: GTP binding | 1.59E-02 |
| 30 | GO:0004252: serine-type endopeptidase activity | 1.68E-02 |
| 31 | GO:0030170: pyridoxal phosphate binding | 1.68E-02 |
| 32 | GO:0005509: calcium ion binding | 1.81E-02 |
| 33 | GO:0003743: translation initiation factor activity | 2.19E-02 |
| 34 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.32E-02 |
| 35 | GO:0042802: identical protein binding | 2.32E-02 |
| 36 | GO:0016491: oxidoreductase activity | 2.58E-02 |
| 37 | GO:0008168: methyltransferase activity | 2.60E-02 |
| 38 | GO:0005515: protein binding | 2.63E-02 |
| 39 | GO:0003729: mRNA binding | 2.92E-02 |
| 40 | GO:0003723: RNA binding | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 6.69E-16 |
| 3 | GO:0009507: chloroplast | 9.57E-15 |
| 4 | GO:0009570: chloroplast stroma | 7.71E-10 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 1.66E-09 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.00E-08 |
| 7 | GO:0031977: thylakoid lumen | 5.24E-07 |
| 8 | GO:0009579: thylakoid | 1.28E-06 |
| 9 | GO:0009941: chloroplast envelope | 5.54E-06 |
| 10 | GO:0009515: granal stacked thylakoid | 3.50E-05 |
| 11 | GO:0030095: chloroplast photosystem II | 5.08E-05 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 8.34E-05 |
| 13 | GO:0009536: plastid | 1.15E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 1.52E-04 |
| 15 | GO:0009509: chromoplast | 1.52E-04 |
| 16 | GO:0019898: extrinsic component of membrane | 1.87E-04 |
| 17 | GO:0055035: plastid thylakoid membrane | 3.89E-04 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 6.66E-04 |
| 19 | GO:0042644: chloroplast nucleoid | 9.78E-04 |
| 20 | GO:0008180: COP9 signalosome | 9.78E-04 |
| 21 | GO:0010287: plastoglobule | 1.35E-03 |
| 22 | GO:0032040: small-subunit processome | 1.44E-03 |
| 23 | GO:0009508: plastid chromosome | 1.57E-03 |
| 24 | GO:0000312: plastid small ribosomal subunit | 1.70E-03 |
| 25 | GO:0005802: trans-Golgi network | 2.54E-03 |
| 26 | GO:0005768: endosome | 2.99E-03 |
| 27 | GO:0009522: photosystem I | 3.53E-03 |
| 28 | GO:0031969: chloroplast membrane | 3.70E-03 |
| 29 | GO:0009295: nucleoid | 4.60E-03 |
| 30 | GO:0019005: SCF ubiquitin ligase complex | 5.99E-03 |
| 31 | GO:0000502: proteasome complex | 1.04E-02 |
| 32 | GO:0022627: cytosolic small ribosomal subunit | 2.39E-02 |
| 33 | GO:0000139: Golgi membrane | 2.65E-02 |
| 34 | GO:0005794: Golgi apparatus | 4.36E-02 |