GO Enrichment Analysis of Co-expressed Genes with
AT4G32040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 2 | GO:0006858: extracellular transport | 0.00E+00 |
| 3 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 4 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 5 | GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | 0.00E+00 |
| 6 | GO:0048227: plasma membrane to endosome transport | 0.00E+00 |
| 7 | GO:0032497: detection of lipopolysaccharide | 0.00E+00 |
| 8 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 9 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 10 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 11 | GO:0009991: response to extracellular stimulus | 0.00E+00 |
| 12 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.29E-06 |
| 13 | GO:0006014: D-ribose metabolic process | 3.20E-05 |
| 14 | GO:0016559: peroxisome fission | 7.88E-05 |
| 15 | GO:0046777: protein autophosphorylation | 8.99E-05 |
| 16 | GO:0006468: protein phosphorylation | 9.16E-05 |
| 17 | GO:0019628: urate catabolic process | 1.23E-04 |
| 18 | GO:0051245: negative regulation of cellular defense response | 1.23E-04 |
| 19 | GO:0019567: arabinose biosynthetic process | 1.23E-04 |
| 20 | GO:0006481: C-terminal protein methylation | 1.23E-04 |
| 21 | GO:0035344: hypoxanthine transport | 1.23E-04 |
| 22 | GO:1902065: response to L-glutamate | 1.23E-04 |
| 23 | GO:0035494: SNARE complex disassembly | 1.23E-04 |
| 24 | GO:0098721: uracil import across plasma membrane | 1.23E-04 |
| 25 | GO:0006144: purine nucleobase metabolic process | 1.23E-04 |
| 26 | GO:0098702: adenine import across plasma membrane | 1.23E-04 |
| 27 | GO:0098710: guanine import across plasma membrane | 1.23E-04 |
| 28 | GO:0043069: negative regulation of programmed cell death | 1.75E-04 |
| 29 | GO:0045087: innate immune response | 2.37E-04 |
| 30 | GO:0000266: mitochondrial fission | 2.37E-04 |
| 31 | GO:0050684: regulation of mRNA processing | 2.86E-04 |
| 32 | GO:0007584: response to nutrient | 2.86E-04 |
| 33 | GO:0052542: defense response by callose deposition | 2.86E-04 |
| 34 | GO:0015865: purine nucleotide transport | 2.86E-04 |
| 35 | GO:0019441: tryptophan catabolic process to kynurenine | 2.86E-04 |
| 36 | GO:0019395: fatty acid oxidation | 2.86E-04 |
| 37 | GO:0015914: phospholipid transport | 2.86E-04 |
| 38 | GO:2000034: regulation of seed maturation | 4.72E-04 |
| 39 | GO:0032784: regulation of DNA-templated transcription, elongation | 4.72E-04 |
| 40 | GO:0010359: regulation of anion channel activity | 4.72E-04 |
| 41 | GO:2001289: lipid X metabolic process | 6.76E-04 |
| 42 | GO:0046902: regulation of mitochondrial membrane permeability | 6.76E-04 |
| 43 | GO:0072334: UDP-galactose transmembrane transport | 6.76E-04 |
| 44 | GO:0009399: nitrogen fixation | 6.76E-04 |
| 45 | GO:0006612: protein targeting to membrane | 6.76E-04 |
| 46 | GO:0006986: response to unfolded protein | 6.76E-04 |
| 47 | GO:0006886: intracellular protein transport | 8.02E-04 |
| 48 | GO:0061025: membrane fusion | 8.94E-04 |
| 49 | GO:0033358: UDP-L-arabinose biosynthetic process | 8.97E-04 |
| 50 | GO:0010363: regulation of plant-type hypersensitive response | 8.97E-04 |
| 51 | GO:0022622: root system development | 8.97E-04 |
| 52 | GO:0006370: 7-methylguanosine mRNA capping | 8.97E-04 |
| 53 | GO:0010107: potassium ion import | 8.97E-04 |
| 54 | GO:0034613: cellular protein localization | 8.97E-04 |
| 55 | GO:0006542: glutamine biosynthetic process | 8.97E-04 |
| 56 | GO:0010222: stem vascular tissue pattern formation | 8.97E-04 |
| 57 | GO:0045227: capsule polysaccharide biosynthetic process | 8.97E-04 |
| 58 | GO:0019252: starch biosynthetic process | 9.56E-04 |
| 59 | GO:0006635: fatty acid beta-oxidation | 1.02E-03 |
| 60 | GO:0007264: small GTPase mediated signal transduction | 1.09E-03 |
| 61 | GO:0018344: protein geranylgeranylation | 1.13E-03 |
| 62 | GO:0010225: response to UV-C | 1.13E-03 |
| 63 | GO:0006090: pyruvate metabolic process | 1.13E-03 |
| 64 | GO:0006904: vesicle docking involved in exocytosis | 1.30E-03 |
| 65 | GO:1902456: regulation of stomatal opening | 1.39E-03 |
| 66 | GO:0010337: regulation of salicylic acid metabolic process | 1.39E-03 |
| 67 | GO:0050665: hydrogen peroxide biosynthetic process | 1.39E-03 |
| 68 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.39E-03 |
| 69 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.53E-03 |
| 70 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.66E-03 |
| 71 | GO:0048280: vesicle fusion with Golgi apparatus | 1.66E-03 |
| 72 | GO:0006955: immune response | 1.95E-03 |
| 73 | GO:0019375: galactolipid biosynthetic process | 2.26E-03 |
| 74 | GO:0009867: jasmonic acid mediated signaling pathway | 2.38E-03 |
| 75 | GO:0006887: exocytosis | 2.82E-03 |
| 76 | GO:0006897: endocytosis | 2.82E-03 |
| 77 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.91E-03 |
| 78 | GO:2000280: regulation of root development | 3.26E-03 |
| 79 | GO:0010449: root meristem growth | 3.26E-03 |
| 80 | GO:0008202: steroid metabolic process | 3.26E-03 |
| 81 | GO:0006896: Golgi to vacuole transport | 3.62E-03 |
| 82 | GO:0072593: reactive oxygen species metabolic process | 4.00E-03 |
| 83 | GO:0030148: sphingolipid biosynthetic process | 4.00E-03 |
| 84 | GO:0009651: response to salt stress | 4.57E-03 |
| 85 | GO:0006108: malate metabolic process | 4.79E-03 |
| 86 | GO:0009887: animal organ morphogenesis | 5.20E-03 |
| 87 | GO:0009225: nucleotide-sugar metabolic process | 5.63E-03 |
| 88 | GO:0007031: peroxisome organization | 5.63E-03 |
| 89 | GO:0010030: positive regulation of seed germination | 5.63E-03 |
| 90 | GO:0034976: response to endoplasmic reticulum stress | 6.06E-03 |
| 91 | GO:0009742: brassinosteroid mediated signaling pathway | 6.18E-03 |
| 92 | GO:0009863: salicylic acid mediated signaling pathway | 6.51E-03 |
| 93 | GO:0009695: jasmonic acid biosynthetic process | 6.98E-03 |
| 94 | GO:0048278: vesicle docking | 7.45E-03 |
| 95 | GO:0031408: oxylipin biosynthetic process | 7.45E-03 |
| 96 | GO:0051260: protein homooligomerization | 7.45E-03 |
| 97 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.93E-03 |
| 98 | GO:0007005: mitochondrion organization | 7.93E-03 |
| 99 | GO:0006012: galactose metabolic process | 8.43E-03 |
| 100 | GO:0016310: phosphorylation | 8.49E-03 |
| 101 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 9.45E-03 |
| 102 | GO:0042147: retrograde transport, endosome to Golgi | 9.45E-03 |
| 103 | GO:0010118: stomatal movement | 9.99E-03 |
| 104 | GO:0010154: fruit development | 1.05E-02 |
| 105 | GO:0046323: glucose import | 1.05E-02 |
| 106 | GO:0009738: abscisic acid-activated signaling pathway | 1.11E-02 |
| 107 | GO:0048544: recognition of pollen | 1.11E-02 |
| 108 | GO:0006470: protein dephosphorylation | 1.15E-02 |
| 109 | GO:0007166: cell surface receptor signaling pathway | 1.15E-02 |
| 110 | GO:0006623: protein targeting to vacuole | 1.16E-02 |
| 111 | GO:0009611: response to wounding | 1.19E-02 |
| 112 | GO:0000302: response to reactive oxygen species | 1.22E-02 |
| 113 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.22E-02 |
| 114 | GO:0035556: intracellular signal transduction | 1.24E-02 |
| 115 | GO:0009630: gravitropism | 1.28E-02 |
| 116 | GO:0046686: response to cadmium ion | 1.42E-02 |
| 117 | GO:0055085: transmembrane transport | 1.57E-02 |
| 118 | GO:0009816: defense response to bacterium, incompatible interaction | 1.65E-02 |
| 119 | GO:0006970: response to osmotic stress | 1.69E-02 |
| 120 | GO:0042128: nitrate assimilation | 1.71E-02 |
| 121 | GO:0006906: vesicle fusion | 1.71E-02 |
| 122 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.78E-02 |
| 123 | GO:0009817: defense response to fungus, incompatible interaction | 1.91E-02 |
| 124 | GO:0008219: cell death | 1.91E-02 |
| 125 | GO:0010311: lateral root formation | 1.98E-02 |
| 126 | GO:0009832: plant-type cell wall biogenesis | 1.98E-02 |
| 127 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.01E-02 |
| 128 | GO:0009631: cold acclimation | 2.12E-02 |
| 129 | GO:0048527: lateral root development | 2.12E-02 |
| 130 | GO:0010119: regulation of stomatal movement | 2.12E-02 |
| 131 | GO:0016051: carbohydrate biosynthetic process | 2.26E-02 |
| 132 | GO:0006839: mitochondrial transport | 2.48E-02 |
| 133 | GO:0006397: mRNA processing | 2.99E-02 |
| 134 | GO:0031347: regulation of defense response | 3.11E-02 |
| 135 | GO:0000165: MAPK cascade | 3.11E-02 |
| 136 | GO:0055114: oxidation-reduction process | 3.17E-02 |
| 137 | GO:0010224: response to UV-B | 3.44E-02 |
| 138 | GO:0006096: glycolytic process | 3.78E-02 |
| 139 | GO:0015031: protein transport | 3.80E-02 |
| 140 | GO:0048367: shoot system development | 3.86E-02 |
| 141 | GO:0009626: plant-type hypersensitive response | 3.95E-02 |
| 142 | GO:0018105: peptidyl-serine phosphorylation | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015575: mannitol transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 3 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 4 | GO:0015591: D-ribose transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0015148: D-xylose transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0005365: myo-inositol transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 8 | GO:0015576: sorbitol transmembrane transporter activity | 0.00E+00 |
| 9 | GO:0016301: kinase activity | 3.11E-07 |
| 10 | GO:0004674: protein serine/threonine kinase activity | 3.28E-07 |
| 11 | GO:0005093: Rab GDP-dissociation inhibitor activity | 2.91E-06 |
| 12 | GO:0005524: ATP binding | 1.39E-05 |
| 13 | GO:0004747: ribokinase activity | 4.51E-05 |
| 14 | GO:0008865: fructokinase activity | 7.88E-05 |
| 15 | GO:0015208: guanine transmembrane transporter activity | 1.23E-04 |
| 16 | GO:0015294: solute:cation symporter activity | 1.23E-04 |
| 17 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.23E-04 |
| 18 | GO:0015207: adenine transmembrane transporter activity | 1.23E-04 |
| 19 | GO:0015168: glycerol transmembrane transporter activity | 1.23E-04 |
| 20 | GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | 1.23E-04 |
| 21 | GO:0005096: GTPase activator activity | 1.83E-04 |
| 22 | GO:0004484: mRNA guanylyltransferase activity | 2.86E-04 |
| 23 | GO:0003988: acetyl-CoA C-acyltransferase activity | 2.86E-04 |
| 24 | GO:0045140: inositol phosphoceramide synthase activity | 2.86E-04 |
| 25 | GO:0004061: arylformamidase activity | 2.86E-04 |
| 26 | GO:0004383: guanylate cyclase activity | 4.72E-04 |
| 27 | GO:0016595: glutamate binding | 4.72E-04 |
| 28 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 4.72E-04 |
| 29 | GO:0005483: soluble NSF attachment protein activity | 4.72E-04 |
| 30 | GO:0005354: galactose transmembrane transporter activity | 6.76E-04 |
| 31 | GO:0001653: peptide receptor activity | 6.76E-04 |
| 32 | GO:0004300: enoyl-CoA hydratase activity | 6.76E-04 |
| 33 | GO:0019905: syntaxin binding | 8.97E-04 |
| 34 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 8.97E-04 |
| 35 | GO:0015210: uracil transmembrane transporter activity | 8.97E-04 |
| 36 | GO:0004470: malic enzyme activity | 8.97E-04 |
| 37 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 8.97E-04 |
| 38 | GO:0050373: UDP-arabinose 4-epimerase activity | 8.97E-04 |
| 39 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.13E-03 |
| 40 | GO:0015145: monosaccharide transmembrane transporter activity | 1.13E-03 |
| 41 | GO:0008948: oxaloacetate decarboxylase activity | 1.13E-03 |
| 42 | GO:0017137: Rab GTPase binding | 1.13E-03 |
| 43 | GO:0005496: steroid binding | 1.13E-03 |
| 44 | GO:0005471: ATP:ADP antiporter activity | 1.13E-03 |
| 45 | GO:0004356: glutamate-ammonia ligase activity | 1.13E-03 |
| 46 | GO:0004709: MAP kinase kinase kinase activity | 1.39E-03 |
| 47 | GO:0036402: proteasome-activating ATPase activity | 1.39E-03 |
| 48 | GO:0003978: UDP-glucose 4-epimerase activity | 1.66E-03 |
| 49 | GO:0019900: kinase binding | 1.66E-03 |
| 50 | GO:0008142: oxysterol binding | 2.58E-03 |
| 51 | GO:0005267: potassium channel activity | 2.58E-03 |
| 52 | GO:0000149: SNARE binding | 2.60E-03 |
| 53 | GO:0071949: FAD binding | 2.91E-03 |
| 54 | GO:0005484: SNAP receptor activity | 3.06E-03 |
| 55 | GO:0004743: pyruvate kinase activity | 3.26E-03 |
| 56 | GO:0030955: potassium ion binding | 3.26E-03 |
| 57 | GO:0004713: protein tyrosine kinase activity | 3.62E-03 |
| 58 | GO:0004521: endoribonuclease activity | 4.39E-03 |
| 59 | GO:0022857: transmembrane transporter activity | 5.49E-03 |
| 60 | GO:0017025: TBP-class protein binding | 5.63E-03 |
| 61 | GO:0004725: protein tyrosine phosphatase activity | 6.06E-03 |
| 62 | GO:0016887: ATPase activity | 9.76E-03 |
| 63 | GO:0001085: RNA polymerase II transcription factor binding | 1.05E-02 |
| 64 | GO:0010181: FMN binding | 1.11E-02 |
| 65 | GO:0005355: glucose transmembrane transporter activity | 1.11E-02 |
| 66 | GO:0004872: receptor activity | 1.16E-02 |
| 67 | GO:0004672: protein kinase activity | 1.30E-02 |
| 68 | GO:0016791: phosphatase activity | 1.40E-02 |
| 69 | GO:0016597: amino acid binding | 1.52E-02 |
| 70 | GO:0051213: dioxygenase activity | 1.58E-02 |
| 71 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.71E-02 |
| 72 | GO:0004721: phosphoprotein phosphatase activity | 1.78E-02 |
| 73 | GO:0004683: calmodulin-dependent protein kinase activity | 1.78E-02 |
| 74 | GO:0008236: serine-type peptidase activity | 1.85E-02 |
| 75 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.12E-02 |
| 76 | GO:0030145: manganese ion binding | 2.12E-02 |
| 77 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.26E-02 |
| 78 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.41E-02 |
| 79 | GO:0004871: signal transducer activity | 2.44E-02 |
| 80 | GO:0004722: protein serine/threonine phosphatase activity | 2.55E-02 |
| 81 | GO:0009055: electron carrier activity | 3.08E-02 |
| 82 | GO:0051287: NAD binding | 3.11E-02 |
| 83 | GO:0003824: catalytic activity | 3.17E-02 |
| 84 | GO:0005515: protein binding | 3.36E-02 |
| 85 | GO:0031625: ubiquitin protein ligase binding | 3.60E-02 |
| 86 | GO:0016491: oxidoreductase activity | 3.97E-02 |
| 87 | GO:0008289: lipid binding | 3.98E-02 |
| 88 | GO:0015035: protein disulfide oxidoreductase activity | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045335: phagocytic vesicle | 0.00E+00 |
| 2 | GO:0005886: plasma membrane | 5.30E-08 |
| 3 | GO:0016021: integral component of membrane | 7.23E-08 |
| 4 | GO:0005741: mitochondrial outer membrane | 2.16E-05 |
| 5 | GO:0005778: peroxisomal membrane | 9.81E-05 |
| 6 | GO:0005829: cytosol | 1.49E-04 |
| 7 | GO:0016020: membrane | 2.50E-04 |
| 8 | GO:0031201: SNARE complex | 2.99E-04 |
| 9 | GO:0031902: late endosome membrane | 2.99E-04 |
| 10 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 4.72E-04 |
| 11 | GO:0005777: peroxisome | 6.58E-04 |
| 12 | GO:0030658: transport vesicle membrane | 6.76E-04 |
| 13 | GO:0070062: extracellular exosome | 6.76E-04 |
| 14 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 6.76E-04 |
| 15 | GO:0005783: endoplasmic reticulum | 7.86E-04 |
| 16 | GO:0000145: exocyst | 1.09E-03 |
| 17 | GO:0000164: protein phosphatase type 1 complex | 1.13E-03 |
| 18 | GO:0030140: trans-Golgi network transport vesicle | 1.39E-03 |
| 19 | GO:0031597: cytosolic proteasome complex | 1.66E-03 |
| 20 | GO:0030173: integral component of Golgi membrane | 1.66E-03 |
| 21 | GO:0031595: nuclear proteasome complex | 1.95E-03 |
| 22 | GO:0030131: clathrin adaptor complex | 2.26E-03 |
| 23 | GO:0012507: ER to Golgi transport vesicle membrane | 2.26E-03 |
| 24 | GO:0009514: glyoxysome | 2.58E-03 |
| 25 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.26E-03 |
| 26 | GO:0030125: clathrin vesicle coat | 3.62E-03 |
| 27 | GO:0005789: endoplasmic reticulum membrane | 3.72E-03 |
| 28 | GO:0048471: perinuclear region of cytoplasm | 4.00E-03 |
| 29 | GO:0005802: trans-Golgi network | 5.08E-03 |
| 30 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.63E-03 |
| 31 | GO:0043234: protein complex | 6.06E-03 |
| 32 | GO:0005905: clathrin-coated pit | 7.45E-03 |
| 33 | GO:0005770: late endosome | 1.05E-02 |
| 34 | GO:0032580: Golgi cisterna membrane | 1.40E-02 |
| 35 | GO:0005667: transcription factor complex | 1.71E-02 |
| 36 | GO:0005794: Golgi apparatus | 2.09E-02 |
| 37 | GO:0000325: plant-type vacuole | 2.12E-02 |
| 38 | GO:0005768: endosome | 2.47E-02 |
| 39 | GO:0009506: plasmodesma | 2.60E-02 |
| 40 | GO:0000502: proteasome complex | 3.35E-02 |
| 41 | GO:0005635: nuclear envelope | 3.52E-02 |
| 42 | GO:0005834: heterotrimeric G-protein complex | 3.95E-02 |
| 43 | GO:0012505: endomembrane system | 4.22E-02 |
| 44 | GO:0005774: vacuolar membrane | 4.58E-02 |
| 45 | GO:0005654: nucleoplasm | 4.95E-02 |