co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G32010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
2	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
3	GO:0000188: inactivation of MAPK activity	0.00E+00
4	GO:0006903: vesicle targeting	0.00E+00
5	GO:0010111: glyoxysome organization	0.00E+00
6	GO:0080056: petal vascular tissue pattern formation	0.00E+00
7	GO:0006858: extracellular transport	0.00E+00
8	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
9	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
10	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
11	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
12	GO:0006904: vesicle docking involved in exocytosis	2.68E-05
13	GO:0030968: endoplasmic reticulum unfolded protein response	3.77E-05
14	GO:1902065: response to L-glutamate	6.58E-05
15	GO:0006144: purine nucleobase metabolic process	6.58E-05
16	GO:0009968: negative regulation of signal transduction	6.58E-05
17	GO:0019628: urate catabolic process	6.58E-05
18	GO:0043547: positive regulation of GTPase activity	6.58E-05
19	GO:0019567: arabinose biosynthetic process	6.58E-05
20	GO:0000266: mitochondrial fission	9.59E-05
21	GO:0006996: organelle organization	1.59E-04
22	GO:0019395: fatty acid oxidation	1.59E-04
23	GO:0050684: regulation of mRNA processing	1.59E-04
24	GO:0019374: galactolipid metabolic process	1.59E-04
25	GO:0007584: response to nutrient	1.59E-04
26	GO:0009727: detection of ethylene stimulus	1.59E-04
27	GO:0071369: cellular response to ethylene stimulus	2.68E-04
28	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	2.69E-04
29	GO:0032784: regulation of DNA-templated transcription, elongation	2.69E-04
30	GO:0006986: response to unfolded protein	3.90E-04
31	GO:0006882: cellular zinc ion homeostasis	3.90E-04
32	GO:0072334: UDP-galactose transmembrane transport	3.90E-04
33	GO:0006612: protein targeting to membrane	3.90E-04
34	GO:0006893: Golgi to plasma membrane transport	3.90E-04
35	GO:0006635: fatty acid beta-oxidation	4.56E-04
36	GO:0045227: capsule polysaccharide biosynthetic process	5.20E-04
37	GO:0033358: UDP-L-arabinose biosynthetic process	5.20E-04
38	GO:0022622: root system development	5.20E-04
39	GO:0006370: 7-methylguanosine mRNA capping	5.20E-04
40	GO:0010107: potassium ion import	5.20E-04
41	GO:0007166: cell surface receptor signaling pathway	6.21E-04
42	GO:0010225: response to UV-C	6.60E-04
43	GO:0006014: D-ribose metabolic process	8.06E-04
44	GO:0019509: L-methionine salvage from methylthioadenosine	9.59E-04
45	GO:0010044: response to aluminum ion	1.12E-03
46	GO:0006401: RNA catabolic process	1.12E-03
47	GO:0006887: exocytosis	1.24E-03
48	GO:0006897: endocytosis	1.24E-03
49	GO:0046777: protein autophosphorylation	1.28E-03
50	GO:0016559: peroxisome fission	1.29E-03
51	GO:0006644: phospholipid metabolic process	1.29E-03
52	GO:0006875: cellular metal ion homeostasis	1.29E-03
53	GO:0060321: acceptance of pollen	1.47E-03
54	GO:0006886: intracellular protein transport	1.53E-03
55	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.65E-03
56	GO:0010449: root meristem growth	1.85E-03
57	GO:0008202: steroid metabolic process	1.85E-03
58	GO:0071577: zinc II ion transmembrane transport	1.85E-03
59	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.85E-03
60	GO:0006896: Golgi to vacuole transport	2.05E-03
61	GO:0030148: sphingolipid biosynthetic process	2.26E-03
62	GO:0009742: brassinosteroid mediated signaling pathway	2.68E-03
63	GO:0010588: cotyledon vascular tissue pattern formation	2.70E-03
64	GO:0071732: cellular response to nitric oxide	3.16E-03
65	GO:0010053: root epidermal cell differentiation	3.16E-03
66	GO:0009225: nucleotide-sugar metabolic process	3.16E-03
67	GO:0007031: peroxisome organization	3.16E-03
68	GO:0034976: response to endoplasmic reticulum stress	3.40E-03
69	GO:0046686: response to cadmium ion	3.89E-03
70	GO:0009695: jasmonic acid biosynthetic process	3.90E-03
71	GO:0031408: oxylipin biosynthetic process	4.17E-03
72	GO:0006468: protein phosphorylation	4.33E-03
73	GO:0030433: ubiquitin-dependent ERAD pathway	4.43E-03
74	GO:0080092: regulation of pollen tube growth	4.43E-03
75	GO:0006012: galactose metabolic process	4.70E-03
76	GO:0006470: protein dephosphorylation	4.95E-03
77	GO:0042127: regulation of cell proliferation	4.98E-03
78	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.26E-03
79	GO:0010118: stomatal movement	5.55E-03
80	GO:0010182: sugar mediated signaling pathway	5.85E-03
81	GO:0010305: leaf vascular tissue pattern formation	5.85E-03
82	GO:0009749: response to glucose	6.45E-03
83	GO:0019252: starch biosynthetic process	6.45E-03
84	GO:0010183: pollen tube guidance	6.45E-03
85	GO:0071554: cell wall organization or biogenesis	6.76E-03
86	GO:0002229: defense response to oomycetes	6.76E-03
87	GO:0009860: pollen tube growth	7.21E-03
88	GO:0071281: cellular response to iron ion	7.40E-03
89	GO:0016310: phosphorylation	7.75E-03
90	GO:0009816: defense response to bacterium, incompatible interaction	9.08E-03
91	GO:0042742: defense response to bacterium	9.67E-03
92	GO:0006888: ER to Golgi vesicle-mediated transport	9.79E-03
93	GO:0016049: cell growth	1.02E-02
94	GO:0008219: cell death	1.05E-02
95	GO:0009832: plant-type cell wall biogenesis	1.09E-02
96	GO:0009631: cold acclimation	1.17E-02
97	GO:0045087: innate immune response	1.24E-02
98	GO:0016051: carbohydrate biosynthetic process	1.24E-02
99	GO:0006397: mRNA processing	1.28E-02
100	GO:0006839: mitochondrial transport	1.36E-02
101	GO:0030001: metal ion transport	1.36E-02
102	GO:0051707: response to other organism	1.49E-02
103	GO:0000209: protein polyubiquitination	1.53E-02
104	GO:0000165: MAPK cascade	1.70E-02
105	GO:0009846: pollen germination	1.75E-02
106	GO:0006364: rRNA processing	1.84E-02
107	GO:0010224: response to UV-B	1.88E-02
108	GO:0006096: glycolytic process	2.07E-02
109	GO:0048367: shoot system development	2.12E-02
110	GO:0009611: response to wounding	2.23E-02
111	GO:0055085: transmembrane transport	2.77E-02
112	GO:0006633: fatty acid biosynthetic process	3.26E-02
113	GO:0040008: regulation of growth	3.37E-02
114	GO:0010150: leaf senescence	3.49E-02
115	GO:0009451: RNA modification	3.54E-02
116	GO:0008380: RNA splicing	3.95E-02
117	GO:0009414: response to water deprivation	4.30E-02
118	GO:0042254: ribosome biogenesis	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
2	GO:0046522: S-methyl-5-thioribose kinase activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0016301: kinase activity	1.18E-05
5	GO:0034450: ubiquitin-ubiquitin ligase activity	6.58E-05
6	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	6.58E-05
7	GO:0045140: inositol phosphoceramide synthase activity	1.59E-04
8	GO:0004484: mRNA guanylyltransferase activity	1.59E-04
9	GO:0003988: acetyl-CoA C-acyltransferase activity	1.59E-04
10	GO:0005524: ATP binding	2.46E-04
11	GO:0004300: enoyl-CoA hydratase activity	3.90E-04
12	GO:0004674: protein serine/threonine kinase activity	4.76E-04
13	GO:0050373: UDP-arabinose 4-epimerase activity	5.20E-04
14	GO:0004930: G-protein coupled receptor activity	5.20E-04
15	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	6.60E-04
16	GO:0005459: UDP-galactose transmembrane transporter activity	6.60E-04
17	GO:0004709: MAP kinase kinase kinase activity	8.06E-04
18	GO:0019900: kinase binding	9.59E-04
19	GO:0004747: ribokinase activity	9.59E-04
20	GO:0003978: UDP-glucose 4-epimerase activity	9.59E-04
21	GO:0004620: phospholipase activity	1.12E-03
22	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.29E-03
23	GO:0008865: fructokinase activity	1.29E-03
24	GO:0008142: oxysterol binding	1.47E-03
25	GO:0005267: potassium channel activity	1.47E-03
26	GO:0071949: FAD binding	1.65E-03
27	GO:0047617: acyl-CoA hydrolase activity	1.85E-03
28	GO:0030955: potassium ion binding	1.85E-03
29	GO:0004743: pyruvate kinase activity	1.85E-03
30	GO:0004521: endoribonuclease activity	2.48E-03
31	GO:0000175: 3'-5'-exoribonuclease activity	2.70E-03
32	GO:0008289: lipid binding	2.90E-03
33	GO:0004535: poly(A)-specific ribonuclease activity	2.93E-03
34	GO:0004725: protein tyrosine phosphatase activity	3.40E-03
35	GO:0005385: zinc ion transmembrane transporter activity	3.65E-03
36	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.05E-03
37	GO:0033612: receptor serine/threonine kinase binding	4.17E-03
38	GO:0008408: 3'-5' exonuclease activity	4.17E-03
39	GO:0004540: ribonuclease activity	4.17E-03
40	GO:0047134: protein-disulfide reductase activity	5.26E-03
41	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.50E-03
42	GO:0046873: metal ion transmembrane transporter activity	5.85E-03
43	GO:0001085: RNA polymerase II transcription factor binding	5.85E-03
44	GO:0004791: thioredoxin-disulfide reductase activity	6.15E-03
45	GO:0010181: FMN binding	6.15E-03
46	GO:0004518: nuclease activity	7.08E-03
47	GO:0016791: phosphatase activity	7.73E-03
48	GO:0016413: O-acetyltransferase activity	8.40E-03
49	GO:0016597: amino acid binding	8.40E-03
50	GO:0004721: phosphoprotein phosphatase activity	9.79E-03
51	GO:0005096: GTPase activator activity	1.09E-02
52	GO:0003824: catalytic activity	1.09E-02
53	GO:0004722: protein serine/threonine phosphatase activity	1.09E-02
54	GO:0005215: transporter activity	1.10E-02
55	GO:0030145: manganese ion binding	1.17E-02
56	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.17E-02
57	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.32E-02
58	GO:0035091: phosphatidylinositol binding	1.57E-02
59	GO:0016887: ATPase activity	1.91E-02
60	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.04E-02
61	GO:0008017: microtubule binding	3.60E-02
62	GO:0042802: identical protein binding	4.13E-02
63	GO:0000287: magnesium ion binding	4.69E-02
64	GO:0046982: protein heterodimerization activity	4.69E-02
65	GO:0003682: chromatin binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0045335: phagocytic vesicle	0.00E+00
2	GO:0005886: plasma membrane	7.00E-06
3	GO:0005829: cytosol	1.27E-05
4	GO:0000145: exocyst	1.97E-05
5	GO:0030131: clathrin adaptor complex	2.95E-05
6	GO:0030014: CCR4-NOT complex	6.58E-05
7	GO:0030125: clathrin vesicle coat	6.92E-05
8	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.69E-04
9	GO:0070062: extracellular exosome	3.90E-04
10	GO:0030127: COPII vesicle coat	8.06E-04
11	GO:0005777: peroxisome	8.49E-04
12	GO:0030173: integral component of Golgi membrane	9.59E-04
13	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.12E-03
14	GO:0009514: glyoxysome	1.47E-03
15	GO:0030665: clathrin-coated vesicle membrane	1.85E-03
16	GO:0010008: endosome membrane	2.18E-03
17	GO:0048471: perinuclear region of cytoplasm	2.26E-03
18	GO:0005794: Golgi apparatus	2.75E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	3.16E-03
20	GO:0009524: phragmoplast	3.32E-03
21	GO:0043234: protein complex	3.40E-03
22	GO:0005741: mitochondrial outer membrane	4.17E-03
23	GO:0005905: clathrin-coated pit	4.17E-03
24	GO:0030136: clathrin-coated vesicle	5.26E-03
25	GO:0032580: Golgi cisterna membrane	7.73E-03
26	GO:0005778: peroxisomal membrane	8.06E-03
27	GO:0005667: transcription factor complex	9.44E-03
28	GO:0009707: chloroplast outer membrane	1.05E-02
29	GO:0000151: ubiquitin ligase complex	1.05E-02
30	GO:0000325: plant-type vacuole	1.17E-02
31	GO:0031902: late endosome membrane	1.40E-02
32	GO:0000139: Golgi membrane	1.42E-02
33	GO:0005856: cytoskeleton	1.62E-02
34	GO:0005635: nuclear envelope	1.93E-02
35	GO:0005654: nucleoplasm	2.72E-02
36	GO:0005768: endosome	3.97E-02
37	GO:0005774: vacuolar membrane	4.58E-02