GO Enrichment Analysis of Co-expressed Genes with
AT4G31860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010360: negative regulation of anion channel activity | 0.00E+00 |
| 2 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 3 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 4 | GO:0000722: telomere maintenance via recombination | 0.00E+00 |
| 5 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 6 | GO:0006493: protein O-linked glycosylation | 0.00E+00 |
| 7 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 8 | GO:1901017: negative regulation of potassium ion transmembrane transporter activity | 0.00E+00 |
| 9 | GO:1902361: mitochondrial pyruvate transmembrane transport | 8.61E-05 |
| 10 | GO:0034214: protein hexamerization | 8.61E-05 |
| 11 | GO:0048508: embryonic meristem development | 8.61E-05 |
| 12 | GO:0006805: xenobiotic metabolic process | 8.61E-05 |
| 13 | GO:0070192: chromosome organization involved in meiotic cell cycle | 8.61E-05 |
| 14 | GO:0042742: defense response to bacterium | 1.41E-04 |
| 15 | GO:0009945: radial axis specification | 2.04E-04 |
| 16 | GO:0006850: mitochondrial pyruvate transport | 2.04E-04 |
| 17 | GO:0019752: carboxylic acid metabolic process | 2.04E-04 |
| 18 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 2.04E-04 |
| 19 | GO:0031648: protein destabilization | 2.04E-04 |
| 20 | GO:0006421: asparaginyl-tRNA aminoacylation | 3.42E-04 |
| 21 | GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening | 3.42E-04 |
| 22 | GO:0010359: regulation of anion channel activity | 3.42E-04 |
| 23 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 3.42E-04 |
| 24 | GO:0080055: low-affinity nitrate transport | 3.42E-04 |
| 25 | GO:0010288: response to lead ion | 3.42E-04 |
| 26 | GO:0051176: positive regulation of sulfur metabolic process | 3.42E-04 |
| 27 | GO:0009410: response to xenobiotic stimulus | 3.42E-04 |
| 28 | GO:0016233: telomere capping | 3.42E-04 |
| 29 | GO:0001676: long-chain fatty acid metabolic process | 4.92E-04 |
| 30 | GO:0007004: telomere maintenance via telomerase | 4.92E-04 |
| 31 | GO:0009165: nucleotide biosynthetic process | 6.55E-04 |
| 32 | GO:0045727: positive regulation of translation | 6.55E-04 |
| 33 | GO:0016579: protein deubiquitination | 8.66E-04 |
| 34 | GO:0006470: protein dephosphorylation | 9.66E-04 |
| 35 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.01E-03 |
| 36 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 1.01E-03 |
| 37 | GO:1902456: regulation of stomatal opening | 1.01E-03 |
| 38 | GO:1900425: negative regulation of defense response to bacterium | 1.01E-03 |
| 39 | GO:0010405: arabinogalactan protein metabolic process | 1.01E-03 |
| 40 | GO:0006751: glutathione catabolic process | 1.01E-03 |
| 41 | GO:0070814: hydrogen sulfide biosynthetic process | 1.01E-03 |
| 42 | GO:0009942: longitudinal axis specification | 1.20E-03 |
| 43 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.20E-03 |
| 44 | GO:0050790: regulation of catalytic activity | 1.41E-03 |
| 45 | GO:1900056: negative regulation of leaf senescence | 1.41E-03 |
| 46 | GO:0046686: response to cadmium ion | 1.61E-03 |
| 47 | GO:0032508: DNA duplex unwinding | 1.63E-03 |
| 48 | GO:2000070: regulation of response to water deprivation | 1.63E-03 |
| 49 | GO:0009819: drought recovery | 1.63E-03 |
| 50 | GO:0009651: response to salt stress | 1.71E-03 |
| 51 | GO:0009821: alkaloid biosynthetic process | 2.10E-03 |
| 52 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.10E-03 |
| 53 | GO:0090333: regulation of stomatal closure | 2.10E-03 |
| 54 | GO:0046685: response to arsenic-containing substance | 2.10E-03 |
| 55 | GO:0000723: telomere maintenance | 2.35E-03 |
| 56 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 2.35E-03 |
| 57 | GO:0019538: protein metabolic process | 2.61E-03 |
| 58 | GO:0000103: sulfate assimilation | 2.61E-03 |
| 59 | GO:0072593: reactive oxygen species metabolic process | 2.87E-03 |
| 60 | GO:0015706: nitrate transport | 3.15E-03 |
| 61 | GO:0006312: mitotic recombination | 3.15E-03 |
| 62 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 3.43E-03 |
| 63 | GO:0007034: vacuolar transport | 3.73E-03 |
| 64 | GO:0006302: double-strand break repair | 3.73E-03 |
| 65 | GO:0009116: nucleoside metabolic process | 4.65E-03 |
| 66 | GO:0009863: salicylic acid mediated signaling pathway | 4.65E-03 |
| 67 | GO:0015031: protein transport | 4.94E-03 |
| 68 | GO:0009409: response to cold | 5.44E-03 |
| 69 | GO:0009814: defense response, incompatible interaction | 5.66E-03 |
| 70 | GO:0016226: iron-sulfur cluster assembly | 5.66E-03 |
| 71 | GO:0007131: reciprocal meiotic recombination | 5.66E-03 |
| 72 | GO:0031348: negative regulation of defense response | 5.66E-03 |
| 73 | GO:0080092: regulation of pollen tube growth | 5.66E-03 |
| 74 | GO:0009625: response to insect | 6.01E-03 |
| 75 | GO:0010150: leaf senescence | 6.18E-03 |
| 76 | GO:0010091: trichome branching | 6.36E-03 |
| 77 | GO:0010501: RNA secondary structure unwinding | 7.10E-03 |
| 78 | GO:0042631: cellular response to water deprivation | 7.10E-03 |
| 79 | GO:0006520: cellular amino acid metabolic process | 7.48E-03 |
| 80 | GO:0045489: pectin biosynthetic process | 7.48E-03 |
| 81 | GO:0009646: response to absence of light | 7.87E-03 |
| 82 | GO:0006623: protein targeting to vacuole | 8.26E-03 |
| 83 | GO:0010183: pollen tube guidance | 8.26E-03 |
| 84 | GO:0002229: defense response to oomycetes | 8.66E-03 |
| 85 | GO:0010193: response to ozone | 8.66E-03 |
| 86 | GO:0000302: response to reactive oxygen species | 8.66E-03 |
| 87 | GO:0006468: protein phosphorylation | 8.83E-03 |
| 88 | GO:0006464: cellular protein modification process | 9.91E-03 |
| 89 | GO:0009860: pollen tube growth | 1.03E-02 |
| 90 | GO:0051607: defense response to virus | 1.08E-02 |
| 91 | GO:0009737: response to abscisic acid | 1.08E-02 |
| 92 | GO:0009723: response to ethylene | 1.11E-02 |
| 93 | GO:0001666: response to hypoxia | 1.12E-02 |
| 94 | GO:0009615: response to virus | 1.12E-02 |
| 95 | GO:0042128: nitrate assimilation | 1.21E-02 |
| 96 | GO:0046777: protein autophosphorylation | 1.27E-02 |
| 97 | GO:0045454: cell redox homeostasis | 1.42E-02 |
| 98 | GO:0009407: toxin catabolic process | 1.45E-02 |
| 99 | GO:0009414: response to water deprivation | 1.48E-02 |
| 100 | GO:0010119: regulation of stomatal movement | 1.50E-02 |
| 101 | GO:0010043: response to zinc ion | 1.50E-02 |
| 102 | GO:0000724: double-strand break repair via homologous recombination | 1.55E-02 |
| 103 | GO:0006631: fatty acid metabolic process | 1.81E-02 |
| 104 | GO:0000209: protein polyubiquitination | 1.97E-02 |
| 105 | GO:0009636: response to toxic substance | 2.08E-02 |
| 106 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.19E-02 |
| 107 | GO:0009846: pollen germination | 2.25E-02 |
| 108 | GO:0006486: protein glycosylation | 2.37E-02 |
| 109 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.43E-02 |
| 110 | GO:0006857: oligopeptide transport | 2.49E-02 |
| 111 | GO:0006417: regulation of translation | 2.55E-02 |
| 112 | GO:0009620: response to fungus | 2.85E-02 |
| 113 | GO:0009553: embryo sac development | 2.98E-02 |
| 114 | GO:0009738: abscisic acid-activated signaling pathway | 3.02E-02 |
| 115 | GO:0018105: peptidyl-serine phosphorylation | 3.11E-02 |
| 116 | GO:0009416: response to light stimulus | 3.12E-02 |
| 117 | GO:0035556: intracellular signal transduction | 3.29E-02 |
| 118 | GO:0000398: mRNA splicing, via spliceosome | 3.37E-02 |
| 119 | GO:0009058: biosynthetic process | 3.71E-02 |
| 120 | GO:0042744: hydrogen peroxide catabolic process | 3.92E-02 |
| 121 | GO:0009790: embryo development | 3.99E-02 |
| 122 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.23E-02 |
| 123 | GO:0009451: RNA modification | 4.56E-02 |
| 124 | GO:0016310: phosphorylation | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 2 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 3 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 4 | GO:0051880: G-quadruplex DNA binding | 0.00E+00 |
| 5 | GO:0070008: serine-type exopeptidase activity | 8.61E-05 |
| 6 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 8.61E-05 |
| 7 | GO:0005524: ATP binding | 1.73E-04 |
| 8 | GO:0032791: lead ion binding | 2.04E-04 |
| 9 | GO:0008408: 3'-5' exonuclease activity | 3.20E-04 |
| 10 | GO:0050833: pyruvate transmembrane transporter activity | 3.42E-04 |
| 11 | GO:0003840: gamma-glutamyltransferase activity | 3.42E-04 |
| 12 | GO:0036374: glutathione hydrolase activity | 3.42E-04 |
| 13 | GO:0004816: asparagine-tRNA ligase activity | 3.42E-04 |
| 14 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 3.42E-04 |
| 15 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 3.42E-04 |
| 16 | GO:0043047: single-stranded telomeric DNA binding | 4.92E-04 |
| 17 | GO:0000014: single-stranded DNA endodeoxyribonuclease activity | 4.92E-04 |
| 18 | GO:0031176: endo-1,4-beta-xylanase activity | 4.92E-04 |
| 19 | GO:0004749: ribose phosphate diphosphokinase activity | 4.92E-04 |
| 20 | GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity | 4.92E-04 |
| 21 | GO:0004416: hydroxyacylglutathione hydrolase activity | 4.92E-04 |
| 22 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 6.42E-04 |
| 23 | GO:0000062: fatty-acyl-CoA binding | 6.55E-04 |
| 24 | GO:0004197: cysteine-type endopeptidase activity | 6.84E-04 |
| 25 | GO:0031386: protein tag | 8.29E-04 |
| 26 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 8.29E-04 |
| 27 | GO:0031593: polyubiquitin binding | 1.01E-03 |
| 28 | GO:0035252: UDP-xylosyltransferase activity | 1.01E-03 |
| 29 | GO:0030976: thiamine pyrophosphate binding | 1.01E-03 |
| 30 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.01E-03 |
| 31 | GO:0004017: adenylate kinase activity | 1.20E-03 |
| 32 | GO:0004602: glutathione peroxidase activity | 1.20E-03 |
| 33 | GO:0102391: decanoate--CoA ligase activity | 1.20E-03 |
| 34 | GO:0043295: glutathione binding | 1.41E-03 |
| 35 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.41E-03 |
| 36 | GO:0016831: carboxy-lyase activity | 1.41E-03 |
| 37 | GO:0016301: kinase activity | 2.04E-03 |
| 38 | GO:0004003: ATP-dependent DNA helicase activity | 2.10E-03 |
| 39 | GO:0016844: strictosidine synthase activity | 2.35E-03 |
| 40 | GO:0004722: protein serine/threonine phosphatase activity | 2.60E-03 |
| 41 | GO:0008047: enzyme activator activity | 2.61E-03 |
| 42 | GO:0004713: protein tyrosine kinase activity | 2.61E-03 |
| 43 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.87E-03 |
| 44 | GO:0001054: RNA polymerase I activity | 2.87E-03 |
| 45 | GO:0003691: double-stranded telomeric DNA binding | 2.87E-03 |
| 46 | GO:0008378: galactosyltransferase activity | 3.15E-03 |
| 47 | GO:0000175: 3'-5'-exoribonuclease activity | 3.43E-03 |
| 48 | GO:0004674: protein serine/threonine kinase activity | 3.66E-03 |
| 49 | GO:0004535: poly(A)-specific ribonuclease activity | 3.73E-03 |
| 50 | GO:0031624: ubiquitin conjugating enzyme binding | 3.73E-03 |
| 51 | GO:0004386: helicase activity | 3.91E-03 |
| 52 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 5.32E-03 |
| 53 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 5.32E-03 |
| 54 | GO:0004540: ribonuclease activity | 5.32E-03 |
| 55 | GO:0003727: single-stranded RNA binding | 6.36E-03 |
| 56 | GO:0047134: protein-disulfide reductase activity | 6.73E-03 |
| 57 | GO:0042802: identical protein binding | 7.85E-03 |
| 58 | GO:0004791: thioredoxin-disulfide reductase activity | 7.87E-03 |
| 59 | GO:0030246: carbohydrate binding | 9.07E-03 |
| 60 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.03E-02 |
| 61 | GO:0051213: dioxygenase activity | 1.12E-02 |
| 62 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.21E-02 |
| 63 | GO:0004004: ATP-dependent RNA helicase activity | 1.26E-02 |
| 64 | GO:0004683: calmodulin-dependent protein kinase activity | 1.26E-02 |
| 65 | GO:0008236: serine-type peptidase activity | 1.31E-02 |
| 66 | GO:0005509: calcium ion binding | 1.38E-02 |
| 67 | GO:0046872: metal ion binding | 1.45E-02 |
| 68 | GO:0050897: cobalt ion binding | 1.50E-02 |
| 69 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.60E-02 |
| 70 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.70E-02 |
| 71 | GO:0003924: GTPase activity | 1.76E-02 |
| 72 | GO:0004364: glutathione transferase activity | 1.86E-02 |
| 73 | GO:0015293: symporter activity | 2.08E-02 |
| 74 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.37E-02 |
| 75 | GO:0008234: cysteine-type peptidase activity | 2.55E-02 |
| 76 | GO:0016887: ATPase activity | 2.73E-02 |
| 77 | GO:0005515: protein binding | 2.75E-02 |
| 78 | GO:0015035: protein disulfide oxidoreductase activity | 3.11E-02 |
| 79 | GO:0008026: ATP-dependent helicase activity | 3.17E-02 |
| 80 | GO:0016758: transferase activity, transferring hexosyl groups | 3.50E-02 |
| 81 | GO:0030170: pyridoxal phosphate binding | 3.85E-02 |
| 82 | GO:0004252: serine-type endopeptidase activity | 3.85E-02 |
| 83 | GO:0016787: hydrolase activity | 3.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035861: site of double-strand break | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0030139: endocytic vesicle | 1.53E-06 |
| 4 | GO:0030014: CCR4-NOT complex | 8.61E-05 |
| 5 | GO:0005829: cytosol | 9.84E-05 |
| 6 | GO:0030870: Mre11 complex | 2.04E-04 |
| 7 | GO:0032585: multivesicular body membrane | 4.92E-04 |
| 8 | GO:0016272: prefoldin complex | 1.20E-03 |
| 9 | GO:0000794: condensed nuclear chromosome | 1.41E-03 |
| 10 | GO:0031305: integral component of mitochondrial inner membrane | 1.63E-03 |
| 11 | GO:0000784: nuclear chromosome, telomeric region | 1.86E-03 |
| 12 | GO:0009514: glyoxysome | 1.86E-03 |
| 13 | GO:0031901: early endosome membrane | 2.10E-03 |
| 14 | GO:0005736: DNA-directed RNA polymerase I complex | 2.10E-03 |
| 15 | GO:0017119: Golgi transport complex | 2.61E-03 |
| 16 | GO:0005635: nuclear envelope | 2.71E-03 |
| 17 | GO:0005768: endosome | 2.93E-03 |
| 18 | GO:0005764: lysosome | 3.73E-03 |
| 19 | GO:0005773: vacuole | 4.24E-03 |
| 20 | GO:0043234: protein complex | 4.34E-03 |
| 21 | GO:0005769: early endosome | 4.34E-03 |
| 22 | GO:0000790: nuclear chromatin | 6.73E-03 |
| 23 | GO:0005778: peroxisomal membrane | 1.03E-02 |
| 24 | GO:0005886: plasma membrane | 1.06E-02 |
| 25 | GO:0000151: ubiquitin ligase complex | 1.35E-02 |
| 26 | GO:0005737: cytoplasm | 1.52E-02 |
| 27 | GO:0005819: spindle | 1.70E-02 |
| 28 | GO:0031902: late endosome membrane | 1.81E-02 |
| 29 | GO:0005783: endoplasmic reticulum | 2.19E-02 |
| 30 | GO:0000139: Golgi membrane | 2.23E-02 |
| 31 | GO:0048046: apoplast | 2.40E-02 |
| 32 | GO:0005834: heterotrimeric G-protein complex | 2.79E-02 |
| 33 | GO:0005654: nucleoplasm | 3.50E-02 |
| 34 | GO:0005777: peroxisome | 3.58E-02 |
| 35 | GO:0009524: phragmoplast | 3.71E-02 |
| 36 | GO:0005615: extracellular space | 4.86E-02 |
| 37 | GO:0005802: trans-Golgi network | 4.97E-02 |