GO Enrichment Analysis of Co-expressed Genes with
AT4G31810
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 2 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:2000232: regulation of rRNA processing | 1.77E-05 |
| 4 | GO:0034976: response to endoplasmic reticulum stress | 2.42E-05 |
| 5 | GO:0000027: ribosomal large subunit assembly | 2.75E-05 |
| 6 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.61E-05 |
| 7 | GO:1902626: assembly of large subunit precursor of preribosome | 8.18E-05 |
| 8 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.23E-04 |
| 9 | GO:0000956: nuclear-transcribed mRNA catabolic process | 1.69E-04 |
| 10 | GO:0031365: N-terminal protein amino acid modification | 2.19E-04 |
| 11 | GO:0016554: cytidine to uridine editing | 2.72E-04 |
| 12 | GO:0046686: response to cadmium ion | 2.94E-04 |
| 13 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 3.27E-04 |
| 14 | GO:0006364: rRNA processing | 3.61E-04 |
| 15 | GO:0006189: 'de novo' IMP biosynthetic process | 5.68E-04 |
| 16 | GO:0006457: protein folding | 6.66E-04 |
| 17 | GO:0016485: protein processing | 7.68E-04 |
| 18 | GO:0010075: regulation of meristem growth | 9.08E-04 |
| 19 | GO:0009934: regulation of meristem structural organization | 9.82E-04 |
| 20 | GO:0048467: gynoecium development | 9.82E-04 |
| 21 | GO:0046688: response to copper ion | 1.06E-03 |
| 22 | GO:0006825: copper ion transport | 1.29E-03 |
| 23 | GO:0006334: nucleosome assembly | 1.37E-03 |
| 24 | GO:0007005: mitochondrion organization | 1.46E-03 |
| 25 | GO:0009306: protein secretion | 1.63E-03 |
| 26 | GO:0048868: pollen tube development | 1.90E-03 |
| 27 | GO:0080156: mitochondrial mRNA modification | 2.19E-03 |
| 28 | GO:0009567: double fertilization forming a zygote and endosperm | 2.49E-03 |
| 29 | GO:0006839: mitochondrial transport | 4.31E-03 |
| 30 | GO:0006414: translational elongation | 6.12E-03 |
| 31 | GO:0009553: embryo sac development | 7.19E-03 |
| 32 | GO:0000398: mRNA splicing, via spliceosome | 8.10E-03 |
| 33 | GO:0009414: response to water deprivation | 8.10E-03 |
| 34 | GO:0009451: RNA modification | 1.09E-02 |
| 35 | GO:0009617: response to bacterium | 1.22E-02 |
| 36 | GO:0042254: ribosome biogenesis | 1.48E-02 |
| 37 | GO:0016192: vesicle-mediated transport | 1.77E-02 |
| 38 | GO:0044550: secondary metabolite biosynthetic process | 1.81E-02 |
| 39 | GO:0045454: cell redox homeostasis | 1.94E-02 |
| 40 | GO:0006886: intracellular protein transport | 1.98E-02 |
| 41 | GO:0006508: proteolysis | 2.56E-02 |
| 42 | GO:0009651: response to salt stress | 2.80E-02 |
| 43 | GO:0009734: auxin-activated signaling pathway | 2.87E-02 |
| 44 | GO:0009555: pollen development | 3.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003746: translation elongation factor activity | 4.93E-08 |
| 2 | GO:0042134: rRNA primary transcript binding | 1.77E-05 |
| 3 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 1.77E-05 |
| 4 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 4.61E-05 |
| 5 | GO:0016531: copper chaperone activity | 8.18E-05 |
| 6 | GO:0050897: cobalt ion binding | 1.87E-04 |
| 7 | GO:0008320: protein transmembrane transporter activity | 3.84E-04 |
| 8 | GO:0008235: metalloexopeptidase activity | 3.84E-04 |
| 9 | GO:0030515: snoRNA binding | 3.84E-04 |
| 10 | GO:0008135: translation factor activity, RNA binding | 5.05E-04 |
| 11 | GO:0051082: unfolded protein binding | 5.10E-04 |
| 12 | GO:0001055: RNA polymerase II activity | 6.32E-04 |
| 13 | GO:0001054: RNA polymerase I activity | 7.68E-04 |
| 14 | GO:0004177: aminopeptidase activity | 7.68E-04 |
| 15 | GO:0001056: RNA polymerase III activity | 8.38E-04 |
| 16 | GO:0005525: GTP binding | 8.97E-04 |
| 17 | GO:0015114: phosphate ion transmembrane transporter activity | 9.08E-04 |
| 18 | GO:0005528: FK506 binding | 1.21E-03 |
| 19 | GO:0004176: ATP-dependent peptidase activity | 1.37E-03 |
| 20 | GO:0003756: protein disulfide isomerase activity | 1.63E-03 |
| 21 | GO:0003713: transcription coactivator activity | 1.90E-03 |
| 22 | GO:0016853: isomerase activity | 2.00E-03 |
| 23 | GO:0008236: serine-type peptidase activity | 3.24E-03 |
| 24 | GO:0003723: RNA binding | 3.39E-03 |
| 25 | GO:0004222: metalloendopeptidase activity | 3.59E-03 |
| 26 | GO:0042393: histone binding | 4.31E-03 |
| 27 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.21E-03 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.75E-03 |
| 29 | GO:0004252: serine-type endopeptidase activity | 9.23E-03 |
| 30 | GO:0005524: ATP binding | 1.51E-02 |
| 31 | GO:0008233: peptidase activity | 1.68E-02 |
| 32 | GO:0004497: monooxygenase activity | 1.70E-02 |
| 33 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.05E-02 |
| 34 | GO:0003924: GTPase activity | 2.25E-02 |
| 35 | GO:0016887: ATPase activity | 3.07E-02 |
| 36 | GO:0019825: oxygen binding | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 2.03E-06 |
| 3 | GO:0005783: endoplasmic reticulum | 1.04E-05 |
| 4 | GO:0070545: PeBoW complex | 4.61E-05 |
| 5 | GO:0030134: ER to Golgi transport vesicle | 4.61E-05 |
| 6 | GO:1990726: Lsm1-7-Pat1 complex | 1.23E-04 |
| 7 | GO:0005788: endoplasmic reticulum lumen | 1.28E-04 |
| 8 | GO:0016363: nuclear matrix | 3.27E-04 |
| 9 | GO:0005801: cis-Golgi network | 3.27E-04 |
| 10 | GO:0005688: U6 snRNP | 4.43E-04 |
| 11 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 5.05E-04 |
| 12 | GO:0005732: small nucleolar ribonucleoprotein complex | 5.54E-04 |
| 13 | GO:0005736: DNA-directed RNA polymerase I complex | 5.68E-04 |
| 14 | GO:0005666: DNA-directed RNA polymerase III complex | 6.32E-04 |
| 15 | GO:0015030: Cajal body | 6.32E-04 |
| 16 | GO:0000418: DNA-directed RNA polymerase IV complex | 6.99E-04 |
| 17 | GO:0032040: small-subunit processome | 8.38E-04 |
| 18 | GO:0005665: DNA-directed RNA polymerase II, core complex | 8.38E-04 |
| 19 | GO:0031012: extracellular matrix | 9.08E-04 |
| 20 | GO:0019013: viral nucleocapsid | 9.08E-04 |
| 21 | GO:0005758: mitochondrial intermembrane space | 1.21E-03 |
| 22 | GO:0005739: mitochondrion | 3.84E-03 |
| 23 | GO:0005774: vacuolar membrane | 5.51E-03 |
| 24 | GO:0005681: spliceosomal complex | 6.45E-03 |
| 25 | GO:0005654: nucleoplasm | 8.42E-03 |
| 26 | GO:0005759: mitochondrial matrix | 1.01E-02 |
| 27 | GO:0022625: cytosolic large ribosomal subunit | 1.77E-02 |
| 28 | GO:0016020: membrane | 2.02E-02 |
| 29 | GO:0005743: mitochondrial inner membrane | 2.14E-02 |
| 30 | GO:0005829: cytosol | 2.38E-02 |
| 31 | GO:0005886: plasma membrane | 2.65E-02 |
| 32 | GO:0005618: cell wall | 3.31E-02 |
| 33 | GO:0009507: chloroplast | 4.12E-02 |
| 34 | GO:0005773: vacuole | 4.42E-02 |
| 35 | GO:0031225: anchored component of membrane | 4.65E-02 |