Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G31170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043269: regulation of ion transport0.00E+00
2GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
3GO:0045747: positive regulation of Notch signaling pathway0.00E+00
4GO:0043419: urea catabolic process0.00E+00
5GO:0002221: pattern recognition receptor signaling pathway1.54E-07
6GO:2000072: regulation of defense response to fungus, incompatible interaction1.54E-07
7GO:0080142: regulation of salicylic acid biosynthetic process2.78E-06
8GO:0043069: negative regulation of programmed cell death4.63E-05
9GO:0009968: negative regulation of signal transduction5.03E-05
10GO:0043547: positive regulation of GTPase activity5.03E-05
11GO:0051245: negative regulation of cellular defense response5.03E-05
12GO:0000266: mitochondrial fission6.46E-05
13GO:0006886: intracellular protein transport1.15E-04
14GO:0010541: acropetal auxin transport1.23E-04
15GO:0015012: heparan sulfate proteoglycan biosynthetic process1.23E-04
16GO:0006996: organelle organization1.23E-04
17GO:0015914: phospholipid transport1.23E-04
18GO:0006024: glycosaminoglycan biosynthetic process1.23E-04
19GO:0030010: establishment of cell polarity1.23E-04
20GO:2000034: regulation of seed maturation2.11E-04
21GO:0006421: asparaginyl-tRNA aminoacylation2.11E-04
22GO:0006612: protein targeting to membrane3.09E-04
23GO:0007166: cell surface receptor signaling pathway3.99E-04
24GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA4.15E-04
25GO:0010363: regulation of plant-type hypersensitive response4.15E-04
26GO:0006221: pyrimidine nucleotide biosynthetic process4.15E-04
27GO:0045116: protein neddylation5.26E-04
28GO:0006354: DNA-templated transcription, elongation6.44E-04
29GO:0048527: lateral root development6.92E-04
30GO:0009867: jasmonic acid mediated signaling pathway7.56E-04
31GO:0045087: innate immune response7.56E-04
32GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response7.68E-04
33GO:0046470: phosphatidylcholine metabolic process8.97E-04
34GO:0016559: peroxisome fission1.03E-03
35GO:0042742: defense response to bacterium1.16E-03
36GO:0009880: embryonic pattern specification1.17E-03
37GO:0006379: mRNA cleavage1.32E-03
38GO:0042761: very long-chain fatty acid biosynthetic process1.47E-03
39GO:0006896: Golgi to vacuole transport1.63E-03
40GO:0030148: sphingolipid biosynthetic process1.79E-03
41GO:0009734: auxin-activated signaling pathway1.89E-03
42GO:0071365: cellular response to auxin stimulus1.96E-03
43GO:0006807: nitrogen compound metabolic process2.14E-03
44GO:0010030: positive regulation of seed germination2.50E-03
45GO:0007031: peroxisome organization2.50E-03
46GO:0000027: ribosomal large subunit assembly2.88E-03
47GO:0009863: salicylic acid mediated signaling pathway2.88E-03
48GO:0010187: negative regulation of seed germination2.88E-03
49GO:0061077: chaperone-mediated protein folding3.29E-03
50GO:0048278: vesicle docking3.29E-03
51GO:0007131: reciprocal meiotic recombination3.50E-03
52GO:0042127: regulation of cell proliferation3.93E-03
53GO:0010182: sugar mediated signaling pathway4.60E-03
54GO:0061025: membrane fusion4.83E-03
55GO:0009749: response to glucose5.07E-03
56GO:0009791: post-embryonic development5.07E-03
57GO:0007049: cell cycle5.27E-03
58GO:0002229: defense response to oomycetes5.32E-03
59GO:0030163: protein catabolic process5.81E-03
60GO:0010252: auxin homeostasis6.07E-03
61GO:0016192: vesicle-mediated transport6.15E-03
62GO:0006906: vesicle fusion7.40E-03
63GO:0006468: protein phosphorylation7.56E-03
64GO:0016049: cell growth7.96E-03
65GO:0008219: cell death8.24E-03
66GO:0009817: defense response to fungus, incompatible interaction8.24E-03
67GO:0006887: exocytosis1.10E-02
68GO:0009965: leaf morphogenesis1.26E-02
69GO:0009735: response to cytokinin1.40E-02
70GO:0009736: cytokinin-activated signaling pathway1.44E-02
71GO:0006486: protein glycosylation1.44E-02
72GO:0009738: abscisic acid-activated signaling pathway1.49E-02
73GO:0006417: regulation of translation1.54E-02
74GO:0009626: plant-type hypersensitive response1.69E-02
75GO:0009553: embryo sac development1.80E-02
76GO:0018105: peptidyl-serine phosphorylation1.88E-02
77GO:0009742: brassinosteroid mediated signaling pathway1.92E-02
78GO:0000398: mRNA splicing, via spliceosome2.04E-02
79GO:0006511: ubiquitin-dependent protein catabolic process2.09E-02
80GO:0009845: seed germination2.29E-02
81GO:0009790: embryo development2.41E-02
82GO:0050832: defense response to fungus2.45E-02
83GO:0006413: translational initiation2.59E-02
84GO:0006470: protein dephosphorylation2.99E-02
85GO:0009414: response to water deprivation3.04E-02
86GO:0008380: RNA splicing3.08E-02
87GO:0009617: response to bacterium3.08E-02
88GO:0030154: cell differentiation3.39E-02
89GO:0009826: unidimensional cell growth3.61E-02
90GO:0006970: response to osmotic stress3.91E-02
91GO:0015031: protein transport3.95E-02
92GO:0046777: protein autophosphorylation4.54E-02
93GO:0044550: secondary metabolite biosynthetic process4.59E-02
RankGO TermAdjusted P value
1GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
2GO:0009039: urease activity0.00E+00
3GO:0019781: NEDD8 activating enzyme activity1.23E-04
4GO:0045140: inositol phosphoceramide synthase activity1.23E-04
5GO:0004816: asparagine-tRNA ligase activity2.11E-04
6GO:0016151: nickel cation binding2.11E-04
7GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.06E-04
8GO:0000166: nucleotide binding4.01E-04
9GO:0004930: G-protein coupled receptor activity4.15E-04
10GO:0005515: protein binding4.63E-04
11GO:0008641: small protein activating enzyme activity5.26E-04
12GO:0004040: amidase activity5.26E-04
13GO:0008320: protein transmembrane transporter activity8.97E-04
14GO:0004714: transmembrane receptor protein tyrosine kinase activity1.03E-03
15GO:0004630: phospholipase D activity1.17E-03
16GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.17E-03
17GO:0004713: protein tyrosine kinase activity1.63E-03
18GO:0003712: transcription cofactor activity2.50E-03
19GO:0005528: FK506 binding2.88E-03
20GO:0008017: microtubule binding3.21E-03
21GO:0033612: receptor serine/threonine kinase binding3.29E-03
22GO:0004527: exonuclease activity4.60E-03
23GO:0001085: RNA polymerase II transcription factor binding4.60E-03
24GO:0005525: GTP binding4.75E-03
25GO:0010181: FMN binding4.83E-03
26GO:0005509: calcium ion binding5.58E-03
27GO:0009931: calcium-dependent protein serine/threonine kinase activity7.40E-03
28GO:0004683: calmodulin-dependent protein kinase activity7.68E-03
29GO:0005096: GTPase activator activity8.53E-03
30GO:0003924: GTPase activity8.64E-03
31GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding9.12E-03
32GO:0003746: translation elongation factor activity9.73E-03
33GO:0016301: kinase activity9.74E-03
34GO:0000149: SNARE binding1.03E-02
35GO:0004712: protein serine/threonine/tyrosine kinase activity1.03E-02
36GO:0005484: SNAP receptor activity1.16E-02
37GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.30E-02
38GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.44E-02
39GO:0022857: transmembrane transporter activity1.77E-02
40GO:0016746: transferase activity, transferring acyl groups1.88E-02
41GO:0016740: transferase activity1.88E-02
42GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.37E-02
43GO:0003723: RNA binding2.58E-02
44GO:0003743: translation initiation factor activity3.04E-02
45GO:0046982: protein heterodimerization activity3.66E-02
46GO:0003682: chromatin binding3.86E-02
47GO:0016491: oxidoreductase activity4.09E-02
48GO:0004672: protein kinase activity4.56E-02
49GO:0003729: mRNA binding4.62E-02
RankGO TermAdjusted P value
1GO:0005901: caveola1.23E-04
2GO:0005886: plasma membrane1.70E-04
3GO:0030130: clathrin coat of trans-Golgi network vesicle2.11E-04
4GO:0030132: clathrin coat of coated pit2.11E-04
5GO:0030658: transport vesicle membrane3.09E-04
6GO:0005789: endoplasmic reticulum membrane4.43E-04
7GO:0019005: SCF ubiquitin ligase complex6.02E-04
8GO:0031902: late endosome membrane8.91E-04
9GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane8.97E-04
10GO:0030131: clathrin adaptor complex1.03E-03
11GO:0030665: clathrin-coated vesicle membrane1.47E-03
12GO:0010008: endosome membrane1.55E-03
13GO:0030125: clathrin vesicle coat1.63E-03
14GO:0043234: protein complex2.69E-03
15GO:0005829: cytosol2.90E-03
16GO:0030136: clathrin-coated vesicle4.15E-03
17GO:0080008: Cul4-RING E3 ubiquitin ligase complex5.18E-03
18GO:0032580: Golgi cisterna membrane6.07E-03
19GO:0000932: P-body6.85E-03
20GO:0005667: transcription factor complex7.40E-03
21GO:0009707: chloroplast outer membrane8.24E-03
22GO:0000139: Golgi membrane9.08E-03
23GO:0000325: plant-type vacuole9.12E-03
24GO:0031201: SNARE complex1.10E-02
25GO:0005794: Golgi apparatus1.10E-02
26GO:0005681: spliceosomal complex1.62E-02
27GO:0016607: nuclear speck1.65E-02
28GO:0005834: heterotrimeric G-protein complex1.69E-02
29GO:0012505: endomembrane system1.80E-02
30GO:0009524: phragmoplast2.24E-02
31GO:0005802: trans-Golgi network2.47E-02
32GO:0005737: cytoplasm2.48E-02
33GO:0005768: endosome2.81E-02
34GO:0016020: membrane3.62E-02
35GO:0005874: microtubule4.22E-02
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Gene type



Gene DE type