GO Enrichment Analysis of Co-expressed Genes with
AT4G29960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006793: phosphorus metabolic process | 0.00E+00 |
| 2 | GO:0006784: heme a biosynthetic process | 0.00E+00 |
| 3 | GO:0030026: cellular manganese ion homeostasis | 6.30E-06 |
| 4 | GO:0009617: response to bacterium | 8.26E-06 |
| 5 | GO:0030091: protein repair | 8.44E-06 |
| 6 | GO:0010120: camalexin biosynthetic process | 1.10E-05 |
| 7 | GO:0009700: indole phytoalexin biosynthetic process | 3.00E-05 |
| 8 | GO:0006874: cellular calcium ion homeostasis | 6.68E-05 |
| 9 | GO:0051592: response to calcium ion | 7.58E-05 |
| 10 | GO:0010351: lithium ion transport | 1.32E-04 |
| 11 | GO:0010498: proteasomal protein catabolic process | 1.32E-04 |
| 12 | GO:0034051: negative regulation of plant-type hypersensitive response | 1.32E-04 |
| 13 | GO:0006882: cellular zinc ion homeostasis | 1.97E-04 |
| 14 | GO:0010387: COP9 signalosome assembly | 2.67E-04 |
| 15 | GO:0045088: regulation of innate immune response | 2.67E-04 |
| 16 | GO:0006621: protein retention in ER lumen | 2.67E-04 |
| 17 | GO:0006461: protein complex assembly | 3.42E-04 |
| 18 | GO:0000304: response to singlet oxygen | 3.42E-04 |
| 19 | GO:0002238: response to molecule of fungal origin | 4.20E-04 |
| 20 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.20E-04 |
| 21 | GO:0010256: endomembrane system organization | 4.20E-04 |
| 22 | GO:0006880: intracellular sequestering of iron ion | 5.88E-04 |
| 23 | GO:0000338: protein deneddylation | 5.88E-04 |
| 24 | GO:0050829: defense response to Gram-negative bacterium | 5.88E-04 |
| 25 | GO:0043068: positive regulation of programmed cell death | 6.76E-04 |
| 26 | GO:0010112: regulation of systemic acquired resistance | 8.63E-04 |
| 27 | GO:0051865: protein autoubiquitination | 8.63E-04 |
| 28 | GO:0055062: phosphate ion homeostasis | 1.06E-03 |
| 29 | GO:0009682: induced systemic resistance | 1.16E-03 |
| 30 | GO:0015770: sucrose transport | 1.16E-03 |
| 31 | GO:0012501: programmed cell death | 1.27E-03 |
| 32 | GO:0034605: cellular response to heat | 1.50E-03 |
| 33 | GO:0010073: meristem maintenance | 1.98E-03 |
| 34 | GO:0003333: amino acid transmembrane transport | 2.11E-03 |
| 35 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.25E-03 |
| 36 | GO:0035428: hexose transmembrane transport | 2.25E-03 |
| 37 | GO:0009625: response to insect | 2.38E-03 |
| 38 | GO:0055114: oxidation-reduction process | 2.58E-03 |
| 39 | GO:0046323: glucose import | 2.94E-03 |
| 40 | GO:0006814: sodium ion transport | 3.09E-03 |
| 41 | GO:0010200: response to chitin | 3.15E-03 |
| 42 | GO:0010193: response to ozone | 3.40E-03 |
| 43 | GO:0071281: cellular response to iron ion | 3.71E-03 |
| 44 | GO:0051607: defense response to virus | 4.20E-03 |
| 45 | GO:0009751: response to salicylic acid | 4.41E-03 |
| 46 | GO:0009816: defense response to bacterium, incompatible interaction | 4.53E-03 |
| 47 | GO:0009753: response to jasmonic acid | 4.79E-03 |
| 48 | GO:0007568: aging | 5.78E-03 |
| 49 | GO:0048527: lateral root development | 5.78E-03 |
| 50 | GO:0006865: amino acid transport | 5.97E-03 |
| 51 | GO:0042542: response to hydrogen peroxide | 7.14E-03 |
| 52 | GO:0009640: photomorphogenesis | 7.34E-03 |
| 53 | GO:0008643: carbohydrate transport | 7.75E-03 |
| 54 | GO:0009416: response to light stimulus | 7.91E-03 |
| 55 | GO:0009636: response to toxic substance | 7.96E-03 |
| 56 | GO:0009611: response to wounding | 8.09E-03 |
| 57 | GO:0006855: drug transmembrane transport | 8.17E-03 |
| 58 | GO:0006812: cation transport | 8.60E-03 |
| 59 | GO:0009585: red, far-red light phototransduction | 9.03E-03 |
| 60 | GO:0010224: response to UV-B | 9.25E-03 |
| 61 | GO:0009553: embryo sac development | 1.13E-02 |
| 62 | GO:0009624: response to nematode | 1.16E-02 |
| 63 | GO:0042742: defense response to bacterium | 1.61E-02 |
| 64 | GO:0006979: response to oxidative stress | 1.62E-02 |
| 65 | GO:0016036: cellular response to phosphate starvation | 1.62E-02 |
| 66 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.85E-02 |
| 67 | GO:0006952: defense response | 2.33E-02 |
| 68 | GO:0009860: pollen tube growth | 2.45E-02 |
| 69 | GO:0016192: vesicle-mediated transport | 2.81E-02 |
| 70 | GO:0007165: signal transduction | 3.35E-02 |
| 71 | GO:0032259: methylation | 3.47E-02 |
| 72 | GO:0009408: response to heat | 3.58E-02 |
| 73 | GO:0050832: defense response to fungus | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005046: KDEL sequence binding | 0.00E+00 |
| 2 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 3 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 4 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 4.52E-06 |
| 5 | GO:0004103: choline kinase activity | 7.58E-05 |
| 6 | GO:0015368: calcium:cation antiporter activity | 2.67E-04 |
| 7 | GO:0015369: calcium:proton antiporter activity | 2.67E-04 |
| 8 | GO:0046923: ER retention sequence binding | 2.67E-04 |
| 9 | GO:0015145: monosaccharide transmembrane transporter activity | 3.42E-04 |
| 10 | GO:0004222: metalloendopeptidase activity | 3.49E-04 |
| 11 | GO:0036402: proteasome-activating ATPase activity | 4.20E-04 |
| 12 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 5.02E-04 |
| 13 | GO:0008506: sucrose:proton symporter activity | 5.88E-04 |
| 14 | GO:0015491: cation:cation antiporter activity | 6.76E-04 |
| 15 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 8.63E-04 |
| 16 | GO:0005381: iron ion transmembrane transporter activity | 9.61E-04 |
| 17 | GO:0005384: manganese ion transmembrane transporter activity | 9.61E-04 |
| 18 | GO:0004970: ionotropic glutamate receptor activity | 1.61E-03 |
| 19 | GO:0004867: serine-type endopeptidase inhibitor activity | 1.61E-03 |
| 20 | GO:0005217: intracellular ligand-gated ion channel activity | 1.61E-03 |
| 21 | GO:0017025: TBP-class protein binding | 1.61E-03 |
| 22 | GO:0022891: substrate-specific transmembrane transporter activity | 2.38E-03 |
| 23 | GO:0005355: glucose transmembrane transporter activity | 3.09E-03 |
| 24 | GO:0004872: receptor activity | 3.24E-03 |
| 25 | GO:0004871: signal transducer activity | 3.81E-03 |
| 26 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.92E-03 |
| 27 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.03E-03 |
| 28 | GO:0015238: drug transmembrane transporter activity | 5.41E-03 |
| 29 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 5.78E-03 |
| 30 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 6.35E-03 |
| 31 | GO:0015171: amino acid transmembrane transporter activity | 9.70E-03 |
| 32 | GO:0019825: oxygen binding | 1.13E-02 |
| 33 | GO:0005509: calcium ion binding | 1.48E-02 |
| 34 | GO:0015144: carbohydrate transmembrane transporter activity | 1.54E-02 |
| 35 | GO:0005506: iron ion binding | 1.58E-02 |
| 36 | GO:0044212: transcription regulatory region DNA binding | 1.61E-02 |
| 37 | GO:0015297: antiporter activity | 1.65E-02 |
| 38 | GO:0005351: sugar:proton symporter activity | 1.68E-02 |
| 39 | GO:0008168: methyltransferase activity | 2.26E-02 |
| 40 | GO:0020037: heme binding | 2.54E-02 |
| 41 | GO:0050660: flavin adenine dinucleotide binding | 2.58E-02 |
| 42 | GO:0004497: monooxygenase activity | 2.71E-02 |
| 43 | GO:0061630: ubiquitin protein ligase activity | 2.81E-02 |
| 44 | GO:0009055: electron carrier activity | 3.76E-02 |
| 45 | GO:0005515: protein binding | 3.98E-02 |
| 46 | GO:0016887: ATPase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016021: integral component of membrane | 4.46E-05 |
| 2 | GO:0016020: membrane | 2.92E-04 |
| 3 | GO:0010168: ER body | 4.20E-04 |
| 4 | GO:0031597: cytosolic proteasome complex | 5.02E-04 |
| 5 | GO:0005801: cis-Golgi network | 5.02E-04 |
| 6 | GO:0031595: nuclear proteasome complex | 5.88E-04 |
| 7 | GO:0008180: COP9 signalosome | 8.63E-04 |
| 8 | GO:0008540: proteasome regulatory particle, base subcomplex | 9.61E-04 |
| 9 | GO:0031012: extracellular matrix | 1.38E-03 |
| 10 | GO:0009705: plant-type vacuole membrane | 1.61E-03 |
| 11 | GO:0005788: endoplasmic reticulum lumen | 4.53E-03 |
| 12 | GO:0005789: endoplasmic reticulum membrane | 4.54E-03 |
| 13 | GO:0005783: endoplasmic reticulum | 7.97E-03 |
| 14 | GO:0000502: proteasome complex | 9.03E-03 |
| 15 | GO:0005834: heterotrimeric G-protein complex | 1.06E-02 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 1.36E-02 |
| 17 | GO:0005623: cell | 1.38E-02 |
| 18 | GO:0046658: anchored component of plasma membrane | 2.08E-02 |
| 19 | GO:0005794: Golgi apparatus | 3.26E-02 |
| 20 | GO:0005743: mitochondrial inner membrane | 3.40E-02 |
| 21 | GO:0043231: intracellular membrane-bounded organelle | 3.83E-02 |
| 22 | GO:0005887: integral component of plasma membrane | 4.44E-02 |