GO Enrichment Analysis of Co-expressed Genes with
AT4G29660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 2 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 3 | GO:0007141: male meiosis I | 0.00E+00 |
| 4 | GO:0048227: plasma membrane to endosome transport | 0.00E+00 |
| 5 | GO:0080180: 2-methylguanosine metabolic process | 0.00E+00 |
| 6 | GO:0016559: peroxisome fission | 2.41E-05 |
| 7 | GO:0006422: aspartyl-tRNA aminoacylation | 5.79E-05 |
| 8 | GO:2000025: regulation of leaf formation | 5.79E-05 |
| 9 | GO:0000266: mitochondrial fission | 7.94E-05 |
| 10 | GO:0015914: phospholipid transport | 1.41E-04 |
| 11 | GO:0007131: reciprocal meiotic recombination | 2.06E-04 |
| 12 | GO:0051176: positive regulation of sulfur metabolic process | 2.40E-04 |
| 13 | GO:0009410: response to xenobiotic stimulus | 2.40E-04 |
| 14 | GO:0090708: specification of plant organ axis polarity | 2.40E-04 |
| 15 | GO:0006421: asparaginyl-tRNA aminoacylation | 2.40E-04 |
| 16 | GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening | 2.40E-04 |
| 17 | GO:0010359: regulation of anion channel activity | 2.40E-04 |
| 18 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 2.40E-04 |
| 19 | GO:0001676: long-chain fatty acid metabolic process | 3.49E-04 |
| 20 | GO:0034613: cellular protein localization | 4.66E-04 |
| 21 | GO:0002098: tRNA wobble uridine modification | 4.66E-04 |
| 22 | GO:0045116: protein neddylation | 5.92E-04 |
| 23 | GO:0048232: male gamete generation | 7.24E-04 |
| 24 | GO:1902456: regulation of stomatal opening | 7.24E-04 |
| 25 | GO:1900425: negative regulation of defense response to bacterium | 7.24E-04 |
| 26 | GO:0006400: tRNA modification | 1.01E-03 |
| 27 | GO:0050790: regulation of catalytic activity | 1.01E-03 |
| 28 | GO:0006102: isocitrate metabolic process | 1.16E-03 |
| 29 | GO:0010928: regulation of auxin mediated signaling pathway | 1.16E-03 |
| 30 | GO:0035265: organ growth | 1.16E-03 |
| 31 | GO:0009819: drought recovery | 1.16E-03 |
| 32 | GO:0046685: response to arsenic-containing substance | 1.48E-03 |
| 33 | GO:0009821: alkaloid biosynthetic process | 1.48E-03 |
| 34 | GO:0090333: regulation of stomatal closure | 1.48E-03 |
| 35 | GO:0051026: chiasma assembly | 1.83E-03 |
| 36 | GO:0000103: sulfate assimilation | 1.83E-03 |
| 37 | GO:0030148: sphingolipid biosynthetic process | 2.02E-03 |
| 38 | GO:0015031: protein transport | 2.21E-03 |
| 39 | GO:0009863: salicylic acid mediated signaling pathway | 3.26E-03 |
| 40 | GO:0016575: histone deacetylation | 3.49E-03 |
| 41 | GO:0007005: mitochondrion organization | 3.95E-03 |
| 42 | GO:0009814: defense response, incompatible interaction | 3.95E-03 |
| 43 | GO:0016226: iron-sulfur cluster assembly | 3.95E-03 |
| 44 | GO:0009294: DNA mediated transformation | 4.20E-03 |
| 45 | GO:0006284: base-excision repair | 4.44E-03 |
| 46 | GO:0010501: RNA secondary structure unwinding | 4.95E-03 |
| 47 | GO:0006662: glycerol ether metabolic process | 5.21E-03 |
| 48 | GO:0006623: protein targeting to vacuole | 5.75E-03 |
| 49 | GO:0002229: defense response to oomycetes | 6.02E-03 |
| 50 | GO:0010193: response to ozone | 6.02E-03 |
| 51 | GO:0000302: response to reactive oxygen species | 6.02E-03 |
| 52 | GO:0007264: small GTPase mediated signal transduction | 6.31E-03 |
| 53 | GO:0006914: autophagy | 6.88E-03 |
| 54 | GO:0006310: DNA recombination | 6.88E-03 |
| 55 | GO:0010252: auxin homeostasis | 6.88E-03 |
| 56 | GO:0051607: defense response to virus | 7.47E-03 |
| 57 | GO:0046777: protein autophosphorylation | 7.50E-03 |
| 58 | GO:0009615: response to virus | 7.78E-03 |
| 59 | GO:0045454: cell redox homeostasis | 8.40E-03 |
| 60 | GO:0009651: response to salt stress | 9.62E-03 |
| 61 | GO:0006499: N-terminal protein myristoylation | 1.00E-02 |
| 62 | GO:0006281: DNA repair | 1.04E-02 |
| 63 | GO:0010119: regulation of stomatal movement | 1.04E-02 |
| 64 | GO:0008152: metabolic process | 1.14E-02 |
| 65 | GO:0006099: tricarboxylic acid cycle | 1.14E-02 |
| 66 | GO:0034599: cellular response to oxidative stress | 1.14E-02 |
| 67 | GO:0006631: fatty acid metabolic process | 1.25E-02 |
| 68 | GO:0008283: cell proliferation | 1.32E-02 |
| 69 | GO:0005975: carbohydrate metabolic process | 1.33E-02 |
| 70 | GO:0009965: leaf morphogenesis | 1.44E-02 |
| 71 | GO:0009734: auxin-activated signaling pathway | 1.46E-02 |
| 72 | GO:0006260: DNA replication | 1.51E-02 |
| 73 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.67E-02 |
| 74 | GO:0009620: response to fungus | 1.97E-02 |
| 75 | GO:0018105: peptidyl-serine phosphorylation | 2.14E-02 |
| 76 | GO:0009058: biosynthetic process | 2.55E-02 |
| 77 | GO:0010150: leaf senescence | 3.09E-02 |
| 78 | GO:0009451: RNA modification | 3.15E-02 |
| 79 | GO:0006470: protein dephosphorylation | 3.40E-02 |
| 80 | GO:0009414: response to water deprivation | 3.65E-02 |
| 81 | GO:0042742: defense response to bacterium | 3.73E-02 |
| 82 | GO:0006970: response to osmotic stress | 4.45E-02 |
| 83 | GO:0009723: response to ethylene | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 2 | GO:0052821: DNA-7-methyladenine glycosylase activity | 0.00E+00 |
| 3 | GO:0003905: alkylbase DNA N-glycosylase activity | 0.00E+00 |
| 4 | GO:0052822: DNA-3-methylguanine glycosylase activity | 0.00E+00 |
| 5 | GO:0043916: DNA-7-methylguanine glycosylase activity | 0.00E+00 |
| 6 | GO:0004815: aspartate-tRNA ligase activity | 5.79E-05 |
| 7 | GO:0019786: Atg8-specific protease activity | 5.79E-05 |
| 8 | GO:0019781: NEDD8 activating enzyme activity | 1.41E-04 |
| 9 | GO:0019779: Atg8 activating enzyme activity | 1.41E-04 |
| 10 | GO:0045140: inositol phosphoceramide synthase activity | 1.41E-04 |
| 11 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.41E-04 |
| 12 | GO:0004816: asparagine-tRNA ligase activity | 2.40E-04 |
| 13 | GO:0052692: raffinose alpha-galactosidase activity | 2.40E-04 |
| 14 | GO:0005093: Rab GDP-dissociation inhibitor activity | 2.40E-04 |
| 15 | GO:0004557: alpha-galactosidase activity | 2.40E-04 |
| 16 | GO:0031176: endo-1,4-beta-xylanase activity | 3.49E-04 |
| 17 | GO:0019776: Atg8 ligase activity | 4.66E-04 |
| 18 | GO:0008725: DNA-3-methyladenine glycosylase activity | 5.92E-04 |
| 19 | GO:0008641: small protein activating enzyme activity | 5.92E-04 |
| 20 | GO:0102391: decanoate--CoA ligase activity | 8.63E-04 |
| 21 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.01E-03 |
| 22 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.32E-03 |
| 23 | GO:0016844: strictosidine synthase activity | 1.65E-03 |
| 24 | GO:0008047: enzyme activator activity | 1.83E-03 |
| 25 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.02E-03 |
| 26 | GO:0015035: protein disulfide oxidoreductase activity | 2.21E-03 |
| 27 | GO:0000175: 3'-5'-exoribonuclease activity | 2.41E-03 |
| 28 | GO:0004535: poly(A)-specific ribonuclease activity | 2.62E-03 |
| 29 | GO:0051536: iron-sulfur cluster binding | 3.26E-03 |
| 30 | GO:0004407: histone deacetylase activity | 3.26E-03 |
| 31 | GO:0008408: 3'-5' exonuclease activity | 3.72E-03 |
| 32 | GO:0004540: ribonuclease activity | 3.72E-03 |
| 33 | GO:0003727: single-stranded RNA binding | 4.44E-03 |
| 34 | GO:0047134: protein-disulfide reductase activity | 4.69E-03 |
| 35 | GO:0004402: histone acetyltransferase activity | 4.95E-03 |
| 36 | GO:0004791: thioredoxin-disulfide reductase activity | 5.48E-03 |
| 37 | GO:0004197: cysteine-type endopeptidase activity | 6.31E-03 |
| 38 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.59E-03 |
| 39 | GO:0016791: phosphatase activity | 6.88E-03 |
| 40 | GO:0016597: amino acid binding | 7.47E-03 |
| 41 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 8.40E-03 |
| 42 | GO:0008375: acetylglucosaminyltransferase activity | 8.40E-03 |
| 43 | GO:0004683: calmodulin-dependent protein kinase activity | 8.71E-03 |
| 44 | GO:0004721: phosphoprotein phosphatase activity | 8.71E-03 |
| 45 | GO:0004004: ATP-dependent RNA helicase activity | 8.71E-03 |
| 46 | GO:0004722: protein serine/threonine phosphatase activity | 9.22E-03 |
| 47 | GO:0005096: GTPase activator activity | 9.69E-03 |
| 48 | GO:0030145: manganese ion binding | 1.04E-02 |
| 49 | GO:0003677: DNA binding | 1.48E-02 |
| 50 | GO:0051287: NAD binding | 1.51E-02 |
| 51 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.63E-02 |
| 52 | GO:0008234: cysteine-type peptidase activity | 1.75E-02 |
| 53 | GO:0022857: transmembrane transporter activity | 2.01E-02 |
| 54 | GO:0016746: transferase activity, transferring acyl groups | 2.14E-02 |
| 55 | GO:0008026: ATP-dependent helicase activity | 2.19E-02 |
| 56 | GO:0004386: helicase activity | 2.23E-02 |
| 57 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.44E-02 |
| 58 | GO:0005515: protein binding | 2.65E-02 |
| 59 | GO:0015144: carbohydrate transmembrane transporter activity | 2.80E-02 |
| 60 | GO:0005351: sugar:proton symporter activity | 3.04E-02 |
| 61 | GO:0008194: UDP-glycosyltransferase activity | 3.35E-02 |
| 62 | GO:0005509: calcium ion binding | 3.45E-02 |
| 63 | GO:0042802: identical protein binding | 3.67E-02 |
| 64 | GO:0003824: catalytic activity | 4.09E-02 |
| 65 | GO:0008168: methyltransferase activity | 4.11E-02 |
| 66 | GO:0000287: magnesium ion binding | 4.17E-02 |
| 67 | GO:0016788: hydrolase activity, acting on ester bonds | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005778: peroxisomal membrane | 2.05E-05 |
| 3 | GO:0030014: CCR4-NOT complex | 5.79E-05 |
| 4 | GO:0005741: mitochondrial outer membrane | 1.87E-04 |
| 5 | GO:0033588: Elongator holoenzyme complex | 3.49E-04 |
| 6 | GO:0005775: vacuolar lumen | 3.49E-04 |
| 7 | GO:0030658: transport vesicle membrane | 3.49E-04 |
| 8 | GO:0005719: nuclear euchromatin | 3.49E-04 |
| 9 | GO:0005776: autophagosome | 4.66E-04 |
| 10 | GO:0005777: peroxisome | 6.58E-04 |
| 11 | GO:0005829: cytosol | 7.37E-04 |
| 12 | GO:0005802: trans-Golgi network | 1.08E-03 |
| 13 | GO:0000421: autophagosome membrane | 1.16E-03 |
| 14 | GO:0017119: Golgi transport complex | 1.83E-03 |
| 15 | GO:0005764: lysosome | 2.62E-03 |
| 16 | GO:0043234: protein complex | 3.04E-03 |
| 17 | GO:0031410: cytoplasmic vesicle | 3.95E-03 |
| 18 | GO:0000790: nuclear chromatin | 4.69E-03 |
| 19 | GO:0005768: endosome | 6.82E-03 |
| 20 | GO:0031902: late endosome membrane | 1.25E-02 |
| 21 | GO:0005794: Golgi apparatus | 1.58E-02 |
| 22 | GO:0005773: vacuole | 1.92E-02 |
| 23 | GO:0016020: membrane | 2.30E-02 |
| 24 | GO:0005615: extracellular space | 3.35E-02 |
| 25 | GO:0005737: cytoplasm | 4.52E-02 |
| 26 | GO:0005874: microtubule | 4.80E-02 |