GO Enrichment Analysis of Co-expressed Genes with
AT4G28370
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 2 | GO:0010636: positive regulation of mitochondrial fusion | 0.00E+00 |
| 3 | GO:0048312: intracellular distribution of mitochondria | 0.00E+00 |
| 4 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 5 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 6 | GO:1901017: negative regulation of potassium ion transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0010360: negative regulation of anion channel activity | 0.00E+00 |
| 8 | GO:0032497: detection of lipopolysaccharide | 0.00E+00 |
| 9 | GO:0006983: ER overload response | 0.00E+00 |
| 10 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 11 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 12 | GO:0006182: cGMP biosynthetic process | 0.00E+00 |
| 13 | GO:0006468: protein phosphorylation | 1.02E-05 |
| 14 | GO:0006014: D-ribose metabolic process | 3.99E-05 |
| 15 | GO:0016559: peroxisome fission | 9.72E-05 |
| 16 | GO:0007292: female gamete generation | 1.42E-04 |
| 17 | GO:1902361: mitochondrial pyruvate transmembrane transport | 1.42E-04 |
| 18 | GO:0010265: SCF complex assembly | 1.42E-04 |
| 19 | GO:0035266: meristem growth | 1.42E-04 |
| 20 | GO:0008202: steroid metabolic process | 1.80E-04 |
| 21 | GO:0043069: negative regulation of programmed cell death | 2.13E-04 |
| 22 | GO:0000266: mitochondrial fission | 2.87E-04 |
| 23 | GO:0050684: regulation of mRNA processing | 3.25E-04 |
| 24 | GO:0051788: response to misfolded protein | 3.25E-04 |
| 25 | GO:0043066: negative regulation of apoptotic process | 3.25E-04 |
| 26 | GO:0006850: mitochondrial pyruvate transport | 3.25E-04 |
| 27 | GO:0015865: purine nucleotide transport | 3.25E-04 |
| 28 | GO:0042325: regulation of phosphorylation | 3.25E-04 |
| 29 | GO:0019441: tryptophan catabolic process to kynurenine | 3.25E-04 |
| 30 | GO:0080183: response to photooxidative stress | 3.25E-04 |
| 31 | GO:0006626: protein targeting to mitochondrion | 3.27E-04 |
| 32 | GO:0060968: regulation of gene silencing | 5.33E-04 |
| 33 | GO:0032784: regulation of DNA-templated transcription, elongation | 5.33E-04 |
| 34 | GO:2001289: lipid X metabolic process | 7.63E-04 |
| 35 | GO:0070301: cellular response to hydrogen peroxide | 7.63E-04 |
| 36 | GO:0046902: regulation of mitochondrial membrane permeability | 7.63E-04 |
| 37 | GO:0072334: UDP-galactose transmembrane transport | 7.63E-04 |
| 38 | GO:0009399: nitrogen fixation | 7.63E-04 |
| 39 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 7.63E-04 |
| 40 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 8.15E-04 |
| 41 | GO:0033320: UDP-D-xylose biosynthetic process | 1.01E-03 |
| 42 | GO:0042991: transcription factor import into nucleus | 1.01E-03 |
| 43 | GO:0006542: glutamine biosynthetic process | 1.01E-03 |
| 44 | GO:0019252: starch biosynthetic process | 1.14E-03 |
| 45 | GO:0046283: anthocyanin-containing compound metabolic process | 1.28E-03 |
| 46 | GO:0007029: endoplasmic reticulum organization | 1.28E-03 |
| 47 | GO:1901657: glycosyl compound metabolic process | 1.38E-03 |
| 48 | GO:0048232: male gamete generation | 1.57E-03 |
| 49 | GO:0043248: proteasome assembly | 1.57E-03 |
| 50 | GO:0042732: D-xylose metabolic process | 1.57E-03 |
| 51 | GO:0045040: protein import into mitochondrial outer membrane | 1.57E-03 |
| 52 | GO:1900425: negative regulation of defense response to bacterium | 1.57E-03 |
| 53 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.57E-03 |
| 54 | GO:0048827: phyllome development | 1.57E-03 |
| 55 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.88E-03 |
| 56 | GO:0048280: vesicle fusion with Golgi apparatus | 1.88E-03 |
| 57 | GO:1902074: response to salt | 2.21E-03 |
| 58 | GO:0010311: lateral root formation | 2.38E-03 |
| 59 | GO:1900150: regulation of defense response to fungus | 2.56E-03 |
| 60 | GO:0010078: maintenance of root meristem identity | 2.56E-03 |
| 61 | GO:2000070: regulation of response to water deprivation | 2.56E-03 |
| 62 | GO:0045087: innate immune response | 2.86E-03 |
| 63 | GO:0030968: endoplasmic reticulum unfolded protein response | 2.93E-03 |
| 64 | GO:0009808: lignin metabolic process | 2.93E-03 |
| 65 | GO:0007338: single fertilization | 3.31E-03 |
| 66 | GO:0009821: alkaloid biosynthetic process | 3.31E-03 |
| 67 | GO:0016310: phosphorylation | 3.60E-03 |
| 68 | GO:0048366: leaf development | 4.06E-03 |
| 69 | GO:0010629: negative regulation of gene expression | 4.12E-03 |
| 70 | GO:0006896: Golgi to vacuole transport | 4.12E-03 |
| 71 | GO:0048829: root cap development | 4.12E-03 |
| 72 | GO:0010015: root morphogenesis | 4.55E-03 |
| 73 | GO:0000038: very long-chain fatty acid metabolic process | 4.55E-03 |
| 74 | GO:0046777: protein autophosphorylation | 4.72E-03 |
| 75 | GO:0071365: cellular response to auxin stimulus | 4.99E-03 |
| 76 | GO:0046686: response to cadmium ion | 5.37E-03 |
| 77 | GO:0006096: glycolytic process | 5.85E-03 |
| 78 | GO:0009933: meristem structural organization | 5.92E-03 |
| 79 | GO:0009225: nucleotide-sugar metabolic process | 6.41E-03 |
| 80 | GO:0010167: response to nitrate | 6.41E-03 |
| 81 | GO:0090351: seedling development | 6.41E-03 |
| 82 | GO:0009620: response to fungus | 6.43E-03 |
| 83 | GO:0009751: response to salicylic acid | 6.98E-03 |
| 84 | GO:0006874: cellular calcium ion homeostasis | 7.95E-03 |
| 85 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.05E-03 |
| 86 | GO:0007005: mitochondrion organization | 9.05E-03 |
| 87 | GO:0042147: retrograde transport, endosome to Golgi | 1.08E-02 |
| 88 | GO:0006633: fatty acid biosynthetic process | 1.11E-02 |
| 89 | GO:0042391: regulation of membrane potential | 1.14E-02 |
| 90 | GO:0010087: phloem or xylem histogenesis | 1.14E-02 |
| 91 | GO:0010150: leaf senescence | 1.22E-02 |
| 92 | GO:0048544: recognition of pollen | 1.26E-02 |
| 93 | GO:0042752: regulation of circadian rhythm | 1.26E-02 |
| 94 | GO:0006623: protein targeting to vacuole | 1.33E-02 |
| 95 | GO:0048825: cotyledon development | 1.33E-02 |
| 96 | GO:0009749: response to glucose | 1.33E-02 |
| 97 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.39E-02 |
| 98 | GO:0010583: response to cyclopentenone | 1.46E-02 |
| 99 | GO:0009630: gravitropism | 1.46E-02 |
| 100 | GO:0009567: double fertilization forming a zygote and endosperm | 1.60E-02 |
| 101 | GO:0009615: response to virus | 1.81E-02 |
| 102 | GO:0009816: defense response to bacterium, incompatible interaction | 1.88E-02 |
| 103 | GO:0042128: nitrate assimilation | 1.96E-02 |
| 104 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.03E-02 |
| 105 | GO:0006950: response to stress | 2.03E-02 |
| 106 | GO:0006499: N-terminal protein myristoylation | 2.34E-02 |
| 107 | GO:0009407: toxin catabolic process | 2.34E-02 |
| 108 | GO:0009867: jasmonic acid mediated signaling pathway | 2.59E-02 |
| 109 | GO:0016051: carbohydrate biosynthetic process | 2.59E-02 |
| 110 | GO:0045454: cell redox homeostasis | 2.81E-02 |
| 111 | GO:0006839: mitochondrial transport | 2.84E-02 |
| 112 | GO:0006631: fatty acid metabolic process | 2.93E-02 |
| 113 | GO:0006897: endocytosis | 2.93E-02 |
| 114 | GO:0006869: lipid transport | 3.08E-02 |
| 115 | GO:0032259: methylation | 3.31E-02 |
| 116 | GO:0009636: response to toxic substance | 3.37E-02 |
| 117 | GO:0009965: leaf morphogenesis | 3.37E-02 |
| 118 | GO:0009408: response to heat | 3.46E-02 |
| 119 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.55E-02 |
| 120 | GO:0048364: root development | 3.61E-02 |
| 121 | GO:0009753: response to jasmonic acid | 3.71E-02 |
| 122 | GO:0009809: lignin biosynthetic process | 3.83E-02 |
| 123 | GO:0009736: cytokinin-activated signaling pathway | 3.83E-02 |
| 124 | GO:0009733: response to auxin | 4.11E-02 |
| 125 | GO:0048367: shoot system development | 4.42E-02 |
| 126 | GO:0009873: ethylene-activated signaling pathway | 4.45E-02 |
| 127 | GO:0009734: auxin-activated signaling pathway | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 2 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 3 | GO:0004674: protein serine/threonine kinase activity | 1.64E-08 |
| 4 | GO:0016301: kinase activity | 3.73E-08 |
| 5 | GO:0005524: ATP binding | 3.82E-07 |
| 6 | GO:0004747: ribokinase activity | 5.62E-05 |
| 7 | GO:0008865: fructokinase activity | 9.72E-05 |
| 8 | GO:0008142: oxysterol binding | 1.22E-04 |
| 9 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.42E-04 |
| 10 | GO:0004743: pyruvate kinase activity | 1.80E-04 |
| 11 | GO:0030955: potassium ion binding | 1.80E-04 |
| 12 | GO:0032934: sterol binding | 3.25E-04 |
| 13 | GO:0004061: arylformamidase activity | 3.25E-04 |
| 14 | GO:0015036: disulfide oxidoreductase activity | 3.25E-04 |
| 15 | GO:0050833: pyruvate transmembrane transporter activity | 5.33E-04 |
| 16 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 5.33E-04 |
| 17 | GO:0004383: guanylate cyclase activity | 5.33E-04 |
| 18 | GO:0016805: dipeptidase activity | 5.33E-04 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.01E-03 |
| 20 | GO:0070628: proteasome binding | 1.01E-03 |
| 21 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.28E-03 |
| 22 | GO:0004040: amidase activity | 1.28E-03 |
| 23 | GO:0005496: steroid binding | 1.28E-03 |
| 24 | GO:0005471: ATP:ADP antiporter activity | 1.28E-03 |
| 25 | GO:0004356: glutamate-ammonia ligase activity | 1.28E-03 |
| 26 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.57E-03 |
| 27 | GO:0036402: proteasome-activating ATPase activity | 1.57E-03 |
| 28 | GO:0070403: NAD+ binding | 1.88E-03 |
| 29 | GO:0102391: decanoate--CoA ligase activity | 1.88E-03 |
| 30 | GO:0004012: phospholipid-translocating ATPase activity | 1.88E-03 |
| 31 | GO:0102483: scopolin beta-glucosidase activity | 2.05E-03 |
| 32 | GO:0008235: metalloexopeptidase activity | 2.21E-03 |
| 33 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.21E-03 |
| 34 | GO:0008422: beta-glucosidase activity | 3.12E-03 |
| 35 | GO:0000287: magnesium ion binding | 3.22E-03 |
| 36 | GO:0071949: FAD binding | 3.31E-03 |
| 37 | GO:0004364: glutathione transferase activity | 3.54E-03 |
| 38 | GO:0016844: strictosidine synthase activity | 3.71E-03 |
| 39 | GO:0008171: O-methyltransferase activity | 4.12E-03 |
| 40 | GO:0004713: protein tyrosine kinase activity | 4.12E-03 |
| 41 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.55E-03 |
| 42 | GO:0004177: aminopeptidase activity | 4.55E-03 |
| 43 | GO:0008559: xenobiotic-transporting ATPase activity | 4.55E-03 |
| 44 | GO:0004521: endoribonuclease activity | 4.99E-03 |
| 45 | GO:0019888: protein phosphatase regulator activity | 5.45E-03 |
| 46 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.45E-03 |
| 47 | GO:0031625: ubiquitin protein ligase binding | 5.48E-03 |
| 48 | GO:0030553: cGMP binding | 6.41E-03 |
| 49 | GO:0005217: intracellular ligand-gated ion channel activity | 6.41E-03 |
| 50 | GO:0017025: TBP-class protein binding | 6.41E-03 |
| 51 | GO:0004970: ionotropic glutamate receptor activity | 6.41E-03 |
| 52 | GO:0030552: cAMP binding | 6.41E-03 |
| 53 | GO:0015035: protein disulfide oxidoreductase activity | 7.24E-03 |
| 54 | GO:0009055: electron carrier activity | 7.78E-03 |
| 55 | GO:0043424: protein histidine kinase binding | 7.95E-03 |
| 56 | GO:0005216: ion channel activity | 7.95E-03 |
| 57 | GO:0030551: cyclic nucleotide binding | 1.14E-02 |
| 58 | GO:0005249: voltage-gated potassium channel activity | 1.14E-02 |
| 59 | GO:0010181: FMN binding | 1.26E-02 |
| 60 | GO:0004872: receptor activity | 1.33E-02 |
| 61 | GO:0008483: transaminase activity | 1.67E-02 |
| 62 | GO:0004672: protein kinase activity | 1.72E-02 |
| 63 | GO:0051213: dioxygenase activity | 1.81E-02 |
| 64 | GO:0030247: polysaccharide binding | 2.03E-02 |
| 65 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.09E-02 |
| 66 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.11E-02 |
| 67 | GO:0030246: carbohydrate binding | 2.14E-02 |
| 68 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.19E-02 |
| 69 | GO:0004222: metalloendopeptidase activity | 2.34E-02 |
| 70 | GO:0004497: monooxygenase activity | 2.35E-02 |
| 71 | GO:0030145: manganese ion binding | 2.42E-02 |
| 72 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.59E-02 |
| 73 | GO:0000149: SNARE binding | 2.76E-02 |
| 74 | GO:0005484: SNAP receptor activity | 3.10E-02 |
| 75 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.28E-02 |
| 76 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.83E-02 |
| 77 | GO:0008234: cysteine-type peptidase activity | 4.12E-02 |
| 78 | GO:0008289: lipid binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008305: integrin complex | 0.00E+00 |
| 2 | GO:0005886: plasma membrane | 1.48E-08 |
| 3 | GO:0016021: integral component of membrane | 1.24E-06 |
| 4 | GO:0005778: peroxisomal membrane | 1.29E-04 |
| 5 | GO:0031314: extrinsic component of mitochondrial inner membrane | 3.25E-04 |
| 6 | GO:0031902: late endosome membrane | 3.82E-04 |
| 7 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 5.33E-04 |
| 8 | GO:0005741: mitochondrial outer membrane | 6.19E-04 |
| 9 | GO:0005773: vacuole | 6.37E-04 |
| 10 | GO:0031461: cullin-RING ubiquitin ligase complex | 7.63E-04 |
| 11 | GO:0005829: cytosol | 8.62E-04 |
| 12 | GO:0005794: Golgi apparatus | 9.56E-04 |
| 13 | GO:0005783: endoplasmic reticulum | 1.29E-03 |
| 14 | GO:0005789: endoplasmic reticulum membrane | 1.41E-03 |
| 15 | GO:0030140: trans-Golgi network transport vesicle | 1.57E-03 |
| 16 | GO:0030173: integral component of Golgi membrane | 1.88E-03 |
| 17 | GO:0031597: cytosolic proteasome complex | 1.88E-03 |
| 18 | GO:0000794: condensed nuclear chromosome | 2.21E-03 |
| 19 | GO:0031595: nuclear proteasome complex | 2.21E-03 |
| 20 | GO:0030131: clathrin adaptor complex | 2.56E-03 |
| 21 | GO:0031305: integral component of mitochondrial inner membrane | 2.56E-03 |
| 22 | GO:0012507: ER to Golgi transport vesicle membrane | 2.56E-03 |
| 23 | GO:0000325: plant-type vacuole | 2.61E-03 |
| 24 | GO:0005742: mitochondrial outer membrane translocase complex | 2.93E-03 |
| 25 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.71E-03 |
| 26 | GO:0005777: peroxisome | 4.09E-03 |
| 27 | GO:0030125: clathrin vesicle coat | 4.12E-03 |
| 28 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.41E-03 |
| 29 | GO:0005774: vacuolar membrane | 7.07E-03 |
| 30 | GO:0005839: proteasome core complex | 8.49E-03 |
| 31 | GO:0005905: clathrin-coated pit | 8.49E-03 |
| 32 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.02E-02 |
| 33 | GO:0005770: late endosome | 1.20E-02 |
| 34 | GO:0000151: ubiquitin ligase complex | 2.19E-02 |
| 35 | GO:0000786: nucleosome | 2.51E-02 |
| 36 | GO:0016020: membrane | 2.53E-02 |
| 37 | GO:0005819: spindle | 2.76E-02 |
| 38 | GO:0031201: SNARE complex | 2.93E-02 |
| 39 | GO:0005743: mitochondrial inner membrane | 3.22E-02 |
| 40 | GO:0031966: mitochondrial membrane | 3.65E-02 |
| 41 | GO:0000502: proteasome complex | 3.83E-02 |
| 42 | GO:0005635: nuclear envelope | 4.02E-02 |
| 43 | GO:0005834: heterotrimeric G-protein complex | 4.52E-02 |