GO Enrichment Analysis of Co-expressed Genes with
AT4G28050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0042493: response to drug | 0.00E+00 |
| 3 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
| 4 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 5 | GO:0006412: translation | 1.56E-11 |
| 6 | GO:0042254: ribosome biogenesis | 5.02E-09 |
| 7 | GO:0009735: response to cytokinin | 5.38E-07 |
| 8 | GO:0010207: photosystem II assembly | 2.45E-05 |
| 9 | GO:0006183: GTP biosynthetic process | 2.77E-05 |
| 10 | GO:0009772: photosynthetic electron transport in photosystem II | 1.22E-04 |
| 11 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.93E-04 |
| 12 | GO:0060627: regulation of vesicle-mediated transport | 1.93E-04 |
| 13 | GO:0046520: sphingoid biosynthetic process | 1.93E-04 |
| 14 | GO:0010442: guard cell morphogenesis | 1.93E-04 |
| 15 | GO:0042759: long-chain fatty acid biosynthetic process | 1.93E-04 |
| 16 | GO:0032544: plastid translation | 1.95E-04 |
| 17 | GO:0015995: chlorophyll biosynthetic process | 3.43E-04 |
| 18 | GO:0015979: photosynthesis | 3.55E-04 |
| 19 | GO:0052541: plant-type cell wall cellulose metabolic process | 4.33E-04 |
| 20 | GO:0010115: regulation of abscisic acid biosynthetic process | 4.33E-04 |
| 21 | GO:0010541: acropetal auxin transport | 4.33E-04 |
| 22 | GO:0016042: lipid catabolic process | 5.38E-04 |
| 23 | GO:0010143: cutin biosynthetic process | 5.65E-04 |
| 24 | GO:0010025: wax biosynthetic process | 7.02E-04 |
| 25 | GO:0006833: water transport | 7.02E-04 |
| 26 | GO:0010160: formation of animal organ boundary | 7.06E-04 |
| 27 | GO:0015840: urea transport | 7.06E-04 |
| 28 | GO:0006696: ergosterol biosynthetic process | 7.06E-04 |
| 29 | GO:0071484: cellular response to light intensity | 1.01E-03 |
| 30 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.01E-03 |
| 31 | GO:0051639: actin filament network formation | 1.01E-03 |
| 32 | GO:0006241: CTP biosynthetic process | 1.01E-03 |
| 33 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.01E-03 |
| 34 | GO:0006165: nucleoside diphosphate phosphorylation | 1.01E-03 |
| 35 | GO:0006228: UTP biosynthetic process | 1.01E-03 |
| 36 | GO:0009650: UV protection | 1.01E-03 |
| 37 | GO:1901332: negative regulation of lateral root development | 1.01E-03 |
| 38 | GO:0006168: adenine salvage | 1.01E-03 |
| 39 | GO:0006986: response to unfolded protein | 1.01E-03 |
| 40 | GO:0006166: purine ribonucleoside salvage | 1.01E-03 |
| 41 | GO:0009411: response to UV | 1.11E-03 |
| 42 | GO:0051764: actin crosslink formation | 1.34E-03 |
| 43 | GO:0000919: cell plate assembly | 1.34E-03 |
| 44 | GO:0000413: protein peptidyl-prolyl isomerization | 1.40E-03 |
| 45 | GO:0044209: AMP salvage | 1.70E-03 |
| 46 | GO:0006665: sphingolipid metabolic process | 1.70E-03 |
| 47 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.70E-03 |
| 48 | GO:0010236: plastoquinone biosynthetic process | 1.70E-03 |
| 49 | GO:0035435: phosphate ion transmembrane transport | 2.10E-03 |
| 50 | GO:0060918: auxin transport | 2.10E-03 |
| 51 | GO:0042549: photosystem II stabilization | 2.10E-03 |
| 52 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.52E-03 |
| 53 | GO:0042372: phylloquinone biosynthetic process | 2.52E-03 |
| 54 | GO:0006694: steroid biosynthetic process | 2.52E-03 |
| 55 | GO:0048280: vesicle fusion with Golgi apparatus | 2.52E-03 |
| 56 | GO:0010027: thylakoid membrane organization | 2.67E-03 |
| 57 | GO:0071669: plant-type cell wall organization or biogenesis | 2.96E-03 |
| 58 | GO:0009610: response to symbiotic fungus | 2.96E-03 |
| 59 | GO:0009627: systemic acquired resistance | 2.98E-03 |
| 60 | GO:0045490: pectin catabolic process | 3.29E-03 |
| 61 | GO:0042255: ribosome assembly | 3.43E-03 |
| 62 | GO:0006353: DNA-templated transcription, termination | 3.43E-03 |
| 63 | GO:0006526: arginine biosynthetic process | 3.93E-03 |
| 64 | GO:0009808: lignin metabolic process | 3.93E-03 |
| 65 | GO:0010206: photosystem II repair | 4.44E-03 |
| 66 | GO:0015780: nucleotide-sugar transport | 4.44E-03 |
| 67 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.99E-03 |
| 68 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.99E-03 |
| 69 | GO:0030001: metal ion transport | 5.01E-03 |
| 70 | GO:0071555: cell wall organization | 5.32E-03 |
| 71 | GO:0006896: Golgi to vacuole transport | 5.55E-03 |
| 72 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.55E-03 |
| 73 | GO:0006949: syncytium formation | 5.55E-03 |
| 74 | GO:0009640: photomorphogenesis | 5.66E-03 |
| 75 | GO:0042546: cell wall biogenesis | 5.89E-03 |
| 76 | GO:0010015: root morphogenesis | 6.13E-03 |
| 77 | GO:0009773: photosynthetic electron transport in photosystem I | 6.13E-03 |
| 78 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.13E-03 |
| 79 | GO:0008361: regulation of cell size | 6.73E-03 |
| 80 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.73E-03 |
| 81 | GO:0042538: hyperosmotic salinity response | 7.11E-03 |
| 82 | GO:0006006: glucose metabolic process | 7.36E-03 |
| 83 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.87E-03 |
| 84 | GO:0019253: reductive pentose-phosphate cycle | 8.01E-03 |
| 85 | GO:0010540: basipetal auxin transport | 8.01E-03 |
| 86 | GO:0006071: glycerol metabolic process | 9.35E-03 |
| 87 | GO:0000027: ribosomal large subunit assembly | 1.01E-02 |
| 88 | GO:0051017: actin filament bundle assembly | 1.01E-02 |
| 89 | GO:0009740: gibberellic acid mediated signaling pathway | 1.02E-02 |
| 90 | GO:0010026: trichome differentiation | 1.08E-02 |
| 91 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.31E-02 |
| 92 | GO:0048443: stamen development | 1.39E-02 |
| 93 | GO:0006284: base-excision repair | 1.39E-02 |
| 94 | GO:0010091: trichome branching | 1.39E-02 |
| 95 | GO:0009306: protein secretion | 1.39E-02 |
| 96 | GO:0042147: retrograde transport, endosome to Golgi | 1.47E-02 |
| 97 | GO:0042335: cuticle development | 1.55E-02 |
| 98 | GO:0000271: polysaccharide biosynthetic process | 1.55E-02 |
| 99 | GO:0008033: tRNA processing | 1.55E-02 |
| 100 | GO:0034220: ion transmembrane transport | 1.55E-02 |
| 101 | GO:0009958: positive gravitropism | 1.63E-02 |
| 102 | GO:0006520: cellular amino acid metabolic process | 1.63E-02 |
| 103 | GO:0015986: ATP synthesis coupled proton transport | 1.72E-02 |
| 104 | GO:0007018: microtubule-based movement | 1.72E-02 |
| 105 | GO:0006623: protein targeting to vacuole | 1.81E-02 |
| 106 | GO:0042742: defense response to bacterium | 1.86E-02 |
| 107 | GO:0002229: defense response to oomycetes | 1.90E-02 |
| 108 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.90E-02 |
| 109 | GO:0016132: brassinosteroid biosynthetic process | 1.90E-02 |
| 110 | GO:0009734: auxin-activated signaling pathway | 1.91E-02 |
| 111 | GO:0010583: response to cyclopentenone | 1.99E-02 |
| 112 | GO:0032502: developmental process | 1.99E-02 |
| 113 | GO:0009739: response to gibberellin | 2.11E-02 |
| 114 | GO:0009639: response to red or far red light | 2.18E-02 |
| 115 | GO:0009828: plant-type cell wall loosening | 2.18E-02 |
| 116 | GO:0000910: cytokinesis | 2.37E-02 |
| 117 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.77E-02 |
| 118 | GO:0010411: xyloglucan metabolic process | 2.77E-02 |
| 119 | GO:0009826: unidimensional cell growth | 2.81E-02 |
| 120 | GO:0009658: chloroplast organization | 2.92E-02 |
| 121 | GO:0030244: cellulose biosynthetic process | 2.98E-02 |
| 122 | GO:0009813: flavonoid biosynthetic process | 3.09E-02 |
| 123 | GO:0010311: lateral root formation | 3.09E-02 |
| 124 | GO:0009832: plant-type cell wall biogenesis | 3.09E-02 |
| 125 | GO:0006970: response to osmotic stress | 3.15E-02 |
| 126 | GO:0009834: plant-type secondary cell wall biogenesis | 3.20E-02 |
| 127 | GO:0010218: response to far red light | 3.20E-02 |
| 128 | GO:0048527: lateral root development | 3.31E-02 |
| 129 | GO:0055085: transmembrane transport | 3.43E-02 |
| 130 | GO:0006457: protein folding | 3.52E-02 |
| 131 | GO:0009637: response to blue light | 3.53E-02 |
| 132 | GO:0080167: response to karrikin | 3.62E-02 |
| 133 | GO:0006631: fatty acid metabolic process | 3.99E-02 |
| 134 | GO:0042542: response to hydrogen peroxide | 4.11E-02 |
| 135 | GO:0009926: auxin polar transport | 4.23E-02 |
| 136 | GO:0045454: cell redox homeostasis | 4.32E-02 |
| 137 | GO:0008643: carbohydrate transport | 4.47E-02 |
| 138 | GO:0006869: lipid transport | 4.73E-02 |
| 139 | GO:0009664: plant-type cell wall organization | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 7 | GO:0003735: structural constituent of ribosome | 4.00E-14 |
| 8 | GO:0019843: rRNA binding | 4.28E-12 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.11E-06 |
| 10 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.53E-06 |
| 11 | GO:0016851: magnesium chelatase activity | 1.50E-05 |
| 12 | GO:0005528: FK506 binding | 4.21E-05 |
| 13 | GO:0052689: carboxylic ester hydrolase activity | 4.73E-05 |
| 14 | GO:0016788: hydrolase activity, acting on ester bonds | 1.89E-04 |
| 15 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.93E-04 |
| 16 | GO:0000170: sphingosine hydroxylase activity | 1.93E-04 |
| 17 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.93E-04 |
| 18 | GO:0015200: methylammonium transmembrane transporter activity | 1.93E-04 |
| 19 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.93E-04 |
| 20 | GO:0003938: IMP dehydrogenase activity | 4.33E-04 |
| 21 | GO:0042284: sphingolipid delta-4 desaturase activity | 4.33E-04 |
| 22 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.33E-04 |
| 23 | GO:0005504: fatty acid binding | 7.06E-04 |
| 24 | GO:0001872: (1->3)-beta-D-glucan binding | 1.01E-03 |
| 25 | GO:0003999: adenine phosphoribosyltransferase activity | 1.01E-03 |
| 26 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.01E-03 |
| 27 | GO:0004550: nucleoside diphosphate kinase activity | 1.01E-03 |
| 28 | GO:0008097: 5S rRNA binding | 1.01E-03 |
| 29 | GO:0030570: pectate lyase activity | 1.11E-03 |
| 30 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.34E-03 |
| 31 | GO:0052793: pectin acetylesterase activity | 1.34E-03 |
| 32 | GO:0045430: chalcone isomerase activity | 1.34E-03 |
| 33 | GO:0046527: glucosyltransferase activity | 1.34E-03 |
| 34 | GO:0015204: urea transmembrane transporter activity | 1.34E-03 |
| 35 | GO:0004659: prenyltransferase activity | 1.34E-03 |
| 36 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.70E-03 |
| 37 | GO:0009922: fatty acid elongase activity | 1.70E-03 |
| 38 | GO:0004040: amidase activity | 1.70E-03 |
| 39 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.10E-03 |
| 40 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.10E-03 |
| 41 | GO:0008519: ammonium transmembrane transporter activity | 2.10E-03 |
| 42 | GO:0051920: peroxiredoxin activity | 2.52E-03 |
| 43 | GO:0051753: mannan synthase activity | 2.52E-03 |
| 44 | GO:0015250: water channel activity | 2.67E-03 |
| 45 | GO:0030674: protein binding, bridging | 3.43E-03 |
| 46 | GO:0016209: antioxidant activity | 3.43E-03 |
| 47 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 4.44E-03 |
| 48 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 4.44E-03 |
| 49 | GO:0051287: NAD binding | 6.85E-03 |
| 50 | GO:0015114: phosphate ion transmembrane transporter activity | 7.36E-03 |
| 51 | GO:0010329: auxin efflux transmembrane transporter activity | 7.36E-03 |
| 52 | GO:0003690: double-stranded DNA binding | 7.90E-03 |
| 53 | GO:0003777: microtubule motor activity | 8.45E-03 |
| 54 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 9.79E-03 |
| 55 | GO:0051087: chaperone binding | 1.08E-02 |
| 56 | GO:0004707: MAP kinase activity | 1.15E-02 |
| 57 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.31E-02 |
| 58 | GO:0008514: organic anion transmembrane transporter activity | 1.39E-02 |
| 59 | GO:0003727: single-stranded RNA binding | 1.39E-02 |
| 60 | GO:0016829: lyase activity | 1.48E-02 |
| 61 | GO:0008080: N-acetyltransferase activity | 1.63E-02 |
| 62 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.63E-02 |
| 63 | GO:0019901: protein kinase binding | 1.81E-02 |
| 64 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.90E-02 |
| 65 | GO:0008017: microtubule binding | 1.98E-02 |
| 66 | GO:0051015: actin filament binding | 2.08E-02 |
| 67 | GO:0016791: phosphatase activity | 2.18E-02 |
| 68 | GO:0008483: transaminase activity | 2.27E-02 |
| 69 | GO:0030247: polysaccharide binding | 2.77E-02 |
| 70 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.77E-02 |
| 71 | GO:0046983: protein dimerization activity | 2.86E-02 |
| 72 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.98E-02 |
| 73 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.20E-02 |
| 74 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.31E-02 |
| 75 | GO:0003993: acid phosphatase activity | 3.64E-02 |
| 76 | GO:0000149: SNARE binding | 3.76E-02 |
| 77 | GO:0050661: NADP binding | 3.87E-02 |
| 78 | GO:0005484: SNAP receptor activity | 4.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 1.54E-25 |
| 3 | GO:0009941: chloroplast envelope | 4.96E-16 |
| 4 | GO:0009579: thylakoid | 8.84E-15 |
| 5 | GO:0009507: chloroplast | 4.44E-14 |
| 6 | GO:0005840: ribosome | 6.84E-13 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.43E-10 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 1.72E-08 |
| 9 | GO:0009505: plant-type cell wall | 5.43E-08 |
| 10 | GO:0031977: thylakoid lumen | 1.15E-07 |
| 11 | GO:0009534: chloroplast thylakoid | 1.71E-06 |
| 12 | GO:0010007: magnesium chelatase complex | 6.53E-06 |
| 13 | GO:0030095: chloroplast photosystem II | 2.45E-05 |
| 14 | GO:0031225: anchored component of membrane | 3.64E-05 |
| 15 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.93E-04 |
| 16 | GO:0009923: fatty acid elongase complex | 1.93E-04 |
| 17 | GO:0016020: membrane | 3.78E-04 |
| 18 | GO:0000311: plastid large ribosomal subunit | 4.41E-04 |
| 19 | GO:0005886: plasma membrane | 6.63E-04 |
| 20 | GO:0048046: apoplast | 7.57E-04 |
| 21 | GO:0046658: anchored component of plasma membrane | 8.53E-04 |
| 22 | GO:0032432: actin filament bundle | 1.01E-03 |
| 23 | GO:0005576: extracellular region | 1.46E-03 |
| 24 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.10E-03 |
| 25 | GO:0010319: stromule | 2.38E-03 |
| 26 | GO:0042807: central vacuole | 2.96E-03 |
| 27 | GO:0012507: ER to Golgi transport vesicle membrane | 3.43E-03 |
| 28 | GO:0009506: plasmodesma | 3.66E-03 |
| 29 | GO:0000326: protein storage vacuole | 3.93E-03 |
| 30 | GO:0005884: actin filament | 6.13E-03 |
| 31 | GO:0005874: microtubule | 7.21E-03 |
| 32 | GO:0005618: cell wall | 7.83E-03 |
| 33 | GO:0022625: cytosolic large ribosomal subunit | 8.04E-03 |
| 34 | GO:0009654: photosystem II oxygen evolving complex | 1.08E-02 |
| 35 | GO:0042651: thylakoid membrane | 1.08E-02 |
| 36 | GO:0015935: small ribosomal subunit | 1.15E-02 |
| 37 | GO:0005871: kinesin complex | 1.47E-02 |
| 38 | GO:0009504: cell plate | 1.81E-02 |
| 39 | GO:0009523: photosystem II | 1.81E-02 |
| 40 | GO:0019898: extrinsic component of membrane | 1.81E-02 |
| 41 | GO:0005789: endoplasmic reticulum membrane | 3.48E-02 |
| 42 | GO:0005819: spindle | 3.76E-02 |
| 43 | GO:0031201: SNARE complex | 3.99E-02 |
| 44 | GO:0031902: late endosome membrane | 3.99E-02 |
| 45 | GO:0005802: trans-Golgi network | 4.57E-02 |