co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G25000

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0046109: uridine biosynthetic process	0.00E+00
3	GO:0043609: regulation of carbon utilization	1.77E-05
4	GO:0048455: stamen formation	1.77E-05
5	GO:0051788: response to misfolded protein	4.61E-05
6	GO:0042325: regulation of phosphorylation	4.61E-05
7	GO:0019441: tryptophan catabolic process to kynurenine	4.61E-05
8	GO:0031538: negative regulation of anthocyanin metabolic process	4.61E-05
9	GO:0071329: cellular response to sucrose stimulus	1.23E-04
10	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.23E-04
11	GO:0043967: histone H4 acetylation	1.23E-04
12	GO:2001289: lipid X metabolic process	1.23E-04
13	GO:0043248: proteasome assembly	2.72E-04
14	GO:0043966: histone H3 acetylation	3.27E-04
15	GO:0006368: transcription elongation from RNA polymerase II promoter	3.84E-04
16	GO:0048528: post-embryonic root development	3.84E-04
17	GO:0006096: glycolytic process	4.26E-04
18	GO:0010928: regulation of auxin mediated signaling pathway	4.43E-04
19	GO:0035265: organ growth	4.43E-04
20	GO:2000024: regulation of leaf development	5.68E-04
21	GO:0043069: negative regulation of programmed cell death	6.99E-04
22	GO:0010150: leaf senescence	8.60E-04
23	GO:0030150: protein import into mitochondrial matrix	1.21E-03
24	GO:0006012: galactose metabolic process	1.54E-03
25	GO:0008284: positive regulation of cell proliferation	1.72E-03
26	GO:0046323: glucose import	1.90E-03
27	GO:0071554: cell wall organization or biogenesis	2.19E-03
28	GO:0007264: small GTPase mediated signal transduction	2.29E-03
29	GO:0030163: protein catabolic process	2.39E-03
30	GO:0010029: regulation of seed germination	2.91E-03
31	GO:0006974: cellular response to DNA damage stimulus	3.02E-03
32	GO:0030244: cellulose biosynthetic process	3.36E-03
33	GO:0010311: lateral root formation	3.47E-03
34	GO:0048767: root hair elongation	3.47E-03
35	GO:0009738: abscisic acid-activated signaling pathway	3.98E-03
36	GO:0008283: cell proliferation	4.68E-03
37	GO:0009744: response to sucrose	4.68E-03
38	GO:0015031: protein transport	1.06E-02
39	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.16E-02
40	GO:0007166: cell surface receptor signaling pathway	1.18E-02
41	GO:0046686: response to cadmium ion	1.30E-02
42	GO:0048366: leaf development	1.64E-02
43	GO:0080167: response to karrikin	1.70E-02
44	GO:0009737: response to abscisic acid	1.78E-02
45	GO:0009408: response to heat	2.25E-02
46	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.75E-02
47	GO:0009651: response to salt stress	2.80E-02
48	GO:0009734: auxin-activated signaling pathway	2.87E-02
49	GO:0009735: response to cytokinin	3.18E-02
50	GO:0009555: pollen development	3.39E-02
51	GO:0006511: ubiquitin-dependent protein catabolic process	4.21E-02
52	GO:0006952: defense response	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
2	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
3	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
4	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
5	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
6	GO:0030955: potassium ion binding	7.57E-06
7	GO:0004743: pyruvate kinase activity	7.57E-06
8	GO:0015168: glycerol transmembrane transporter activity	1.77E-05
9	GO:0004061: arylformamidase activity	4.61E-05
10	GO:0015036: disulfide oxidoreductase activity	4.61E-05
11	GO:0004751: ribose-5-phosphate isomerase activity	8.18E-05
12	GO:0005093: Rab GDP-dissociation inhibitor activity	8.18E-05
13	GO:0005354: galactose transmembrane transporter activity	1.23E-04
14	GO:0001653: peptide receptor activity	1.23E-04
15	GO:0000993: RNA polymerase II core binding	1.69E-04
16	GO:0015145: monosaccharide transmembrane transporter activity	2.19E-04
17	GO:0005496: steroid binding	2.19E-04
18	GO:0031593: polyubiquitin binding	2.72E-04
19	GO:0003978: UDP-glucose 4-epimerase activity	3.27E-04
20	GO:0071949: FAD binding	5.68E-04
21	GO:0015266: protein channel activity	9.08E-04
22	GO:0019888: protein phosphatase regulator activity	9.08E-04
23	GO:0000287: magnesium ion binding	1.28E-03
24	GO:0004402: histone acetyltransferase activity	1.81E-03
25	GO:0005355: glucose transmembrane transporter activity	2.00E-03
26	GO:0016413: O-acetyltransferase activity	2.70E-03
27	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.36E-03
28	GO:0005096: GTPase activator activity	3.47E-03
29	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.60E-03
30	GO:0015144: carbohydrate transmembrane transporter activity	9.73E-03
31	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.02E-02
32	GO:0005351: sugar:proton symporter activity	1.06E-02
33	GO:0016301: kinase activity	1.08E-02
34	GO:0016491: oxidoreductase activity	1.09E-02
35	GO:0004497: monooxygenase activity	1.70E-02
36	GO:0016740: transferase activity	3.90E-02

Rank	GO Term	Adjusted P value
1	GO:0008023: transcription elongation factor complex	1.77E-05
2	GO:0031314: extrinsic component of mitochondrial inner membrane	4.61E-05
3	GO:0033588: Elongator holoenzyme complex	1.23E-04
4	GO:0000123: histone acetyltransferase complex	3.84E-04
5	GO:0031305: integral component of mitochondrial inner membrane	4.43E-04
6	GO:0008540: proteasome regulatory particle, base subcomplex	6.32E-04
7	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.63E-03
8	GO:0000502: proteasome complex	5.75E-03
9	GO:0005829: cytosol	7.64E-03
10	GO:0005794: Golgi apparatus	1.20E-02
11	GO:0005743: mitochondrial inner membrane	2.14E-02
12	GO:0005886: plasma membrane	2.65E-02
13	GO:0005777: peroxisome	3.74E-02