co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G24920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0045792: negative regulation of cell size	0.00E+00
3	GO:1900367: positive regulation of defense response to insect	0.00E+00
4	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
5	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
6	GO:0019428: allantoin biosynthetic process	0.00E+00
7	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
8	GO:0072321: chaperone-mediated protein transport	0.00E+00
9	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
10	GO:0071327: cellular response to trehalose stimulus	0.00E+00
11	GO:0006457: protein folding	2.77E-09
12	GO:0009617: response to bacterium	1.74E-08
13	GO:0042742: defense response to bacterium	3.90E-08
14	GO:0009626: plant-type hypersensitive response	2.25E-07
15	GO:0010942: positive regulation of cell death	1.62E-06
16	GO:0034976: response to endoplasmic reticulum stress	2.63E-06
17	GO:0009627: systemic acquired resistance	3.16E-06
18	GO:0031349: positive regulation of defense response	3.71E-06
19	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.71E-06
20	GO:0010618: aerenchyma formation	3.71E-06
21	GO:0055074: calcium ion homeostasis	1.33E-05
22	GO:0051707: response to other organism	1.65E-05
23	GO:0006952: defense response	1.74E-05
24	GO:0006979: response to oxidative stress	1.86E-05
25	GO:0006468: protein phosphorylation	2.62E-05
26	GO:0009751: response to salicylic acid	5.89E-05
27	GO:0006465: signal peptide processing	8.49E-05
28	GO:0009863: salicylic acid mediated signaling pathway	9.80E-05
29	GO:0031348: negative regulation of defense response	1.49E-04
30	GO:0010310: regulation of hydrogen peroxide metabolic process	1.69E-04
31	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.69E-04
32	GO:0009609: response to symbiotic bacterium	2.84E-04
33	GO:0055081: anion homeostasis	2.84E-04
34	GO:0009700: indole phytoalexin biosynthetic process	2.84E-04
35	GO:1901183: positive regulation of camalexin biosynthetic process	2.84E-04
36	GO:0010230: alternative respiration	2.84E-04
37	GO:0046244: salicylic acid catabolic process	2.84E-04
38	GO:0060862: negative regulation of floral organ abscission	2.84E-04
39	GO:0006144: purine nucleobase metabolic process	2.84E-04
40	GO:0006083: acetate metabolic process	2.84E-04
41	GO:0019276: UDP-N-acetylgalactosamine metabolic process	2.84E-04
42	GO:0001560: regulation of cell growth by extracellular stimulus	2.84E-04
43	GO:0019628: urate catabolic process	2.84E-04
44	GO:0006047: UDP-N-acetylglucosamine metabolic process	2.84E-04
45	GO:0051245: negative regulation of cellular defense response	2.84E-04
46	GO:0030968: endoplasmic reticulum unfolded protein response	3.44E-04
47	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.44E-04
48	GO:0046686: response to cadmium ion	3.60E-04
49	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.91E-04
50	GO:0009553: embryo sac development	5.41E-04
51	GO:0001666: response to hypoxia	5.68E-04
52	GO:0043069: negative regulation of programmed cell death	5.73E-04
53	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.25E-04
54	GO:0015865: purine nucleotide transport	6.25E-04
55	GO:0051252: regulation of RNA metabolic process	6.25E-04
56	GO:0031204: posttranslational protein targeting to membrane, translocation	6.25E-04
57	GO:2000072: regulation of defense response to fungus, incompatible interaction	6.25E-04
58	GO:0009651: response to salt stress	9.77E-04
59	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.01E-03
60	GO:1902626: assembly of large subunit precursor of preribosome	1.01E-03
61	GO:0010581: regulation of starch biosynthetic process	1.01E-03
62	GO:1900140: regulation of seedling development	1.01E-03
63	GO:0010359: regulation of anion channel activity	1.01E-03
64	GO:0072661: protein targeting to plasma membrane	1.01E-03
65	GO:0006011: UDP-glucose metabolic process	1.01E-03
66	GO:0045039: protein import into mitochondrial inner membrane	1.01E-03
67	GO:0048281: inflorescence morphogenesis	1.01E-03
68	GO:0045454: cell redox homeostasis	1.05E-03
69	GO:0006886: intracellular protein transport	1.11E-03
70	GO:0000162: tryptophan biosynthetic process	1.19E-03
71	GO:0010150: leaf senescence	1.29E-03
72	GO:0006612: protein targeting to membrane	1.45E-03
73	GO:0015696: ammonium transport	1.45E-03
74	GO:0010148: transpiration	1.45E-03
75	GO:0051289: protein homotetramerization	1.45E-03
76	GO:0000187: activation of MAPK activity	1.45E-03
77	GO:0002239: response to oomycetes	1.45E-03
78	GO:0043207: response to external biotic stimulus	1.45E-03
79	GO:0046902: regulation of mitochondrial membrane permeability	1.45E-03
80	GO:0072334: UDP-galactose transmembrane transport	1.45E-03
81	GO:0016998: cell wall macromolecule catabolic process	1.60E-03
82	GO:0009625: response to insect	1.91E-03
83	GO:0010363: regulation of plant-type hypersensitive response	1.94E-03
84	GO:0080142: regulation of salicylic acid biosynthetic process	1.94E-03
85	GO:0060548: negative regulation of cell death	1.94E-03
86	GO:0072488: ammonium transmembrane transport	1.94E-03
87	GO:0000460: maturation of 5.8S rRNA	1.94E-03
88	GO:0009306: protein secretion	2.07E-03
89	GO:0015031: protein transport	2.27E-03
90	GO:0000304: response to singlet oxygen	2.48E-03
91	GO:0009697: salicylic acid biosynthetic process	2.48E-03
92	GO:0046283: anthocyanin-containing compound metabolic process	2.48E-03
93	GO:0031365: N-terminal protein amino acid modification	2.48E-03
94	GO:0010225: response to UV-C	2.48E-03
95	GO:0009620: response to fungus	2.98E-03
96	GO:0060918: auxin transport	3.06E-03
97	GO:0000470: maturation of LSU-rRNA	3.06E-03
98	GO:0043248: proteasome assembly	3.06E-03
99	GO:0000302: response to reactive oxygen species	3.22E-03
100	GO:0016192: vesicle-mediated transport	3.77E-03
101	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	4.34E-03
102	GO:0009610: response to symbiotic fungus	4.34E-03
103	GO:0071446: cellular response to salicylic acid stimulus	4.34E-03
104	GO:0009615: response to virus	4.64E-03
105	GO:0009816: defense response to bacterium, incompatible interaction	4.91E-03
106	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.03E-03
107	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.03E-03
108	GO:0006605: protein targeting	5.03E-03
109	GO:0031540: regulation of anthocyanin biosynthetic process	5.03E-03
110	GO:0006102: isocitrate metabolic process	5.03E-03
111	GO:0006906: vesicle fusion	5.19E-03
112	GO:0050832: defense response to fungus	5.34E-03
113	GO:0010120: camalexin biosynthetic process	5.77E-03
114	GO:0010204: defense response signaling pathway, resistance gene-independent	5.77E-03
115	GO:0009699: phenylpropanoid biosynthetic process	5.77E-03
116	GO:0008219: cell death	6.06E-03
117	GO:0010112: regulation of systemic acquired resistance	6.54E-03
118	GO:0015780: nucleotide-sugar transport	6.54E-03
119	GO:0010119: regulation of stomatal movement	7.01E-03
120	GO:1900426: positive regulation of defense response to bacterium	7.35E-03
121	GO:0010205: photoinhibition	7.35E-03
122	GO:0009867: jasmonic acid mediated signaling pathway	7.68E-03
123	GO:0045087: innate immune response	7.68E-03
124	GO:0006099: tricarboxylic acid cycle	8.04E-03
125	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.19E-03
126	GO:0006032: chitin catabolic process	8.19E-03
127	GO:0010215: cellulose microfibril organization	8.19E-03
128	GO:0072593: reactive oxygen species metabolic process	9.06E-03
129	GO:0006887: exocytosis	9.14E-03
130	GO:0002213: defense response to insect	9.96E-03
131	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.96E-03
132	GO:0016925: protein sumoylation	9.96E-03
133	GO:0071365: cellular response to auxin stimulus	9.96E-03
134	GO:0012501: programmed cell death	9.96E-03
135	GO:0006626: protein targeting to mitochondrion	1.09E-02
136	GO:0010075: regulation of meristem growth	1.09E-02
137	GO:0006829: zinc II ion transport	1.09E-02
138	GO:0006541: glutamine metabolic process	1.19E-02
139	GO:0002237: response to molecule of bacterial origin	1.19E-02
140	GO:0009934: regulation of meristem structural organization	1.19E-02
141	GO:0048467: gynoecium development	1.19E-02
142	GO:0070588: calcium ion transmembrane transport	1.29E-02
143	GO:0042343: indole glucosinolate metabolic process	1.29E-02
144	GO:0000027: ribosomal large subunit assembly	1.50E-02
145	GO:0080147: root hair cell development	1.50E-02
146	GO:0009555: pollen development	1.51E-02
147	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.61E-02
148	GO:0046777: protein autophosphorylation	1.68E-02
149	GO:0048278: vesicle docking	1.72E-02
150	GO:0015992: proton transport	1.72E-02
151	GO:0098542: defense response to other organism	1.72E-02
152	GO:0009814: defense response, incompatible interaction	1.83E-02
153	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.83E-02
154	GO:0030433: ubiquitin-dependent ERAD pathway	1.83E-02
155	GO:0019748: secondary metabolic process	1.83E-02
156	GO:0009624: response to nematode	1.91E-02
157	GO:0009411: response to UV	1.95E-02
158	GO:0018105: peptidyl-serine phosphorylation	1.97E-02
159	GO:0009742: brassinosteroid mediated signaling pathway	2.03E-02
160	GO:0019722: calcium-mediated signaling	2.07E-02
161	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.19E-02
162	GO:0042391: regulation of membrane potential	2.31E-02
163	GO:0008033: tRNA processing	2.31E-02
164	GO:0000413: protein peptidyl-prolyl isomerization	2.31E-02
165	GO:0010051: xylem and phloem pattern formation	2.31E-02
166	GO:0010197: polar nucleus fusion	2.44E-02
167	GO:0048868: pollen tube development	2.44E-02
168	GO:0006629: lipid metabolic process	2.52E-02
169	GO:0009408: response to heat	2.52E-02
170	GO:0015986: ATP synthesis coupled proton transport	2.57E-02
171	GO:0061025: membrane fusion	2.57E-02
172	GO:0006623: protein targeting to vacuole	2.70E-02
173	GO:0002229: defense response to oomycetes	2.83E-02
174	GO:0006891: intra-Golgi vesicle-mediated transport	2.83E-02
175	GO:0010193: response to ozone	2.83E-02
176	GO:0009567: double fertilization forming a zygote and endosperm	3.25E-02
177	GO:0051607: defense response to virus	3.54E-02
178	GO:0016049: cell growth	4.29E-02
179	GO:0006499: N-terminal protein myristoylation	4.76E-02
180	GO:0009407: toxin catabolic process	4.76E-02
181	GO:0007165: signal transduction	4.82E-02
182	GO:0009631: cold acclimation	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0005212: structural constituent of eye lens	0.00E+00
4	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
5	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
6	GO:0008752: FMN reductase activity	0.00E+00
7	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
8	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
9	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
10	GO:0051082: unfolded protein binding	3.49E-07
11	GO:0005524: ATP binding	7.10E-06
12	GO:0005509: calcium ion binding	1.30E-05
13	GO:0016301: kinase activity	1.63E-05
14	GO:0005460: UDP-glucose transmembrane transporter activity	2.99E-05
15	GO:0004674: protein serine/threonine kinase activity	3.82E-05
16	GO:0047631: ADP-ribose diphosphatase activity	8.49E-05
17	GO:0005459: UDP-galactose transmembrane transporter activity	8.49E-05
18	GO:0000210: NAD+ diphosphatase activity	1.23E-04
19	GO:0004602: glutathione peroxidase activity	1.69E-04
20	GO:0008565: protein transporter activity	1.74E-04
21	GO:0003756: protein disulfide isomerase activity	1.91E-04
22	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.80E-04
23	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.84E-04
24	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.84E-04
25	GO:0004048: anthranilate phosphoribosyltransferase activity	2.84E-04
26	GO:0048037: cofactor binding	2.84E-04
27	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	2.84E-04
28	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	2.84E-04
29	GO:0003987: acetate-CoA ligase activity	2.84E-04
30	GO:0017110: nucleoside-diphosphatase activity	6.25E-04
31	GO:0008428: ribonuclease inhibitor activity	6.25E-04
32	GO:0004775: succinate-CoA ligase (ADP-forming) activity	6.25E-04
33	GO:0004338: glucan exo-1,3-beta-glucosidase activity	6.25E-04
34	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	6.25E-04
35	GO:0004776: succinate-CoA ligase (GDP-forming) activity	6.25E-04
36	GO:0080041: ADP-ribose pyrophosphohydrolase activity	6.25E-04
37	GO:0043021: ribonucleoprotein complex binding	6.25E-04
38	GO:0004806: triglyceride lipase activity	6.98E-04
39	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	7.94E-04
40	GO:0004148: dihydrolipoyl dehydrogenase activity	1.01E-03
41	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.01E-03
42	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	1.01E-03
43	GO:0004049: anthranilate synthase activity	1.01E-03
44	GO:0000030: mannosyltransferase activity	1.01E-03
45	GO:0035529: NADH pyrophosphatase activity	1.45E-03
46	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.45E-03
47	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.45E-03
48	GO:0051287: NAD binding	1.86E-03
49	GO:0043495: protein anchor	1.94E-03
50	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.94E-03
51	GO:0016298: lipase activity	2.23E-03
52	GO:0008948: oxaloacetate decarboxylase activity	2.48E-03
53	GO:0031386: protein tag	2.48E-03
54	GO:0005471: ATP:ADP antiporter activity	2.48E-03
55	GO:0008641: small protein activating enzyme activity	2.48E-03
56	GO:0010181: FMN binding	2.80E-03
57	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.06E-03
58	GO:0016208: AMP binding	3.06E-03
59	GO:0008519: ammonium transmembrane transporter activity	3.06E-03
60	GO:0004672: protein kinase activity	3.12E-03
61	GO:0004656: procollagen-proline 4-dioxygenase activity	3.68E-03
62	GO:0008320: protein transmembrane transporter activity	4.34E-03
63	GO:0008235: metalloexopeptidase activity	4.34E-03
64	GO:0004427: inorganic diphosphatase activity	4.34E-03
65	GO:0008121: ubiquinol-cytochrome-c reductase activity	4.34E-03
66	GO:0004708: MAP kinase kinase activity	5.03E-03
67	GO:0009931: calcium-dependent protein serine/threonine kinase activity	5.19E-03
68	GO:0004683: calmodulin-dependent protein kinase activity	5.47E-03
69	GO:0030246: carbohydrate binding	6.97E-03
70	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	7.35E-03
71	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.68E-03
72	GO:0005507: copper ion binding	7.69E-03
73	GO:0004713: protein tyrosine kinase activity	8.19E-03
74	GO:0004568: chitinase activity	8.19E-03
75	GO:0000149: SNARE binding	8.40E-03
76	GO:0004177: aminopeptidase activity	9.06E-03
77	GO:0008559: xenobiotic-transporting ATPase activity	9.06E-03
78	GO:0005484: SNAP receptor activity	9.92E-03
79	GO:0005388: calcium-transporting ATPase activity	1.09E-02
80	GO:0015095: magnesium ion transmembrane transporter activity	1.09E-02
81	GO:0031072: heat shock protein binding	1.09E-02
82	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.19E-02
83	GO:0008266: poly(U) RNA binding	1.19E-02
84	GO:0008061: chitin binding	1.29E-02
85	GO:0003712: transcription cofactor activity	1.29E-02
86	GO:0004190: aspartic-type endopeptidase activity	1.29E-02
87	GO:0030552: cAMP binding	1.29E-02
88	GO:0030553: cGMP binding	1.29E-02
89	GO:0005216: ion channel activity	1.60E-02
90	GO:0008324: cation transmembrane transporter activity	1.60E-02
91	GO:0004707: MAP kinase activity	1.72E-02
92	GO:0033612: receptor serine/threonine kinase binding	1.72E-02
93	GO:0016779: nucleotidyltransferase activity	1.83E-02
94	GO:0008810: cellulase activity	1.95E-02
95	GO:0030551: cyclic nucleotide binding	2.31E-02
96	GO:0005249: voltage-gated potassium channel activity	2.31E-02
97	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.44E-02
98	GO:0046873: metal ion transmembrane transporter activity	2.44E-02
99	GO:0030276: clathrin binding	2.44E-02
100	GO:0016853: isomerase activity	2.57E-02
101	GO:0005516: calmodulin binding	2.76E-02
102	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.39E-02
103	GO:0051213: dioxygenase activity	3.68E-02
104	GO:0030247: polysaccharide binding	4.13E-02
105	GO:0016887: ATPase activity	4.32E-02
106	GO:0015238: drug transmembrane transporter activity	4.60E-02
107	GO:0004222: metalloendopeptidase activity	4.76E-02
108	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.93E-02
109	GO:0050897: cobalt ion binding	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0005784: Sec61 translocon complex	0.00E+00
2	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
3	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
4	GO:0005886: plasma membrane	1.85E-12
5	GO:0005783: endoplasmic reticulum	1.96E-12
6	GO:0005788: endoplasmic reticulum lumen	5.04E-11
7	GO:0005774: vacuolar membrane	3.03E-08
8	GO:0005773: vacuole	1.04E-07
9	GO:0016021: integral component of membrane	1.82E-04
10	GO:0005829: cytosol	2.78E-04
11	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	2.84E-04
12	GO:0005787: signal peptidase complex	2.84E-04
13	GO:0031090: organelle membrane	4.15E-04
14	GO:0030665: clathrin-coated vesicle membrane	4.91E-04
15	GO:0005740: mitochondrial envelope	5.73E-04
16	GO:0070545: PeBoW complex	6.25E-04
17	GO:0005901: caveola	6.25E-04
18	GO:0009506: plasmodesma	7.92E-04
19	GO:0005750: mitochondrial respiratory chain complex III	9.62E-04
20	GO:0030176: integral component of endoplasmic reticulum membrane	1.07E-03
21	GO:0005618: cell wall	1.54E-03
22	GO:0030660: Golgi-associated vesicle membrane	1.94E-03
23	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.94E-03
24	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.94E-03
25	GO:0000164: protein phosphatase type 1 complex	2.48E-03
26	GO:0031225: anchored component of membrane	2.66E-03
27	GO:0005789: endoplasmic reticulum membrane	3.40E-03
28	GO:0030173: integral component of Golgi membrane	3.68E-03
29	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	4.34E-03
30	GO:0030687: preribosome, large subunit precursor	4.34E-03
31	GO:0005794: Golgi apparatus	4.99E-03
32	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.03E-03
33	GO:0030131: clathrin adaptor complex	5.03E-03
34	GO:0009514: glyoxysome	5.77E-03
35	GO:0017119: Golgi transport complex	8.19E-03
36	GO:0048046: apoplast	8.57E-03
37	GO:0005765: lysosomal membrane	9.06E-03
38	GO:0031201: SNARE complex	9.14E-03
39	GO:0046658: anchored component of plasma membrane	9.59E-03
40	GO:0009507: chloroplast	9.74E-03
41	GO:0031012: extracellular matrix	1.09E-02
42	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.29E-02
43	GO:0005795: Golgi stack	1.29E-02
44	GO:0005769: early endosome	1.39E-02
45	GO:0005758: mitochondrial intermembrane space	1.50E-02
46	GO:0005747: mitochondrial respiratory chain complex I	1.64E-02
47	GO:0005741: mitochondrial outer membrane	1.72E-02
48	GO:0009504: cell plate	2.70E-02
49	GO:0016592: mediator complex	2.97E-02
50	GO:0032580: Golgi cisterna membrane	3.25E-02
51	GO:0005887: integral component of plasma membrane	3.68E-02
52	GO:0000151: ubiquitin ligase complex	4.45E-02
53	GO:0019005: SCF ubiquitin ligase complex	4.45E-02
54	GO:0000325: plant-type vacuole	4.93E-02