co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G24810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	1.67E-05
2	GO:0006438: valyl-tRNA aminoacylation	1.67E-05
3	GO:0019253: reductive pentose-phosphate cycle	1.68E-05
4	GO:0080092: regulation of pollen tube growth	3.57E-05
5	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.35E-05
6	GO:0016117: carotenoid biosynthetic process	4.82E-05
7	GO:0006000: fructose metabolic process	7.77E-05
8	GO:2001141: regulation of RNA biosynthetic process	1.17E-04
9	GO:0019464: glycine decarboxylation via glycine cleavage system	1.61E-04
10	GO:0009902: chloroplast relocation	1.61E-04
11	GO:1902183: regulation of shoot apical meristem development	2.09E-04
12	GO:0016123: xanthophyll biosynthetic process	2.09E-04
13	GO:0010236: plastoquinone biosynthetic process	2.09E-04
14	GO:0016559: peroxisome fission	4.23E-04
15	GO:0006002: fructose 6-phosphate metabolic process	4.82E-04
16	GO:0071482: cellular response to light stimulus	4.82E-04
17	GO:2000024: regulation of leaf development	5.42E-04
18	GO:0018119: peptidyl-cysteine S-nitrosylation	7.34E-04
19	GO:0019684: photosynthesis, light reaction	7.34E-04
20	GO:0006352: DNA-templated transcription, initiation	7.34E-04
21	GO:0045037: protein import into chloroplast stroma	8.01E-04
22	GO:0006094: gluconeogenesis	8.70E-04
23	GO:0009767: photosynthetic electron transport chain	8.70E-04
24	GO:0005986: sucrose biosynthetic process	8.70E-04
25	GO:0007031: peroxisome organization	1.01E-03
26	GO:0009944: polarity specification of adaxial/abaxial axis	1.16E-03
27	GO:0006418: tRNA aminoacylation for protein translation	1.23E-03
28	GO:0006730: one-carbon metabolic process	1.39E-03
29	GO:0010082: regulation of root meristem growth	1.47E-03
30	GO:0019252: starch biosynthetic process	2.00E-03
31	GO:1901657: glycosyl compound metabolic process	2.28E-03
32	GO:0009853: photorespiration	3.76E-03
33	GO:0016051: carbohydrate biosynthetic process	3.76E-03
34	GO:0009744: response to sucrose	4.47E-03
35	GO:0006096: glycolytic process	6.15E-03
36	GO:0009790: embryo development	9.10E-03
37	GO:0009409: response to cold	1.05E-02
38	GO:0005975: carbohydrate metabolic process	1.18E-02
39	GO:0009658: chloroplast organization	1.39E-02
40	GO:0009860: pollen tube growth	1.47E-02
41	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.66E-02
42	GO:0009793: embryo development ending in seed dormancy	1.80E-02
43	GO:0009751: response to salicylic acid	2.12E-02
44	GO:0006281: DNA repair	2.14E-02
45	GO:0008152: metabolic process	2.29E-02
46	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.61E-02
47	GO:0009735: response to cytokinin	3.02E-02
48	GO:0009416: response to light stimulus	3.22E-02

Rank	GO Term	Adjusted P value
1	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
2	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
3	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.03E-05
4	GO:0004832: valine-tRNA ligase activity	1.67E-05
5	GO:0010291: carotene beta-ring hydroxylase activity	4.35E-05
6	GO:0004618: phosphoglycerate kinase activity	4.35E-05
7	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	4.35E-05
8	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.35E-05
9	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.17E-04
10	GO:0001053: plastid sigma factor activity	1.61E-04
11	GO:0016987: sigma factor activity	1.61E-04
12	GO:0080030: methyl indole-3-acetate esterase activity	2.59E-04
13	GO:0042578: phosphoric ester hydrolase activity	2.59E-04
14	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.11E-04
15	GO:0003887: DNA-directed DNA polymerase activity	1.08E-03
16	GO:0005528: FK506 binding	1.16E-03
17	GO:0004812: aminoacyl-tRNA ligase activity	1.64E-03
18	GO:0003684: damaged DNA binding	2.38E-03
19	GO:0016597: amino acid binding	2.57E-03
20	GO:0102483: scopolin beta-glucosidase activity	2.99E-03
21	GO:0008422: beta-glucosidase activity	3.99E-03
22	GO:0005198: structural molecule activity	4.83E-03
23	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.96E-03
24	GO:0019825: oxygen binding	5.44E-03
25	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.48E-03
26	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.32E-03
27	GO:0008565: protein transporter activity	9.26E-03
28	GO:0042802: identical protein binding	1.21E-02
29	GO:0046982: protein heterodimerization activity	1.37E-02
30	GO:0016788: hydrolase activity, acting on ester bonds	1.41E-02
31	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.84E-02
32	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.99E-02
33	GO:0043565: sequence-specific DNA binding	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.73E-09
2	GO:0009344: nitrite reductase complex [NAD(P)H]	1.67E-05
3	GO:0009941: chloroplast envelope	2.93E-05
4	GO:0010319: stromule	9.77E-05
5	GO:0005960: glycine cleavage complex	1.17E-04
6	GO:0009570: chloroplast stroma	4.58E-04
7	GO:0009535: chloroplast thylakoid membrane	4.63E-04
8	GO:0005779: integral component of peroxisomal membrane	4.82E-04
9	GO:0009579: thylakoid	5.52E-04
10	GO:0009543: chloroplast thylakoid lumen	5.92E-04
11	GO:0005623: cell	6.07E-04
12	GO:0016324: apical plasma membrane	6.68E-04
13	GO:0030095: chloroplast photosystem II	9.39E-04
14	GO:0009654: photosystem II oxygen evolving complex	1.23E-03
15	GO:0019898: extrinsic component of membrane	2.00E-03
16	GO:0005778: peroxisomal membrane	2.48E-03
17	GO:0009707: chloroplast outer membrane	3.20E-03
18	GO:0009706: chloroplast inner membrane	6.99E-03
19	GO:0031969: chloroplast membrane	1.62E-02
20	GO:0048046: apoplast	2.83E-02
21	GO:0005777: peroxisome	3.55E-02
22	GO:0009534: chloroplast thylakoid	3.69E-02
23	GO:0005622: intracellular	4.85E-02