GO Enrichment Analysis of Co-expressed Genes with
AT4G24560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 2 | GO:0048219: inter-Golgi cisterna vesicle-mediated transport | 0.00E+00 |
| 3 | GO:0071578: zinc II ion transmembrane import | 0.00E+00 |
| 4 | GO:0048015: phosphatidylinositol-mediated signaling | 8.26E-07 |
| 5 | GO:0055046: microgametogenesis | 1.57E-05 |
| 6 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 1.77E-05 |
| 7 | GO:0046488: phosphatidylinositol metabolic process | 4.61E-05 |
| 8 | GO:0050994: regulation of lipid catabolic process | 4.61E-05 |
| 9 | GO:0010498: proteasomal protein catabolic process | 8.18E-05 |
| 10 | GO:2001289: lipid X metabolic process | 1.23E-04 |
| 11 | GO:0070301: cellular response to hydrogen peroxide | 1.23E-04 |
| 12 | GO:0072334: UDP-galactose transmembrane transport | 1.23E-04 |
| 13 | GO:0010104: regulation of ethylene-activated signaling pathway | 1.23E-04 |
| 14 | GO:0061088: regulation of sequestering of zinc ion | 1.69E-04 |
| 15 | GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly | 1.69E-04 |
| 16 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 2.72E-04 |
| 17 | GO:0043966: histone H3 acetylation | 3.27E-04 |
| 18 | GO:0006355: regulation of transcription, DNA-templated | 4.75E-04 |
| 19 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 6.32E-04 |
| 20 | GO:0010629: negative regulation of gene expression | 6.99E-04 |
| 21 | GO:0072593: reactive oxygen species metabolic process | 7.68E-04 |
| 22 | GO:0006352: DNA-templated transcription, initiation | 7.68E-04 |
| 23 | GO:0071365: cellular response to auxin stimulus | 8.38E-04 |
| 24 | GO:0046854: phosphatidylinositol phosphorylation | 1.06E-03 |
| 25 | GO:0071215: cellular response to abscisic acid stimulus | 1.54E-03 |
| 26 | GO:0009561: megagametogenesis | 1.63E-03 |
| 27 | GO:0042631: cellular response to water deprivation | 1.81E-03 |
| 28 | GO:0006351: transcription, DNA-templated | 2.07E-03 |
| 29 | GO:0010583: response to cyclopentenone | 2.29E-03 |
| 30 | GO:0010029: regulation of seed germination | 2.91E-03 |
| 31 | GO:0048573: photoperiodism, flowering | 3.13E-03 |
| 32 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.13E-03 |
| 33 | GO:0010043: response to zinc ion | 3.70E-03 |
| 34 | GO:0009867: jasmonic acid mediated signaling pathway | 3.94E-03 |
| 35 | GO:0006897: endocytosis | 4.43E-03 |
| 36 | GO:0000209: protein polyubiquitination | 4.81E-03 |
| 37 | GO:0009644: response to high light intensity | 4.94E-03 |
| 38 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 5.34E-03 |
| 39 | GO:0006812: cation transport | 5.48E-03 |
| 40 | GO:0042538: hyperosmotic salinity response | 5.48E-03 |
| 41 | GO:0009736: cytokinin-activated signaling pathway | 5.75E-03 |
| 42 | GO:0009626: plant-type hypersensitive response | 6.74E-03 |
| 43 | GO:0016569: covalent chromatin modification | 7.04E-03 |
| 44 | GO:0051726: regulation of cell cycle | 7.64E-03 |
| 45 | GO:0009733: response to auxin | 9.32E-03 |
| 46 | GO:0006413: translational initiation | 1.02E-02 |
| 47 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.16E-02 |
| 48 | GO:0006470: protein dephosphorylation | 1.18E-02 |
| 49 | GO:0007166: cell surface receptor signaling pathway | 1.18E-02 |
| 50 | GO:0006970: response to osmotic stress | 1.54E-02 |
| 51 | GO:0048366: leaf development | 1.64E-02 |
| 52 | GO:0045454: cell redox homeostasis | 1.94E-02 |
| 53 | GO:0006886: intracellular protein transport | 1.98E-02 |
| 54 | GO:0009408: response to heat | 2.25E-02 |
| 55 | GO:0009734: auxin-activated signaling pathway | 2.87E-02 |
| 56 | GO:0045893: positive regulation of transcription, DNA-templated | 3.74E-02 |
| 57 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.21E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 3 | GO:0001102: RNA polymerase II activating transcription factor binding | 1.77E-05 |
| 4 | GO:0016274: protein-arginine N-methyltransferase activity | 1.77E-05 |
| 5 | GO:0016303: 1-phosphatidylinositol-3-kinase activity | 1.77E-05 |
| 6 | GO:0004112: cyclic-nucleotide phosphodiesterase activity | 1.77E-05 |
| 7 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.77E-05 |
| 8 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 8.18E-05 |
| 9 | GO:0070628: proteasome binding | 1.69E-04 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.69E-04 |
| 11 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.19E-04 |
| 12 | GO:0015562: efflux transmembrane transporter activity | 2.72E-04 |
| 13 | GO:0042578: phosphoric ester hydrolase activity | 2.72E-04 |
| 14 | GO:0043565: sequence-specific DNA binding | 3.33E-04 |
| 15 | GO:0017025: TBP-class protein binding | 1.06E-03 |
| 16 | GO:0005385: zinc ion transmembrane transporter activity | 1.21E-03 |
| 17 | GO:0046982: protein heterodimerization activity | 1.28E-03 |
| 18 | GO:0008324: cation transmembrane transporter activity | 1.29E-03 |
| 19 | GO:0061630: ubiquitin protein ligase activity | 1.68E-03 |
| 20 | GO:0004402: histone acetyltransferase activity | 1.81E-03 |
| 21 | GO:0001085: RNA polymerase II transcription factor binding | 1.90E-03 |
| 22 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.96E-03 |
| 23 | GO:0010181: FMN binding | 2.00E-03 |
| 24 | GO:0003677: DNA binding | 2.75E-03 |
| 25 | GO:0030247: polysaccharide binding | 3.13E-03 |
| 26 | GO:0004222: metalloendopeptidase activity | 3.59E-03 |
| 27 | GO:0016887: ATPase activity | 3.60E-03 |
| 28 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.70E-03 |
| 29 | GO:0008270: zinc ion binding | 5.55E-03 |
| 30 | GO:0005515: protein binding | 9.27E-03 |
| 31 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 9.39E-03 |
| 32 | GO:0004842: ubiquitin-protein transferase activity | 1.15E-02 |
| 33 | GO:0003743: translation initiation factor activity | 1.20E-02 |
| 34 | GO:0003682: chromatin binding | 1.52E-02 |
| 35 | GO:0004722: protein serine/threonine phosphatase activity | 2.07E-02 |
| 36 | GO:0003924: GTPase activity | 2.25E-02 |
| 37 | GO:0005516: calmodulin binding | 4.53E-02 |
| 38 | GO:0005525: GTP binding | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005942: phosphatidylinositol 3-kinase complex | 0.00E+00 |
| 2 | GO:0000124: SAGA complex | 4.61E-05 |
| 3 | GO:0005798: Golgi-associated vesicle | 2.72E-04 |
| 4 | GO:0030127: COPII vesicle coat | 2.72E-04 |
| 5 | GO:0030173: integral component of Golgi membrane | 3.27E-04 |
| 6 | GO:0005669: transcription factor TFIID complex | 4.43E-04 |
| 7 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.06E-03 |
| 8 | GO:0005795: Golgi stack | 1.06E-03 |
| 9 | GO:0005839: proteasome core complex | 1.37E-03 |
| 10 | GO:0005667: transcription factor complex | 3.02E-03 |
| 11 | GO:0000151: ubiquitin ligase complex | 3.36E-03 |
| 12 | GO:0000786: nucleosome | 3.82E-03 |
| 13 | GO:0005623: cell | 8.74E-03 |
| 14 | GO:0000139: Golgi membrane | 1.13E-02 |
| 15 | GO:0005789: endoplasmic reticulum membrane | 1.27E-02 |
| 16 | GO:0005634: nucleus | 1.92E-02 |
| 17 | GO:0005886: plasma membrane | 2.65E-02 |
| 18 | GO:0005777: peroxisome | 3.74E-02 |
| 19 | GO:0005794: Golgi apparatus | 4.37E-02 |
| 20 | GO:0005802: trans-Golgi network | 4.74E-02 |