co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G23900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0008153: para-aminobenzoic acid biosynthetic process	6.06E-06
2	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.65E-05
3	GO:0046417: chorismate metabolic process	3.04E-05
4	GO:0006000: fructose metabolic process	3.04E-05
5	GO:0043572: plastid fission	4.72E-05
6	GO:0046656: folic acid biosynthetic process	6.61E-05
7	GO:0010236: plastoquinone biosynthetic process	8.72E-05
8	GO:0046654: tetrahydrofolate biosynthetic process	1.34E-04
9	GO:0016559: peroxisome fission	1.86E-04
10	GO:0006002: fructose 6-phosphate metabolic process	2.14E-04
11	GO:0009657: plastid organization	2.14E-04
12	GO:0000902: cell morphogenesis	2.43E-04
13	GO:0019684: photosynthesis, light reaction	3.33E-04
14	GO:0006415: translational termination	3.33E-04
15	GO:0006094: gluconeogenesis	3.97E-04
16	GO:0009767: photosynthetic electron transport chain	3.97E-04
17	GO:0005986: sucrose biosynthetic process	3.97E-04
18	GO:0006541: glutamine metabolic process	4.30E-04
19	GO:0010020: chloroplast fission	4.30E-04
20	GO:0019253: reductive pentose-phosphate cycle	4.30E-04
21	GO:0007031: peroxisome organization	4.64E-04
22	GO:0080092: regulation of pollen tube growth	6.40E-04
23	GO:0016117: carotenoid biosynthetic process	7.52E-04
24	GO:0019252: starch biosynthetic process	9.08E-04
25	GO:0009607: response to biotic stimulus	1.25E-03
26	GO:0000160: phosphorelay signal transduction system	1.47E-03
27	GO:0016051: carbohydrate biosynthetic process	1.67E-03
28	GO:0009736: cytokinin-activated signaling pathway	2.41E-03
29	GO:0006396: RNA processing	3.12E-03
30	GO:0046686: response to cadmium ion	3.54E-03
31	GO:0006633: fatty acid biosynthetic process	4.16E-03
32	GO:0009739: response to gibberellin	4.79E-03
33	GO:0009793: embryo development ending in seed dormancy	5.24E-03
34	GO:0009658: chloroplast organization	5.98E-03
35	GO:0009860: pollen tube growth	6.30E-03
36	GO:0009723: response to ethylene	6.61E-03
37	GO:0045454: cell redox homeostasis	7.87E-03
38	GO:0009751: response to salicylic acid	9.02E-03
39	GO:0009753: response to jasmonic acid	9.57E-03
40	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.11E-02
41	GO:0009416: response to light stimulus	1.37E-02
42	GO:0042742: defense response to bacterium	2.25E-02
43	GO:0030154: cell differentiation	2.40E-02
44	GO:0009733: response to auxin	2.45E-02
45	GO:0006810: transport	2.97E-02
46	GO:0005975: carbohydrate metabolic process	3.04E-02

Rank	GO Term	Adjusted P value
1	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
2	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
3	GO:0046820: 4-amino-4-deoxychorismate synthase activity	0.00E+00
4	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.65E-05
5	GO:0004148: dihydrolipoyl dehydrogenase activity	3.04E-05
6	GO:0016149: translation release factor activity, codon specific	4.72E-05
7	GO:0080030: methyl indole-3-acetate esterase activity	1.10E-04
8	GO:0042578: phosphoric ester hydrolase activity	1.10E-04
9	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.34E-04
10	GO:0003747: translation release factor activity	2.43E-04
11	GO:0042802: identical protein binding	3.08E-04
12	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.33E-04
13	GO:0004176: ATP-dependent peptidase activity	6.04E-04
14	GO:0000156: phosphorelay response regulator activity	1.03E-03
15	GO:0008237: metallopeptidase activity	1.12E-03
16	GO:0004222: metalloendopeptidase activity	1.52E-03
17	GO:0050897: cobalt ion binding	1.57E-03
18	GO:0005198: structural molecule activity	2.14E-03
19	GO:0016788: hydrolase activity, acting on ester bonds	6.06E-03
20	GO:0005515: protein binding	6.54E-03
21	GO:0050660: flavin adenine dinucleotide binding	6.61E-03
22	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	7.87E-03
23	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	8.48E-03
24	GO:0016887: ATPase activity	1.24E-02
25	GO:0005507: copper ion binding	1.75E-02
26	GO:0019825: oxygen binding	1.75E-02
27	GO:0005509: calcium ion binding	2.13E-02
28	GO:0044212: transcription regulatory region DNA binding	2.25E-02
29	GO:0016787: hydrolase activity	3.89E-02

Rank	GO Term	Adjusted P value
1	GO:0009344: nitrite reductase complex [NAD(P)H]	6.06E-06
2	GO:0009507: chloroplast	6.93E-06
3	GO:0005779: integral component of peroxisomal membrane	2.14E-04
4	GO:0016324: apical plasma membrane	3.02E-04
5	GO:0030095: chloroplast photosystem II	4.30E-04
6	GO:0009654: photosystem II oxygen evolving complex	5.68E-04
7	GO:0019898: extrinsic component of membrane	9.08E-04
8	GO:0005778: peroxisomal membrane	1.12E-03
9	GO:0009941: chloroplast envelope	1.51E-03
10	GO:0009570: chloroplast stroma	2.30E-03
11	GO:0005747: mitochondrial respiratory chain complex I	2.76E-03
12	GO:0009706: chloroplast inner membrane	3.06E-03
13	GO:0009543: chloroplast thylakoid lumen	3.56E-03
14	GO:0005759: mitochondrial matrix	4.16E-03
15	GO:0048046: apoplast	8.22E-03
16	GO:0005777: peroxisome	1.51E-02
17	GO:0009579: thylakoid	1.55E-02
18	GO:0009534: chloroplast thylakoid	1.56E-02
19	GO:0005802: trans-Golgi network	1.91E-02
20	GO:0005768: endosome	2.09E-02
21	GO:0009536: plastid	2.61E-02
22	GO:0000139: Golgi membrane	2.80E-02
23	GO:0009535: chloroplast thylakoid membrane	4.01E-02