GO Enrichment Analysis of Co-expressed Genes with
AT4G22890
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 2.26E-06 |
| 5 | GO:0009642: response to light intensity | 5.09E-05 |
| 6 | GO:1904964: positive regulation of phytol biosynthetic process | 9.33E-05 |
| 7 | GO:0065002: intracellular protein transmembrane transport | 9.33E-05 |
| 8 | GO:0043953: protein transport by the Tat complex | 9.33E-05 |
| 9 | GO:1904966: positive regulation of vitamin E biosynthetic process | 9.33E-05 |
| 10 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.20E-04 |
| 11 | GO:0080005: photosystem stoichiometry adjustment | 2.20E-04 |
| 12 | GO:0016050: vesicle organization | 3.67E-04 |
| 13 | GO:1902448: positive regulation of shade avoidance | 3.67E-04 |
| 14 | GO:0006954: inflammatory response | 3.67E-04 |
| 15 | GO:0010371: regulation of gibberellin biosynthetic process | 5.28E-04 |
| 16 | GO:0071484: cellular response to light intensity | 5.28E-04 |
| 17 | GO:0080170: hydrogen peroxide transmembrane transport | 5.28E-04 |
| 18 | GO:0010021: amylopectin biosynthetic process | 7.02E-04 |
| 19 | GO:0009765: photosynthesis, light harvesting | 7.02E-04 |
| 20 | GO:0006109: regulation of carbohydrate metabolic process | 7.02E-04 |
| 21 | GO:0045727: positive regulation of translation | 7.02E-04 |
| 22 | GO:0015994: chlorophyll metabolic process | 7.02E-04 |
| 23 | GO:0010117: photoprotection | 8.88E-04 |
| 24 | GO:0010027: thylakoid membrane organization | 1.01E-03 |
| 25 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.08E-03 |
| 26 | GO:0016554: cytidine to uridine editing | 1.08E-03 |
| 27 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.08E-03 |
| 28 | GO:0007166: cell surface receptor signaling pathway | 1.10E-03 |
| 29 | GO:0018298: protein-chromophore linkage | 1.30E-03 |
| 30 | GO:0009395: phospholipid catabolic process | 1.51E-03 |
| 31 | GO:0010444: guard mother cell differentiation | 1.51E-03 |
| 32 | GO:0030091: protein repair | 1.75E-03 |
| 33 | GO:0055085: transmembrane transport | 1.99E-03 |
| 34 | GO:0032544: plastid translation | 2.00E-03 |
| 35 | GO:0055114: oxidation-reduction process | 2.02E-03 |
| 36 | GO:0009644: response to high light intensity | 2.27E-03 |
| 37 | GO:0015979: photosynthesis | 2.49E-03 |
| 38 | GO:0010205: photoinhibition | 2.52E-03 |
| 39 | GO:1900865: chloroplast RNA modification | 2.52E-03 |
| 40 | GO:0006364: rRNA processing | 2.82E-03 |
| 41 | GO:0008285: negative regulation of cell proliferation | 3.09E-03 |
| 42 | GO:0043085: positive regulation of catalytic activity | 3.09E-03 |
| 43 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.38E-03 |
| 44 | GO:0006094: gluconeogenesis | 3.69E-03 |
| 45 | GO:0010628: positive regulation of gene expression | 3.69E-03 |
| 46 | GO:0010207: photosystem II assembly | 4.01E-03 |
| 47 | GO:0071732: cellular response to nitric oxide | 4.33E-03 |
| 48 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.67E-03 |
| 49 | GO:0009833: plant-type primary cell wall biogenesis | 4.67E-03 |
| 50 | GO:0006833: water transport | 4.67E-03 |
| 51 | GO:0010025: wax biosynthetic process | 4.67E-03 |
| 52 | GO:0010073: meristem maintenance | 5.36E-03 |
| 53 | GO:0008299: isoprenoid biosynthetic process | 5.36E-03 |
| 54 | GO:0035428: hexose transmembrane transport | 6.09E-03 |
| 55 | GO:0009735: response to cytokinin | 6.36E-03 |
| 56 | GO:0071369: cellular response to ethylene stimulus | 6.47E-03 |
| 57 | GO:0010227: floral organ abscission | 6.47E-03 |
| 58 | GO:0042127: regulation of cell proliferation | 6.85E-03 |
| 59 | GO:0007623: circadian rhythm | 6.88E-03 |
| 60 | GO:0034220: ion transmembrane transport | 7.65E-03 |
| 61 | GO:0006662: glycerol ether metabolic process | 8.06E-03 |
| 62 | GO:0046323: glucose import | 8.06E-03 |
| 63 | GO:0019252: starch biosynthetic process | 8.90E-03 |
| 64 | GO:0016032: viral process | 9.78E-03 |
| 65 | GO:0071281: cellular response to iron ion | 1.02E-02 |
| 66 | GO:0009567: double fertilization forming a zygote and endosperm | 1.07E-02 |
| 67 | GO:0071805: potassium ion transmembrane transport | 1.11E-02 |
| 68 | GO:0016126: sterol biosynthetic process | 1.21E-02 |
| 69 | GO:0030244: cellulose biosynthetic process | 1.46E-02 |
| 70 | GO:0000160: phosphorelay signal transduction system | 1.51E-02 |
| 71 | GO:0006811: ion transport | 1.56E-02 |
| 72 | GO:0006869: lipid transport | 1.74E-02 |
| 73 | GO:0034599: cellular response to oxidative stress | 1.78E-02 |
| 74 | GO:0032259: methylation | 1.87E-02 |
| 75 | GO:0051707: response to other organism | 2.07E-02 |
| 76 | GO:0009640: photomorphogenesis | 2.07E-02 |
| 77 | GO:0006813: potassium ion transport | 2.55E-02 |
| 78 | GO:0009736: cytokinin-activated signaling pathway | 2.55E-02 |
| 79 | GO:0006857: oligopeptide transport | 2.68E-02 |
| 80 | GO:0006096: glycolytic process | 2.88E-02 |
| 81 | GO:0043086: negative regulation of catalytic activity | 2.88E-02 |
| 82 | GO:0048316: seed development | 2.94E-02 |
| 83 | GO:0005975: carbohydrate metabolic process | 2.95E-02 |
| 84 | GO:0051726: regulation of cell cycle | 3.42E-02 |
| 85 | GO:0009742: brassinosteroid mediated signaling pathway | 3.42E-02 |
| 86 | GO:0006633: fatty acid biosynthetic process | 4.53E-02 |
| 87 | GO:0010228: vegetative to reproductive phase transition of meristem | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 2 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 4 | GO:0035671: enone reductase activity | 9.33E-05 |
| 5 | GO:0045485: omega-6 fatty acid desaturase activity | 9.33E-05 |
| 6 | GO:0047746: chlorophyllase activity | 2.20E-04 |
| 7 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.20E-04 |
| 8 | GO:0033201: alpha-1,4-glucan synthase activity | 2.20E-04 |
| 9 | GO:0018708: thiol S-methyltransferase activity | 2.20E-04 |
| 10 | GO:0070402: NADPH binding | 3.67E-04 |
| 11 | GO:0004373: glycogen (starch) synthase activity | 3.67E-04 |
| 12 | GO:0022891: substrate-specific transmembrane transporter activity | 4.25E-04 |
| 13 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 5.28E-04 |
| 14 | GO:0019201: nucleotide kinase activity | 5.28E-04 |
| 15 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 7.02E-04 |
| 16 | GO:0004506: squalene monooxygenase activity | 7.02E-04 |
| 17 | GO:0043495: protein anchor | 7.02E-04 |
| 18 | GO:0009011: starch synthase activity | 7.02E-04 |
| 19 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.59E-04 |
| 20 | GO:0016168: chlorophyll binding | 1.07E-03 |
| 21 | GO:0004332: fructose-bisphosphate aldolase activity | 1.08E-03 |
| 22 | GO:0000293: ferric-chelate reductase activity | 1.08E-03 |
| 23 | GO:0035673: oligopeptide transmembrane transporter activity | 1.08E-03 |
| 24 | GO:0042578: phosphoric ester hydrolase activity | 1.08E-03 |
| 25 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.29E-03 |
| 26 | GO:0004017: adenylate kinase activity | 1.29E-03 |
| 27 | GO:0019899: enzyme binding | 1.51E-03 |
| 28 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.25E-03 |
| 29 | GO:0008047: enzyme activator activity | 2.80E-03 |
| 30 | GO:0015198: oligopeptide transporter activity | 3.38E-03 |
| 31 | GO:0004565: beta-galactosidase activity | 3.69E-03 |
| 32 | GO:0008266: poly(U) RNA binding | 4.01E-03 |
| 33 | GO:0004857: enzyme inhibitor activity | 5.01E-03 |
| 34 | GO:0015079: potassium ion transmembrane transporter activity | 5.36E-03 |
| 35 | GO:0004176: ATP-dependent peptidase activity | 5.72E-03 |
| 36 | GO:0016491: oxidoreductase activity | 6.14E-03 |
| 37 | GO:0016760: cellulose synthase (UDP-forming) activity | 6.47E-03 |
| 38 | GO:0047134: protein-disulfide reductase activity | 7.25E-03 |
| 39 | GO:0004791: thioredoxin-disulfide reductase activity | 8.47E-03 |
| 40 | GO:0016853: isomerase activity | 8.47E-03 |
| 41 | GO:0005355: glucose transmembrane transporter activity | 8.47E-03 |
| 42 | GO:0050662: coenzyme binding | 8.47E-03 |
| 43 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 8.74E-03 |
| 44 | GO:0019901: protein kinase binding | 8.90E-03 |
| 45 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.02E-02 |
| 46 | GO:0000156: phosphorelay response regulator activity | 1.02E-02 |
| 47 | GO:0008168: methyltransferase activity | 1.03E-02 |
| 48 | GO:0016759: cellulose synthase activity | 1.07E-02 |
| 49 | GO:0016788: hydrolase activity, acting on ester bonds | 1.09E-02 |
| 50 | GO:0015250: water channel activity | 1.21E-02 |
| 51 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.56E-02 |
| 52 | GO:0030145: manganese ion binding | 1.62E-02 |
| 53 | GO:0003746: translation elongation factor activity | 1.73E-02 |
| 54 | GO:0003993: acid phosphatase activity | 1.78E-02 |
| 55 | GO:0003824: catalytic activity | 1.96E-02 |
| 56 | GO:0009055: electron carrier activity | 2.10E-02 |
| 57 | GO:0005198: structural molecule activity | 2.24E-02 |
| 58 | GO:0031625: ubiquitin protein ligase binding | 2.75E-02 |
| 59 | GO:0015035: protein disulfide oxidoreductase activity | 3.35E-02 |
| 60 | GO:0016746: transferase activity, transferring acyl groups | 3.35E-02 |
| 61 | GO:0019843: rRNA binding | 3.85E-02 |
| 62 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.93E-02 |
| 63 | GO:0015144: carbohydrate transmembrane transporter activity | 4.38E-02 |
| 64 | GO:0016787: hydrolase activity | 4.50E-02 |
| 65 | GO:0005351: sugar:proton symporter activity | 4.76E-02 |
| 66 | GO:0019825: oxygen binding | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 5.00E-28 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.88E-16 |
| 4 | GO:0009534: chloroplast thylakoid | 2.99E-15 |
| 5 | GO:0009941: chloroplast envelope | 1.75E-11 |
| 6 | GO:0009570: chloroplast stroma | 1.94E-08 |
| 7 | GO:0010287: plastoglobule | 8.72E-08 |
| 8 | GO:0009579: thylakoid | 5.09E-05 |
| 9 | GO:0031361: integral component of thylakoid membrane | 9.33E-05 |
| 10 | GO:0033281: TAT protein transport complex | 3.67E-04 |
| 11 | GO:0009523: photosystem II | 6.66E-04 |
| 12 | GO:0009501: amyloplast | 1.75E-03 |
| 13 | GO:0031969: chloroplast membrane | 2.11E-03 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.25E-03 |
| 15 | GO:0009508: plastid chromosome | 3.69E-03 |
| 16 | GO:0009706: chloroplast inner membrane | 3.99E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 5.36E-03 |
| 18 | GO:0042651: thylakoid membrane | 5.36E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 8.90E-03 |
| 20 | GO:0010319: stromule | 1.11E-02 |
| 21 | GO:0009295: nucleoid | 1.11E-02 |
| 22 | GO:0031977: thylakoid lumen | 1.95E-02 |
| 23 | GO:0016020: membrane | 2.19E-02 |
| 24 | GO:0016021: integral component of membrane | 2.41E-02 |
| 25 | GO:0005887: integral component of plasma membrane | 2.66E-02 |
| 26 | GO:0009543: chloroplast thylakoid lumen | 3.85E-02 |
| 27 | GO:0005623: cell | 3.93E-02 |