GO Enrichment Analysis of Co-expressed Genes with
AT4G22670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 2 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 4 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 5 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 6 | GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation | 0.00E+00 |
| 7 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 8 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 9 | GO:0071433: cell wall repair | 0.00E+00 |
| 10 | GO:0006457: protein folding | 1.45E-07 |
| 11 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 7.51E-07 |
| 12 | GO:0006626: protein targeting to mitochondrion | 6.82E-06 |
| 13 | GO:0000027: ribosomal large subunit assembly | 1.50E-05 |
| 14 | GO:0006379: mRNA cleavage | 1.20E-04 |
| 15 | GO:0006422: aspartyl-tRNA aminoacylation | 1.22E-04 |
| 16 | GO:2000232: regulation of rRNA processing | 1.22E-04 |
| 17 | GO:0031120: snRNA pseudouridine synthesis | 1.22E-04 |
| 18 | GO:0031118: rRNA pseudouridine synthesis | 1.22E-04 |
| 19 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 1.22E-04 |
| 20 | GO:0046686: response to cadmium ion | 2.32E-04 |
| 21 | GO:1905182: positive regulation of urease activity | 2.82E-04 |
| 22 | GO:0080181: lateral root branching | 2.82E-04 |
| 23 | GO:0051258: protein polymerization | 2.82E-04 |
| 24 | GO:0051252: regulation of RNA metabolic process | 2.82E-04 |
| 25 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 2.82E-04 |
| 26 | GO:0002221: pattern recognition receptor signaling pathway | 2.82E-04 |
| 27 | GO:0031204: posttranslational protein targeting to membrane, translocation | 2.82E-04 |
| 28 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 2.82E-04 |
| 29 | GO:0034976: response to endoplasmic reticulum stress | 3.77E-04 |
| 30 | GO:0030150: protein import into mitochondrial matrix | 4.18E-04 |
| 31 | GO:0045039: protein import into mitochondrial inner membrane | 4.65E-04 |
| 32 | GO:0015695: organic cation transport | 4.65E-04 |
| 33 | GO:0055074: calcium ion homeostasis | 4.65E-04 |
| 34 | GO:1902626: assembly of large subunit precursor of preribosome | 4.65E-04 |
| 35 | GO:0010359: regulation of anion channel activity | 4.65E-04 |
| 36 | GO:0007276: gamete generation | 6.66E-04 |
| 37 | GO:0006164: purine nucleotide biosynthetic process | 6.66E-04 |
| 38 | GO:0009113: purine nucleobase biosynthetic process | 6.66E-04 |
| 39 | GO:0015696: ammonium transport | 6.66E-04 |
| 40 | GO:0006168: adenine salvage | 6.66E-04 |
| 41 | GO:0001676: long-chain fatty acid metabolic process | 6.66E-04 |
| 42 | GO:0006166: purine ribonucleoside salvage | 6.66E-04 |
| 43 | GO:0045454: cell redox homeostasis | 7.40E-04 |
| 44 | GO:0006662: glycerol ether metabolic process | 8.17E-04 |
| 45 | GO:0010197: polar nucleus fusion | 8.17E-04 |
| 46 | GO:0072488: ammonium transmembrane transport | 8.84E-04 |
| 47 | GO:0000460: maturation of 5.8S rRNA | 8.84E-04 |
| 48 | GO:0044205: 'de novo' UMP biosynthetic process | 8.84E-04 |
| 49 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 8.84E-04 |
| 50 | GO:0010188: response to microbial phytotoxin | 8.84E-04 |
| 51 | GO:0080142: regulation of salicylic acid biosynthetic process | 8.84E-04 |
| 52 | GO:0009408: response to heat | 1.01E-03 |
| 53 | GO:0044209: AMP salvage | 1.12E-03 |
| 54 | GO:0045116: protein neddylation | 1.12E-03 |
| 55 | GO:0046283: anthocyanin-containing compound metabolic process | 1.12E-03 |
| 56 | GO:0000470: maturation of LSU-rRNA | 1.37E-03 |
| 57 | GO:0045040: protein import into mitochondrial outer membrane | 1.37E-03 |
| 58 | GO:0000741: karyogamy | 1.37E-03 |
| 59 | GO:0006354: DNA-templated transcription, elongation | 1.37E-03 |
| 60 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.64E-03 |
| 61 | GO:0006694: steroid biosynthetic process | 1.64E-03 |
| 62 | GO:0006950: response to stress | 1.67E-03 |
| 63 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.92E-03 |
| 64 | GO:0006499: N-terminal protein myristoylation | 2.03E-03 |
| 65 | GO:0009690: cytokinin metabolic process | 2.22E-03 |
| 66 | GO:0006605: protein targeting | 2.22E-03 |
| 67 | GO:0006102: isocitrate metabolic process | 2.22E-03 |
| 68 | GO:0045087: innate immune response | 2.33E-03 |
| 69 | GO:0006099: tricarboxylic acid cycle | 2.43E-03 |
| 70 | GO:0034599: cellular response to oxidative stress | 2.43E-03 |
| 71 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.54E-03 |
| 72 | GO:0015031: protein transport | 2.59E-03 |
| 73 | GO:0007338: single fertilization | 2.87E-03 |
| 74 | GO:0046685: response to arsenic-containing substance | 2.87E-03 |
| 75 | GO:0006189: 'de novo' IMP biosynthetic process | 2.87E-03 |
| 76 | GO:0043067: regulation of programmed cell death | 3.21E-03 |
| 77 | GO:0010162: seed dormancy process | 3.57E-03 |
| 78 | GO:0000103: sulfate assimilation | 3.57E-03 |
| 79 | GO:0006032: chitin catabolic process | 3.57E-03 |
| 80 | GO:0072593: reactive oxygen species metabolic process | 3.94E-03 |
| 81 | GO:0043085: positive regulation of catalytic activity | 3.94E-03 |
| 82 | GO:0006820: anion transport | 4.32E-03 |
| 83 | GO:0016925: protein sumoylation | 4.32E-03 |
| 84 | GO:0071365: cellular response to auxin stimulus | 4.32E-03 |
| 85 | GO:0006886: intracellular protein transport | 4.34E-03 |
| 86 | GO:0006807: nitrogen compound metabolic process | 4.71E-03 |
| 87 | GO:0048467: gynoecium development | 5.12E-03 |
| 88 | GO:0009553: embryo sac development | 5.54E-03 |
| 89 | GO:0080188: RNA-directed DNA methylation | 5.54E-03 |
| 90 | GO:0018105: peptidyl-serine phosphorylation | 5.87E-03 |
| 91 | GO:0000162: tryptophan biosynthetic process | 5.98E-03 |
| 92 | GO:0009116: nucleoside metabolic process | 6.42E-03 |
| 93 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.42E-03 |
| 94 | GO:0010187: negative regulation of seed germination | 6.42E-03 |
| 95 | GO:0051302: regulation of cell division | 6.87E-03 |
| 96 | GO:0006334: nucleosome assembly | 7.34E-03 |
| 97 | GO:0016998: cell wall macromolecule catabolic process | 7.34E-03 |
| 98 | GO:0015992: proton transport | 7.34E-03 |
| 99 | GO:0007131: reciprocal meiotic recombination | 7.81E-03 |
| 100 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.81E-03 |
| 101 | GO:0007005: mitochondrion organization | 7.81E-03 |
| 102 | GO:0009294: DNA mediated transformation | 8.30E-03 |
| 103 | GO:0009734: auxin-activated signaling pathway | 8.41E-03 |
| 104 | GO:0006413: translational initiation | 9.19E-03 |
| 105 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 9.31E-03 |
| 106 | GO:0042391: regulation of membrane potential | 9.83E-03 |
| 107 | GO:0008033: tRNA processing | 9.83E-03 |
| 108 | GO:0034220: ion transmembrane transport | 9.83E-03 |
| 109 | GO:0009735: response to cytokinin | 1.01E-02 |
| 110 | GO:0006520: cellular amino acid metabolic process | 1.04E-02 |
| 111 | GO:0050832: defense response to fungus | 1.14E-02 |
| 112 | GO:0006623: protein targeting to vacuole | 1.15E-02 |
| 113 | GO:0010193: response to ozone | 1.20E-02 |
| 114 | GO:0030163: protein catabolic process | 1.32E-02 |
| 115 | GO:0009567: double fertilization forming a zygote and endosperm | 1.38E-02 |
| 116 | GO:0010252: auxin homeostasis | 1.38E-02 |
| 117 | GO:0009651: response to salt stress | 1.40E-02 |
| 118 | GO:0042254: ribosome biogenesis | 1.56E-02 |
| 119 | GO:0009615: response to virus | 1.56E-02 |
| 120 | GO:0016049: cell growth | 1.82E-02 |
| 121 | GO:0080167: response to karrikin | 1.90E-02 |
| 122 | GO:0010311: lateral root formation | 1.95E-02 |
| 123 | GO:0016192: vesicle-mediated transport | 2.00E-02 |
| 124 | GO:0006811: ion transport | 2.02E-02 |
| 125 | GO:0046777: protein autophosphorylation | 2.03E-02 |
| 126 | GO:0048527: lateral root development | 2.09E-02 |
| 127 | GO:0010119: regulation of stomatal movement | 2.09E-02 |
| 128 | GO:0010043: response to zinc ion | 2.09E-02 |
| 129 | GO:0009867: jasmonic acid mediated signaling pathway | 2.23E-02 |
| 130 | GO:0006631: fatty acid metabolic process | 2.52E-02 |
| 131 | GO:0042742: defense response to bacterium | 2.75E-02 |
| 132 | GO:0042546: cell wall biogenesis | 2.75E-02 |
| 133 | GO:0000154: rRNA modification | 2.90E-02 |
| 134 | GO:0009965: leaf morphogenesis | 2.90E-02 |
| 135 | GO:0006364: rRNA processing | 3.30E-02 |
| 136 | GO:0009909: regulation of flower development | 3.55E-02 |
| 137 | GO:0048316: seed development | 3.80E-02 |
| 138 | GO:0009626: plant-type hypersensitive response | 3.89E-02 |
| 139 | GO:0009624: response to nematode | 4.24E-02 |
| 140 | GO:0006396: RNA processing | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 3 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 4 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 5 | GO:0000166: nucleotide binding | 7.22E-07 |
| 6 | GO:0043021: ribonucleoprotein complex binding | 7.51E-07 |
| 7 | GO:0051082: unfolded protein binding | 4.27E-06 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.69E-06 |
| 9 | GO:0004815: aspartate-tRNA ligase activity | 1.22E-04 |
| 10 | GO:0048037: cofactor binding | 1.22E-04 |
| 11 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.82E-04 |
| 12 | GO:0016743: carboxyl- or carbamoyltransferase activity | 2.82E-04 |
| 13 | GO:0008428: ribonuclease inhibitor activity | 2.82E-04 |
| 14 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 2.82E-04 |
| 15 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 2.82E-04 |
| 16 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 2.82E-04 |
| 17 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.82E-04 |
| 18 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 2.82E-04 |
| 19 | GO:0019781: NEDD8 activating enzyme activity | 2.82E-04 |
| 20 | GO:0005509: calcium ion binding | 3.35E-04 |
| 21 | GO:0016151: nickel cation binding | 4.65E-04 |
| 22 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 4.65E-04 |
| 23 | GO:0004557: alpha-galactosidase activity | 4.65E-04 |
| 24 | GO:0052692: raffinose alpha-galactosidase activity | 4.65E-04 |
| 25 | GO:0008469: histone-arginine N-methyltransferase activity | 4.65E-04 |
| 26 | GO:0003756: protein disulfide isomerase activity | 6.53E-04 |
| 27 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 6.66E-04 |
| 28 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 6.66E-04 |
| 29 | GO:0003999: adenine phosphoribosyltransferase activity | 6.66E-04 |
| 30 | GO:0047134: protein-disulfide reductase activity | 7.05E-04 |
| 31 | GO:0004791: thioredoxin-disulfide reductase activity | 8.75E-04 |
| 32 | GO:0005086: ARF guanyl-nucleotide exchange factor activity | 8.84E-04 |
| 33 | GO:0004834: tryptophan synthase activity | 8.84E-04 |
| 34 | GO:0008641: small protein activating enzyme activity | 1.12E-03 |
| 35 | GO:0008948: oxaloacetate decarboxylase activity | 1.12E-03 |
| 36 | GO:0031386: protein tag | 1.12E-03 |
| 37 | GO:0002020: protease binding | 1.12E-03 |
| 38 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.13E-03 |
| 39 | GO:0008565: protein transporter activity | 1.22E-03 |
| 40 | GO:0031369: translation initiation factor binding | 1.37E-03 |
| 41 | GO:0008519: ammonium transmembrane transporter activity | 1.37E-03 |
| 42 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.58E-03 |
| 43 | GO:0102391: decanoate--CoA ligase activity | 1.64E-03 |
| 44 | GO:0004683: calmodulin-dependent protein kinase activity | 1.67E-03 |
| 45 | GO:0004427: inorganic diphosphatase activity | 1.92E-03 |
| 46 | GO:0030515: snoRNA binding | 1.92E-03 |
| 47 | GO:0008320: protein transmembrane transporter activity | 1.92E-03 |
| 48 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.92E-03 |
| 49 | GO:0015288: porin activity | 2.22E-03 |
| 50 | GO:0008308: voltage-gated anion channel activity | 2.54E-03 |
| 51 | GO:0003729: mRNA binding | 3.42E-03 |
| 52 | GO:0004568: chitinase activity | 3.57E-03 |
| 53 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.02E-03 |
| 54 | GO:0009982: pseudouridine synthase activity | 4.71E-03 |
| 55 | GO:0015266: protein channel activity | 4.71E-03 |
| 56 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.71E-03 |
| 57 | GO:0031072: heat shock protein binding | 4.71E-03 |
| 58 | GO:0030553: cGMP binding | 5.54E-03 |
| 59 | GO:0003712: transcription cofactor activity | 5.54E-03 |
| 60 | GO:0030552: cAMP binding | 5.54E-03 |
| 61 | GO:0015035: protein disulfide oxidoreductase activity | 5.87E-03 |
| 62 | GO:0004407: histone deacetylase activity | 6.42E-03 |
| 63 | GO:0005528: FK506 binding | 6.42E-03 |
| 64 | GO:0005216: ion channel activity | 6.87E-03 |
| 65 | GO:0005515: protein binding | 8.54E-03 |
| 66 | GO:0030551: cyclic nucleotide binding | 9.83E-03 |
| 67 | GO:0005249: voltage-gated potassium channel activity | 9.83E-03 |
| 68 | GO:0030276: clathrin binding | 1.04E-02 |
| 69 | GO:0003713: transcription coactivator activity | 1.04E-02 |
| 70 | GO:0010181: FMN binding | 1.09E-02 |
| 71 | GO:0003743: translation initiation factor activity | 1.15E-02 |
| 72 | GO:0005524: ATP binding | 1.27E-02 |
| 73 | GO:0008168: methyltransferase activity | 1.47E-02 |
| 74 | GO:0016597: amino acid binding | 1.50E-02 |
| 75 | GO:0015250: water channel activity | 1.56E-02 |
| 76 | GO:0004721: phosphoprotein phosphatase activity | 1.75E-02 |
| 77 | GO:0005516: calmodulin binding | 1.89E-02 |
| 78 | GO:0003735: structural constituent of ribosome | 1.98E-02 |
| 79 | GO:0046872: metal ion binding | 2.17E-02 |
| 80 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.37E-02 |
| 81 | GO:0042393: histone binding | 2.44E-02 |
| 82 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.44E-02 |
| 83 | GO:0003924: GTPase activity | 2.81E-02 |
| 84 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.98E-02 |
| 85 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.98E-02 |
| 86 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.98E-02 |
| 87 | GO:0016758: transferase activity, transferring hexosyl groups | 4.88E-02 |
| 88 | GO:0019843: rRNA binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070545: PeBoW complex | 0.00E+00 |
| 2 | GO:0031205: endoplasmic reticulum Sec complex | 0.00E+00 |
| 3 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 4 | GO:0005784: Sec61 translocon complex | 0.00E+00 |
| 5 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 6 | GO:0005730: nucleolus | 4.04E-11 |
| 7 | GO:0005829: cytosol | 3.75E-08 |
| 8 | GO:0005788: endoplasmic reticulum lumen | 4.87E-06 |
| 9 | GO:0005774: vacuolar membrane | 1.88E-05 |
| 10 | GO:0005783: endoplasmic reticulum | 5.70E-05 |
| 11 | GO:0030687: preribosome, large subunit precursor | 5.92E-05 |
| 12 | GO:0005742: mitochondrial outer membrane translocase complex | 9.69E-05 |
| 13 | GO:0030665: clathrin-coated vesicle membrane | 1.44E-04 |
| 14 | GO:0005618: cell wall | 1.52E-04 |
| 15 | GO:0009506: plasmodesma | 1.67E-04 |
| 16 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.00E-04 |
| 17 | GO:0046861: glyoxysomal membrane | 4.65E-04 |
| 18 | GO:0005741: mitochondrial outer membrane | 5.06E-04 |
| 19 | GO:0005886: plasma membrane | 5.34E-04 |
| 20 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 6.53E-04 |
| 21 | GO:0031429: box H/ACA snoRNP complex | 6.66E-04 |
| 22 | GO:0005743: mitochondrial inner membrane | 9.08E-04 |
| 23 | GO:0005773: vacuole | 1.15E-03 |
| 24 | GO:0005759: mitochondrial matrix | 1.30E-03 |
| 25 | GO:0032588: trans-Golgi network membrane | 1.37E-03 |
| 26 | GO:0031428: box C/D snoRNP complex | 1.37E-03 |
| 27 | GO:0005887: integral component of plasma membrane | 1.60E-03 |
| 28 | GO:0016363: nuclear matrix | 1.64E-03 |
| 29 | GO:0019005: SCF ubiquitin ligase complex | 1.84E-03 |
| 30 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 1.92E-03 |
| 31 | GO:0030131: clathrin adaptor complex | 2.22E-03 |
| 32 | GO:0009514: glyoxysome | 2.54E-03 |
| 33 | GO:0000326: protein storage vacuole | 2.54E-03 |
| 34 | GO:0046930: pore complex | 2.54E-03 |
| 35 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.84E-03 |
| 36 | GO:0031901: early endosome membrane | 2.87E-03 |
| 37 | GO:0017119: Golgi transport complex | 3.57E-03 |
| 38 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.57E-03 |
| 39 | GO:0032040: small-subunit processome | 4.32E-03 |
| 40 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.32E-03 |
| 41 | GO:0000419: DNA-directed RNA polymerase V complex | 5.98E-03 |
| 42 | GO:0005758: mitochondrial intermembrane space | 6.42E-03 |
| 43 | GO:0005654: nucleoplasm | 6.95E-03 |
| 44 | GO:0005840: ribosome | 7.52E-03 |
| 45 | GO:0005794: Golgi apparatus | 8.20E-03 |
| 46 | GO:0009505: plant-type cell wall | 9.87E-03 |
| 47 | GO:0016592: mediator complex | 1.26E-02 |
| 48 | GO:0005789: endoplasmic reticulum membrane | 1.33E-02 |
| 49 | GO:0032580: Golgi cisterna membrane | 1.38E-02 |
| 50 | GO:0030529: intracellular ribonucleoprotein complex | 1.56E-02 |
| 51 | GO:0000932: P-body | 1.56E-02 |
| 52 | GO:0015934: large ribosomal subunit | 2.09E-02 |
| 53 | GO:0005739: mitochondrion | 2.13E-02 |
| 54 | GO:0031902: late endosome membrane | 2.52E-02 |
| 55 | GO:0000502: proteasome complex | 3.30E-02 |
| 56 | GO:0005747: mitochondrial respiratory chain complex I | 3.80E-02 |
| 57 | GO:0005834: heterotrimeric G-protein complex | 3.89E-02 |
| 58 | GO:0005732: small nucleolar ribonucleoprotein complex | 4.51E-02 |
| 59 | GO:0022626: cytosolic ribosome | 4.74E-02 |
| 60 | GO:0048046: apoplast | 4.76E-02 |