co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G21860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
2	GO:2001294: malonyl-CoA catabolic process	0.00E+00
3	GO:0080051: cutin transport	1.97E-05
4	GO:0005991: trehalose metabolic process	1.97E-05
5	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.97E-05
6	GO:0016122: xanthophyll metabolic process	5.10E-05
7	GO:0009915: phloem sucrose loading	5.10E-05
8	GO:0015908: fatty acid transport	5.10E-05
9	GO:0015675: nickel cation transport	9.05E-05
10	GO:0006753: nucleoside phosphate metabolic process	9.05E-05
11	GO:0010021: amylopectin biosynthetic process	1.86E-04
12	GO:0010222: stem vascular tissue pattern formation	1.86E-04
13	GO:0015994: chlorophyll metabolic process	1.86E-04
14	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.97E-04
15	GO:0010189: vitamin E biosynthetic process	3.57E-04
16	GO:0015937: coenzyme A biosynthetic process	4.19E-04
17	GO:0048564: photosystem I assembly	4.84E-04
18	GO:0005978: glycogen biosynthetic process	4.84E-04
19	GO:0070413: trehalose metabolism in response to stress	4.84E-04
20	GO:0010206: photosystem II repair	6.19E-04
21	GO:0000373: Group II intron splicing	6.19E-04
22	GO:0005982: starch metabolic process	6.90E-04
23	GO:0010205: photoinhibition	6.90E-04
24	GO:0005983: starch catabolic process	9.12E-04
25	GO:0009767: photosynthetic electron transport chain	9.90E-04
26	GO:0010588: cotyledon vascular tissue pattern formation	9.90E-04
27	GO:0009266: response to temperature stimulus	1.07E-03
28	GO:0005992: trehalose biosynthetic process	1.32E-03
29	GO:0010182: sugar mediated signaling pathway	2.08E-03
30	GO:0048544: recognition of pollen	2.18E-03
31	GO:0007018: microtubule-based movement	2.18E-03
32	GO:0019252: starch biosynthetic process	2.29E-03
33	GO:0019761: glucosinolate biosynthetic process	2.50E-03
34	GO:0030163: protein catabolic process	2.61E-03
35	GO:0009832: plant-type cell wall biogenesis	3.80E-03
36	GO:0006631: fatty acid metabolic process	4.86E-03
37	GO:0009644: response to high light intensity	5.42E-03
38	GO:0031347: regulation of defense response	5.86E-03
39	GO:0009790: embryo development	1.05E-02
40	GO:0009451: RNA modification	1.20E-02
41	GO:0006470: protein dephosphorylation	1.30E-02
42	GO:0007166: cell surface receptor signaling pathway	1.30E-02
43	GO:0009658: chloroplast organization	1.61E-02
44	GO:0007275: multicellular organism development	1.88E-02
45	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.92E-02
46	GO:0009793: embryo development ending in seed dormancy	2.21E-02
47	GO:0009651: response to salt stress	3.20E-02
48	GO:0009735: response to cytokinin	3.49E-02
49	GO:0009611: response to wounding	3.78E-02
50	GO:0051301: cell division	3.96E-02
51	GO:0006511: ubiquitin-dependent protein catabolic process	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
2	GO:0009976: tocopherol cyclase activity	0.00E+00
3	GO:0010945: CoA pyrophosphatase activity	1.97E-05
4	GO:0019203: carbohydrate phosphatase activity	1.97E-05
5	GO:0015245: fatty acid transporter activity	1.97E-05
6	GO:0035671: enone reductase activity	1.97E-05
7	GO:0050308: sugar-phosphatase activity	1.97E-05
8	GO:0003844: 1,4-alpha-glucan branching enzyme activity	5.10E-05
9	GO:0015099: nickel cation transmembrane transporter activity	5.10E-05
10	GO:0043169: cation binding	9.05E-05
11	GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	1.36E-04
12	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	1.36E-04
13	GO:0000210: NAD+ diphosphatase activity	2.97E-04
14	GO:2001070: starch binding	2.97E-04
15	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	6.19E-04
16	GO:0004176: ATP-dependent peptidase activity	1.50E-03
17	GO:0016853: isomerase activity	2.18E-03
18	GO:0048038: quinone binding	2.40E-03
19	GO:0016791: phosphatase activity	2.73E-03
20	GO:0008237: metallopeptidase activity	2.84E-03
21	GO:0051213: dioxygenase activity	3.07E-03
22	GO:0004222: metalloendopeptidase activity	3.93E-03
23	GO:0016887: ATPase activity	4.11E-03
24	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.32E-03
25	GO:0003777: microtubule motor activity	6.76E-03
26	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.12E-02
27	GO:0008017: microtubule binding	1.22E-02
28	GO:0016491: oxidoreductase activity	1.25E-02
29	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.40E-02
30	GO:0004672: protein kinase activity	1.40E-02
31	GO:0061630: ubiquitin protein ligase activity	1.94E-02
32	GO:0005524: ATP binding	1.99E-02
33	GO:0016787: hydrolase activity	2.05E-02
34	GO:0042803: protein homodimerization activity	2.20E-02
35	GO:0004519: endonuclease activity	2.63E-02
36	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.54E-02
37	GO:0030246: carbohydrate binding	4.60E-02
38	GO:0005507: copper ion binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009897: external side of plasma membrane	9.05E-05
2	GO:0009507: chloroplast	1.76E-04
3	GO:0009501: amyloplast	4.84E-04
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.19E-04
5	GO:0009534: chloroplast thylakoid	7.26E-04
6	GO:0005871: kinesin complex	1.88E-03
7	GO:0005778: peroxisomal membrane	2.84E-03
8	GO:0010319: stromule	2.84E-03
9	GO:0000151: ubiquitin ligase complex	3.68E-03
10	GO:0009535: chloroplast thylakoid membrane	3.78E-03
11	GO:0009579: thylakoid	5.62E-03
12	GO:0009706: chloroplast inner membrane	8.05E-03
13	GO:0010287: plastoglobule	9.07E-03
14	GO:0009941: chloroplast envelope	9.67E-03
15	GO:0016021: integral component of membrane	1.14E-02
16	GO:0009570: chloroplast stroma	1.48E-02
17	GO:0005874: microtubule	1.83E-02
18	GO:0048046: apoplast	3.47E-02