co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G21580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
2	GO:0006858: extracellular transport	0.00E+00
3	GO:0002376: immune system process	0.00E+00
4	GO:0039694: viral RNA genome replication	0.00E+00
5	GO:0010360: negative regulation of anion channel activity	0.00E+00
6	GO:0030149: sphingolipid catabolic process	0.00E+00
7	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
8	GO:0007141: male meiosis I	0.00E+00
9	GO:0006983: ER overload response	0.00E+00
10	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
11	GO:0048227: plasma membrane to endosome transport	0.00E+00
12	GO:0055121: response to high fluence blue light stimulus by blue high-fluence system	0.00E+00
13	GO:0072722: response to amitrole	0.00E+00
14	GO:0032780: negative regulation of ATPase activity	0.00E+00
15	GO:0006482: protein demethylation	0.00E+00
16	GO:0046685: response to arsenic-containing substance	6.03E-06
17	GO:0006014: D-ribose metabolic process	7.11E-05
18	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	7.11E-05
19	GO:0009819: drought recovery	1.67E-04
20	GO:0019567: arabinose biosynthetic process	2.02E-04
21	GO:0006481: C-terminal protein methylation	2.02E-04
22	GO:1990022: RNA polymerase III complex localization to nucleus	2.02E-04
23	GO:0044376: RNA polymerase II complex import to nucleus	2.02E-04
24	GO:1902361: mitochondrial pyruvate transmembrane transport	2.02E-04
25	GO:0010265: SCF complex assembly	2.02E-04
26	GO:0080120: CAAX-box protein maturation	2.02E-04
27	GO:0071586: CAAX-box protein processing	2.02E-04
28	GO:0030968: endoplasmic reticulum unfolded protein response	2.08E-04
29	GO:0051865: protein autoubiquitination	2.53E-04
30	GO:0043069: negative regulation of programmed cell death	3.54E-04
31	GO:0009915: phloem sucrose loading	4.52E-04
32	GO:0019374: galactolipid metabolic process	4.52E-04
33	GO:0043066: negative regulation of apoptotic process	4.52E-04
34	GO:0006850: mitochondrial pyruvate transport	4.52E-04
35	GO:0019752: carboxylic acid metabolic process	4.52E-04
36	GO:0019441: tryptophan catabolic process to kynurenine	4.52E-04
37	GO:0097054: L-glutamate biosynthetic process	4.52E-04
38	GO:0031648: protein destabilization	4.52E-04
39	GO:0015914: phospholipid transport	4.52E-04
40	GO:1904667: negative regulation of ubiquitin protein ligase activity	4.52E-04
41	GO:0010150: leaf senescence	6.15E-04
42	GO:0010272: response to silver ion	7.36E-04
43	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	7.36E-04
44	GO:0010498: proteasomal protein catabolic process	7.36E-04
45	GO:0010359: regulation of anion channel activity	7.36E-04
46	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.36E-04
47	GO:0010288: response to lead ion	7.36E-04
48	GO:0009410: response to xenobiotic stimulus	7.36E-04
49	GO:0006537: glutamate biosynthetic process	1.05E-03
50	GO:0010255: glucose mediated signaling pathway	1.05E-03
51	GO:0006986: response to unfolded protein	1.05E-03
52	GO:0001676: long-chain fatty acid metabolic process	1.05E-03
53	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.05E-03
54	GO:0034219: carbohydrate transmembrane transport	1.05E-03
55	GO:0030433: ubiquitin-dependent ERAD pathway	1.08E-03
56	GO:0006012: galactose metabolic process	1.18E-03
57	GO:0046686: response to cadmium ion	1.19E-03
58	GO:0033358: UDP-L-arabinose biosynthetic process	1.40E-03
59	GO:0019676: ammonia assimilation cycle	1.40E-03
60	GO:0045227: capsule polysaccharide biosynthetic process	1.40E-03
61	GO:0009738: abscisic acid-activated signaling pathway	1.63E-03
62	GO:0010200: response to chitin	1.72E-03
63	GO:0046283: anthocyanin-containing compound metabolic process	1.78E-03
64	GO:0006461: protein complex assembly	1.78E-03
65	GO:0006623: protein targeting to vacuole	1.85E-03
66	GO:0019252: starch biosynthetic process	1.85E-03
67	GO:0045454: cell redox homeostasis	2.16E-03
68	GO:0048232: male gamete generation	2.19E-03
69	GO:0070814: hydrogen sulfide biosynthetic process	2.19E-03
70	GO:1902456: regulation of stomatal opening	2.19E-03
71	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.19E-03
72	GO:0035435: phosphate ion transmembrane transport	2.19E-03
73	GO:0002238: response to molecule of fungal origin	2.19E-03
74	GO:0010405: arabinogalactan protein metabolic process	2.19E-03
75	GO:0048280: vesicle fusion with Golgi apparatus	2.63E-03
76	GO:0098655: cation transmembrane transport	2.63E-03
77	GO:0010189: vitamin E biosynthetic process	2.63E-03
78	GO:0015031: protein transport	2.66E-03
79	GO:0009615: response to virus	2.85E-03
80	GO:1900056: negative regulation of leaf senescence	3.09E-03
81	GO:0000338: protein deneddylation	3.09E-03
82	GO:1902074: response to salt	3.09E-03
83	GO:0050790: regulation of catalytic activity	3.09E-03
84	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.59E-03
85	GO:0043068: positive regulation of programmed cell death	3.59E-03
86	GO:0006605: protein targeting	3.59E-03
87	GO:2000070: regulation of response to water deprivation	3.59E-03
88	GO:0006102: isocitrate metabolic process	3.59E-03
89	GO:0016559: peroxisome fission	3.59E-03
90	GO:0006644: phospholipid metabolic process	3.59E-03
91	GO:0006972: hyperosmotic response	4.10E-03
92	GO:0010099: regulation of photomorphogenesis	4.10E-03
93	GO:0009051: pentose-phosphate shunt, oxidative branch	4.65E-03
94	GO:0009821: alkaloid biosynthetic process	4.65E-03
95	GO:0006099: tricarboxylic acid cycle	4.90E-03
96	GO:0030042: actin filament depolymerization	5.21E-03
97	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.21E-03
98	GO:0006631: fatty acid metabolic process	5.57E-03
99	GO:0006896: Golgi to vacuole transport	5.80E-03
100	GO:0051026: chiasma assembly	5.80E-03
101	GO:0000103: sulfate assimilation	5.80E-03
102	GO:0006032: chitin catabolic process	5.80E-03
103	GO:0000038: very long-chain fatty acid metabolic process	6.41E-03
104	GO:0015770: sucrose transport	6.41E-03
105	GO:0000272: polysaccharide catabolic process	6.41E-03
106	GO:0012501: programmed cell death	7.04E-03
107	GO:0015706: nitrate transport	7.04E-03
108	GO:0000266: mitochondrial fission	7.04E-03
109	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.31E-03
110	GO:0009846: pollen germination	7.58E-03
111	GO:0006626: protein targeting to mitochondrion	7.70E-03
112	GO:0006006: glucose metabolic process	7.70E-03
113	GO:0007034: vacuolar transport	8.37E-03
114	GO:0009266: response to temperature stimulus	8.37E-03
115	GO:0009225: nucleotide-sugar metabolic process	9.07E-03
116	GO:0010167: response to nitrate	9.07E-03
117	GO:0005985: sucrose metabolic process	9.07E-03
118	GO:0034976: response to endoplasmic reticulum stress	9.79E-03
119	GO:0006636: unsaturated fatty acid biosynthetic process	9.79E-03
120	GO:0000027: ribosomal large subunit assembly	1.05E-02
121	GO:0009863: salicylic acid mediated signaling pathway	1.05E-02
122	GO:2000377: regulation of reactive oxygen species metabolic process	1.05E-02
123	GO:0009553: embryo sac development	1.13E-02
124	GO:0018105: peptidyl-serine phosphorylation	1.20E-02
125	GO:0016998: cell wall macromolecule catabolic process	1.21E-02
126	GO:0015992: proton transport	1.21E-02
127	GO:0009814: defense response, incompatible interaction	1.29E-02
128	GO:0007131: reciprocal meiotic recombination	1.29E-02
129	GO:0031348: negative regulation of defense response	1.29E-02
130	GO:0080092: regulation of pollen tube growth	1.29E-02
131	GO:0010091: trichome branching	1.45E-02
132	GO:0042147: retrograde transport, endosome to Golgi	1.54E-02
133	GO:0080022: primary root development	1.62E-02
134	GO:0010501: RNA secondary structure unwinding	1.62E-02
135	GO:0010087: phloem or xylem histogenesis	1.62E-02
136	GO:0006520: cellular amino acid metabolic process	1.71E-02
137	GO:0009651: response to salt stress	1.76E-02
138	GO:0042752: regulation of circadian rhythm	1.80E-02
139	GO:0009646: response to absence of light	1.80E-02
140	GO:0006633: fatty acid biosynthetic process	1.83E-02
141	GO:0010183: pollen tube guidance	1.89E-02
142	GO:0071554: cell wall organization or biogenesis	1.99E-02
143	GO:0006891: intra-Golgi vesicle-mediated transport	1.99E-02
144	GO:0010193: response to ozone	1.99E-02
145	GO:0007264: small GTPase mediated signal transduction	2.08E-02
146	GO:0009630: gravitropism	2.08E-02
147	GO:0030163: protein catabolic process	2.18E-02
148	GO:1901657: glycosyl compound metabolic process	2.18E-02
149	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.25E-02
150	GO:0055114: oxidation-reduction process	2.27E-02
151	GO:0006914: autophagy	2.28E-02
152	GO:0006310: DNA recombination	2.28E-02
153	GO:0051607: defense response to virus	2.48E-02
154	GO:0001666: response to hypoxia	2.58E-02
155	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.69E-02
156	GO:0042128: nitrate assimilation	2.80E-02
157	GO:0009627: systemic acquired resistance	2.80E-02
158	GO:0006888: ER to Golgi vesicle-mediated transport	2.90E-02
159	GO:0009832: plant-type cell wall biogenesis	3.23E-02
160	GO:0009407: toxin catabolic process	3.35E-02
161	GO:0006970: response to osmotic stress	3.35E-02
162	GO:0009860: pollen tube growth	3.35E-02
163	GO:0010119: regulation of stomatal movement	3.46E-02
164	GO:0010043: response to zinc ion	3.46E-02
165	GO:0007049: cell cycle	3.48E-02
166	GO:0006468: protein phosphorylation	3.60E-02
167	GO:0009867: jasmonic acid mediated signaling pathway	3.69E-02
168	GO:0016051: carbohydrate biosynthetic process	3.69E-02
169	GO:0006511: ubiquitin-dependent protein catabolic process	4.04E-02
170	GO:0046777: protein autophosphorylation	4.12E-02
171	GO:0006897: endocytosis	4.18E-02
172	GO:0051707: response to other organism	4.42E-02
173	GO:0009640: photomorphogenesis	4.42E-02
174	GO:0000209: protein polyubiquitination	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
4	GO:0051723: protein methylesterase activity	0.00E+00
5	GO:0042030: ATPase inhibitor activity	0.00E+00
6	GO:0036402: proteasome-activating ATPase activity	7.11E-05
7	GO:0102391: decanoate--CoA ligase activity	9.88E-05
8	GO:0004747: ribokinase activity	9.88E-05
9	GO:0003978: UDP-glucose 4-epimerase activity	9.88E-05
10	GO:0004467: long-chain fatty acid-CoA ligase activity	1.31E-04
11	GO:0008865: fructokinase activity	1.67E-04
12	GO:0019786: Atg8-specific protease activity	2.02E-04
13	GO:0016041: glutamate synthase (ferredoxin) activity	2.02E-04
14	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	2.02E-04
15	GO:0008794: arsenate reductase (glutaredoxin) activity	4.10E-04
16	GO:0004061: arylformamidase activity	4.52E-04
17	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	4.52E-04
18	GO:0019779: Atg8 activating enzyme activity	4.52E-04
19	GO:0015036: disulfide oxidoreductase activity	4.52E-04
20	GO:0004450: isocitrate dehydrogenase (NADP+) activity	4.52E-04
21	GO:0032791: lead ion binding	4.52E-04
22	GO:0017025: TBP-class protein binding	6.71E-04
23	GO:0050833: pyruvate transmembrane transporter activity	7.36E-04
24	GO:0004781: sulfate adenylyltransferase (ATP) activity	7.36E-04
25	GO:0016805: dipeptidase activity	7.36E-04
26	GO:0005093: Rab GDP-dissociation inhibitor activity	7.36E-04
27	GO:0008430: selenium binding	7.36E-04
28	GO:0031176: endo-1,4-beta-xylanase activity	1.05E-03
29	GO:0019776: Atg8 ligase activity	1.40E-03
30	GO:0000062: fatty-acyl-CoA binding	1.40E-03
31	GO:0004301: epoxide hydrolase activity	1.40E-03
32	GO:0004659: prenyltransferase activity	1.40E-03
33	GO:0050373: UDP-arabinose 4-epimerase activity	1.40E-03
34	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.40E-03
35	GO:0005509: calcium ion binding	1.41E-03
36	GO:0004040: amidase activity	1.78E-03
37	GO:0005496: steroid binding	1.78E-03
38	GO:0051538: 3 iron, 4 sulfur cluster binding	1.78E-03
39	GO:0005524: ATP binding	1.85E-03
40	GO:0005515: protein binding	1.86E-03
41	GO:0031593: polyubiquitin binding	2.19E-03
42	GO:0047714: galactolipase activity	2.19E-03
43	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.19E-03
44	GO:0004602: glutathione peroxidase activity	2.63E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	2.63E-03
46	GO:0016831: carboxy-lyase activity	3.09E-03
47	GO:0008506: sucrose:proton symporter activity	3.09E-03
48	GO:0008235: metalloexopeptidase activity	3.09E-03
49	GO:0043295: glutathione binding	3.09E-03
50	GO:0004620: phospholipase activity	3.09E-03
51	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.17E-03
52	GO:0004683: calmodulin-dependent protein kinase activity	3.35E-03
53	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.10E-03
54	GO:0003678: DNA helicase activity	4.65E-03
55	GO:0004743: pyruvate kinase activity	5.21E-03
56	GO:0047617: acyl-CoA hydrolase activity	5.21E-03
57	GO:0030955: potassium ion binding	5.21E-03
58	GO:0016844: strictosidine synthase activity	5.21E-03
59	GO:0015112: nitrate transmembrane transporter activity	5.21E-03
60	GO:0016887: ATPase activity	5.77E-03
61	GO:0004364: glutathione transferase activity	5.80E-03
62	GO:0004568: chitinase activity	5.80E-03
63	GO:0004177: aminopeptidase activity	6.41E-03
64	GO:0008378: galactosyltransferase activity	7.04E-03
65	GO:0016787: hydrolase activity	7.42E-03
66	GO:0000175: 3'-5'-exoribonuclease activity	7.70E-03
67	GO:0005315: inorganic phosphate transmembrane transporter activity	7.70E-03
68	GO:0004175: endopeptidase activity	8.37E-03
69	GO:0004535: poly(A)-specific ribonuclease activity	8.37E-03
70	GO:0061630: ubiquitin protein ligase activity	8.73E-03
71	GO:0016301: kinase activity	8.74E-03
72	GO:0008061: chitin binding	9.07E-03
73	GO:0031418: L-ascorbic acid binding	1.05E-02
74	GO:0015035: protein disulfide oxidoreductase activity	1.20E-02
75	GO:0004540: ribonuclease activity	1.21E-02
76	GO:0004298: threonine-type endopeptidase activity	1.21E-02
77	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.21E-02
78	GO:0008408: 3'-5' exonuclease activity	1.21E-02
79	GO:0003924: GTPase activity	1.34E-02
80	GO:0003727: single-stranded RNA binding	1.45E-02
81	GO:0047134: protein-disulfide reductase activity	1.54E-02
82	GO:0010181: FMN binding	1.80E-02
83	GO:0004791: thioredoxin-disulfide reductase activity	1.80E-02
84	GO:0004872: receptor activity	1.89E-02
85	GO:0004197: cysteine-type endopeptidase activity	2.08E-02
86	GO:0008483: transaminase activity	2.38E-02
87	GO:0016413: O-acetyltransferase activity	2.48E-02
88	GO:0016597: amino acid binding	2.48E-02
89	GO:0042802: identical protein binding	2.56E-02
90	GO:0102483: scopolin beta-glucosidase activity	2.90E-02
91	GO:0004806: triglyceride lipase activity	2.90E-02
92	GO:0004004: ATP-dependent RNA helicase activity	2.90E-02
93	GO:0000287: magnesium ion binding	3.06E-02
94	GO:0016491: oxidoreductase activity	3.08E-02
95	GO:0005096: GTPase activator activity	3.23E-02
96	GO:0004842: ubiquitin-protein transferase activity	3.31E-02
97	GO:0004222: metalloendopeptidase activity	3.35E-02
98	GO:0030145: manganese ion binding	3.46E-02
99	GO:0004674: protein serine/threonine kinase activity	3.61E-02
100	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.69E-02
101	GO:0043565: sequence-specific DNA binding	3.86E-02
102	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.90E-02
103	GO:0008422: beta-glucosidase activity	3.93E-02
104	GO:0000149: SNARE binding	3.93E-02
105	GO:0030246: carbohydrate binding	4.00E-02
106	GO:0050661: NADP binding	4.05E-02
107	GO:0005484: SNAP receptor activity	4.42E-02
108	GO:0005516: calmodulin binding	4.58E-02
109	GO:0005198: structural molecule activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005789: endoplasmic reticulum membrane	1.86E-06
3	GO:0005783: endoplasmic reticulum	3.63E-06
4	GO:0005829: cytosol	7.56E-06
5	GO:0005773: vacuole	8.48E-05
6	GO:0031597: cytosolic proteasome complex	9.88E-05
7	GO:0031595: nuclear proteasome complex	1.31E-04
8	GO:0005794: Golgi apparatus	1.32E-04
9	GO:0005886: plasma membrane	1.52E-04
10	GO:0030014: CCR4-NOT complex	2.02E-04
11	GO:0005778: peroxisomal membrane	2.57E-04
12	GO:0008540: proteasome regulatory particle, base subcomplex	3.01E-04
13	GO:0031314: extrinsic component of mitochondrial inner membrane	4.52E-04
14	GO:0031902: late endosome membrane	7.17E-04
15	GO:0030139: endocytic vesicle	7.36E-04
16	GO:0030658: transport vesicle membrane	1.05E-03
17	GO:0031461: cullin-RING ubiquitin ligase complex	1.05E-03
18	GO:0005775: vacuolar lumen	1.05E-03
19	GO:0000502: proteasome complex	1.15E-03
20	GO:0005635: nuclear envelope	1.25E-03
21	GO:0005776: autophagosome	1.40E-03
22	GO:0030140: trans-Golgi network transport vesicle	2.19E-03
23	GO:0000794: condensed nuclear chromosome	3.09E-03
24	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.59E-03
25	GO:0000421: autophagosome membrane	3.59E-03
26	GO:0031305: integral component of mitochondrial inner membrane	3.59E-03
27	GO:0012507: ER to Golgi transport vesicle membrane	3.59E-03
28	GO:0045273: respiratory chain complex II	3.59E-03
29	GO:0009514: glyoxysome	4.10E-03
30	GO:0019773: proteasome core complex, alpha-subunit complex	4.10E-03
31	GO:0016020: membrane	4.47E-03
32	GO:0008180: COP9 signalosome	4.65E-03
33	GO:0005819: spindle	5.12E-03
34	GO:0016021: integral component of membrane	5.20E-03
35	GO:0017119: Golgi transport complex	5.80E-03
36	GO:0048471: perinuclear region of cytoplasm	6.41E-03
37	GO:0005764: lysosome	8.37E-03
38	GO:0005777: peroxisome	8.74E-03
39	GO:0030176: integral component of endoplasmic reticulum membrane	9.07E-03
40	GO:0043234: protein complex	9.79E-03
41	GO:0005839: proteasome core complex	1.21E-02
42	GO:0005741: mitochondrial outer membrane	1.21E-02
43	GO:0005737: cytoplasm	1.21E-02
44	GO:0031410: cytoplasmic vesicle	1.29E-02
45	GO:0015629: actin cytoskeleton	1.37E-02
46	GO:0005802: trans-Golgi network	1.45E-02
47	GO:0005623: cell	1.50E-02
48	GO:0009524: phragmoplast	1.54E-02
49	GO:0000790: nuclear chromatin	1.54E-02
50	GO:0005770: late endosome	1.71E-02
51	GO:0005768: endosome	1.75E-02
52	GO:0032580: Golgi cisterna membrane	2.28E-02
53	GO:0000151: ubiquitin ligase complex	3.12E-02
54	GO:0000325: plant-type vacuole	3.46E-02
55	GO:0005874: microtubule	3.73E-02
56	GO:0031201: SNARE complex	4.18E-02
57	GO:0005774: vacuolar membrane	4.89E-02