GO Enrichment Analysis of Co-expressed Genes with
AT4G21190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019685: photosynthesis, dark reaction | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 5 | GO:0010021: amylopectin biosynthetic process | 5.16E-06 |
| 6 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.33E-05 |
| 7 | GO:0071482: cellular response to light stimulus | 4.37E-05 |
| 8 | GO:0000373: Group II intron splicing | 5.45E-05 |
| 9 | GO:0010206: photosystem II repair | 5.45E-05 |
| 10 | GO:0000023: maltose metabolic process | 7.23E-05 |
| 11 | GO:0005983: starch catabolic process | 1.10E-04 |
| 12 | GO:0006094: gluconeogenesis | 1.27E-04 |
| 13 | GO:0005986: sucrose biosynthetic process | 1.27E-04 |
| 14 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.74E-04 |
| 15 | GO:0071457: cellular response to ozone | 1.74E-04 |
| 16 | GO:0009629: response to gravity | 1.74E-04 |
| 17 | GO:0080005: photosystem stoichiometry adjustment | 1.74E-04 |
| 18 | GO:0007154: cell communication | 1.74E-04 |
| 19 | GO:0016226: iron-sulfur cluster assembly | 2.78E-04 |
| 20 | GO:0045910: negative regulation of DNA recombination | 2.93E-04 |
| 21 | GO:0006000: fructose metabolic process | 2.93E-04 |
| 22 | GO:0070828: heterochromatin organization | 2.93E-04 |
| 23 | GO:2001141: regulation of RNA biosynthetic process | 4.23E-04 |
| 24 | GO:0071484: cellular response to light intensity | 4.23E-04 |
| 25 | GO:0009152: purine ribonucleotide biosynthetic process | 4.23E-04 |
| 26 | GO:0046653: tetrahydrofolate metabolic process | 4.23E-04 |
| 27 | GO:0051016: barbed-end actin filament capping | 4.23E-04 |
| 28 | GO:0019252: starch biosynthetic process | 4.81E-04 |
| 29 | GO:0071486: cellular response to high light intensity | 5.65E-04 |
| 30 | GO:0009247: glycolipid biosynthetic process | 7.14E-04 |
| 31 | GO:0071493: cellular response to UV-B | 7.14E-04 |
| 32 | GO:0010027: thylakoid membrane organization | 7.34E-04 |
| 33 | GO:0042026: protein refolding | 1.04E-03 |
| 34 | GO:0006458: 'de novo' protein folding | 1.04E-03 |
| 35 | GO:0051693: actin filament capping | 1.21E-03 |
| 36 | GO:0009645: response to low light intensity stimulus | 1.21E-03 |
| 37 | GO:0048564: photosystem I assembly | 1.40E-03 |
| 38 | GO:0005978: glycogen biosynthetic process | 1.40E-03 |
| 39 | GO:0019375: galactolipid biosynthetic process | 1.40E-03 |
| 40 | GO:0009704: de-etiolation | 1.40E-03 |
| 41 | GO:0006002: fructose 6-phosphate metabolic process | 1.59E-03 |
| 42 | GO:0015996: chlorophyll catabolic process | 1.59E-03 |
| 43 | GO:0019430: removal of superoxide radicals | 1.59E-03 |
| 44 | GO:0015979: photosynthesis | 1.62E-03 |
| 45 | GO:0006098: pentose-phosphate shunt | 1.80E-03 |
| 46 | GO:0005982: starch metabolic process | 2.01E-03 |
| 47 | GO:0010205: photoinhibition | 2.01E-03 |
| 48 | GO:0032259: methylation | 2.13E-03 |
| 49 | GO:0006298: mismatch repair | 2.23E-03 |
| 50 | GO:0009773: photosynthetic electron transport in photosystem I | 2.46E-03 |
| 51 | GO:0006352: DNA-templated transcription, initiation | 2.46E-03 |
| 52 | GO:0009750: response to fructose | 2.46E-03 |
| 53 | GO:0030036: actin cytoskeleton organization | 2.94E-03 |
| 54 | GO:0010628: positive regulation of gene expression | 2.94E-03 |
| 55 | GO:0007015: actin filament organization | 3.19E-03 |
| 56 | GO:0016575: histone deacetylation | 4.26E-03 |
| 57 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.26E-03 |
| 58 | GO:0061077: chaperone-mediated protein folding | 4.54E-03 |
| 59 | GO:0070417: cellular response to cold | 5.74E-03 |
| 60 | GO:0006342: chromatin silencing | 6.38E-03 |
| 61 | GO:0071472: cellular response to salt stress | 6.38E-03 |
| 62 | GO:0006814: sodium ion transport | 6.70E-03 |
| 63 | GO:0030163: protein catabolic process | 8.07E-03 |
| 64 | GO:0001666: response to hypoxia | 9.54E-03 |
| 65 | GO:0016311: dephosphorylation | 1.11E-02 |
| 66 | GO:0018298: protein-chromophore linkage | 1.15E-02 |
| 67 | GO:0009631: cold acclimation | 1.27E-02 |
| 68 | GO:0009853: photorespiration | 1.36E-02 |
| 69 | GO:0009644: response to high light intensity | 1.72E-02 |
| 70 | GO:0006855: drug transmembrane transport | 1.81E-02 |
| 71 | GO:0006364: rRNA processing | 2.01E-02 |
| 72 | GO:0006417: regulation of translation | 2.16E-02 |
| 73 | GO:0006096: glycolytic process | 2.26E-02 |
| 74 | GO:0048316: seed development | 2.31E-02 |
| 75 | GO:0009624: response to nematode | 2.58E-02 |
| 76 | GO:0009058: biosynthetic process | 3.15E-02 |
| 77 | GO:0009790: embryo development | 3.38E-02 |
| 78 | GO:0006413: translational initiation | 3.63E-02 |
| 79 | GO:0010468: regulation of gene expression | 4.32E-02 |
| 80 | GO:0006508: proteolysis | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 4 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 6 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 7 | GO:0070006: metalloaminopeptidase activity | 7.23E-05 |
| 8 | GO:0034256: chlorophyll(ide) b reductase activity | 7.23E-05 |
| 9 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 7.23E-05 |
| 10 | GO:0004047: aminomethyltransferase activity | 1.74E-04 |
| 11 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 1.74E-04 |
| 12 | GO:0033201: alpha-1,4-glucan synthase activity | 1.74E-04 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.74E-04 |
| 14 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.74E-04 |
| 15 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.93E-04 |
| 16 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.93E-04 |
| 17 | GO:0043169: cation binding | 2.93E-04 |
| 18 | GO:0004373: glycogen (starch) synthase activity | 2.93E-04 |
| 19 | GO:0050307: sucrose-phosphate phosphatase activity | 2.93E-04 |
| 20 | GO:0008508: bile acid:sodium symporter activity | 4.23E-04 |
| 21 | GO:0035250: UDP-galactosyltransferase activity | 4.23E-04 |
| 22 | GO:0048487: beta-tubulin binding | 4.23E-04 |
| 23 | GO:0001053: plastid sigma factor activity | 5.65E-04 |
| 24 | GO:0016987: sigma factor activity | 5.65E-04 |
| 25 | GO:0009011: starch synthase activity | 5.65E-04 |
| 26 | GO:0004721: phosphoprotein phosphatase activity | 8.59E-04 |
| 27 | GO:0030983: mismatched DNA binding | 8.73E-04 |
| 28 | GO:0004332: fructose-bisphosphate aldolase activity | 8.73E-04 |
| 29 | GO:0004784: superoxide dismutase activity | 8.73E-04 |
| 30 | GO:0008168: methyltransferase activity | 1.01E-03 |
| 31 | GO:0004033: aldo-keto reductase (NADP) activity | 1.40E-03 |
| 32 | GO:0043022: ribosome binding | 1.40E-03 |
| 33 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.59E-03 |
| 34 | GO:0004177: aminopeptidase activity | 2.46E-03 |
| 35 | GO:0044183: protein binding involved in protein folding | 2.46E-03 |
| 36 | GO:0015386: potassium:proton antiporter activity | 2.46E-03 |
| 37 | GO:0016491: oxidoreductase activity | 3.66E-03 |
| 38 | GO:0031409: pigment binding | 3.71E-03 |
| 39 | GO:0051536: iron-sulfur cluster binding | 3.98E-03 |
| 40 | GO:0004407: histone deacetylase activity | 3.98E-03 |
| 41 | GO:0005528: FK506 binding | 3.98E-03 |
| 42 | GO:0015079: potassium ion transmembrane transporter activity | 4.26E-03 |
| 43 | GO:0004176: ATP-dependent peptidase activity | 4.54E-03 |
| 44 | GO:0003684: damaged DNA binding | 8.43E-03 |
| 45 | GO:0008237: metallopeptidase activity | 8.79E-03 |
| 46 | GO:0016168: chlorophyll binding | 9.92E-03 |
| 47 | GO:0008236: serine-type peptidase activity | 1.11E-02 |
| 48 | GO:0015238: drug transmembrane transporter activity | 1.19E-02 |
| 49 | GO:0004222: metalloendopeptidase activity | 1.23E-02 |
| 50 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.27E-02 |
| 51 | GO:0009055: electron carrier activity | 1.50E-02 |
| 52 | GO:0043621: protein self-association | 1.72E-02 |
| 53 | GO:0005198: structural molecule activity | 1.77E-02 |
| 54 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.81E-02 |
| 55 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.01E-02 |
| 56 | GO:0016887: ATPase activity | 2.16E-02 |
| 57 | GO:0016874: ligase activity | 2.47E-02 |
| 58 | GO:0003779: actin binding | 2.53E-02 |
| 59 | GO:0051082: unfolded protein binding | 2.58E-02 |
| 60 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.09E-02 |
| 61 | GO:0004252: serine-type endopeptidase activity | 3.26E-02 |
| 62 | GO:0015297: antiporter activity | 3.69E-02 |
| 63 | GO:0008194: UDP-glycosyltransferase activity | 4.13E-02 |
| 64 | GO:0003743: translation initiation factor activity | 4.26E-02 |
| 65 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.52E-02 |
| 66 | GO:0046872: metal ion binding | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.32E-23 |
| 3 | GO:0009941: chloroplast envelope | 3.07E-09 |
| 4 | GO:0009534: chloroplast thylakoid | 4.67E-09 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 8.70E-09 |
| 6 | GO:0009570: chloroplast stroma | 1.81E-06 |
| 7 | GO:0009501: amyloplast | 3.42E-05 |
| 8 | GO:0009782: photosystem I antenna complex | 7.23E-05 |
| 9 | GO:0000792: heterochromatin | 1.74E-04 |
| 10 | GO:0008290: F-actin capping protein complex | 1.74E-04 |
| 11 | GO:0031357: integral component of chloroplast inner membrane | 1.74E-04 |
| 12 | GO:0009579: thylakoid | 1.84E-04 |
| 13 | GO:0010287: plastoglobule | 3.82E-04 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 4.09E-04 |
| 15 | GO:0031977: thylakoid lumen | 1.40E-03 |
| 16 | GO:0009706: chloroplast inner membrane | 2.86E-03 |
| 17 | GO:0030076: light-harvesting complex | 3.44E-03 |
| 18 | GO:0000790: nuclear chromatin | 5.74E-03 |
| 19 | GO:0031969: chloroplast membrane | 9.41E-03 |
| 20 | GO:0030529: intracellular ribonucleoprotein complex | 9.54E-03 |
| 21 | GO:0000786: nucleosome | 1.32E-02 |