GO Enrichment Analysis of Co-expressed Genes with
AT4G18810
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019685: photosynthesis, dark reaction | 0.00E+00 |
| 2 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 3 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 4 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 5 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 6 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 7 | GO:0009658: chloroplast organization | 2.01E-06 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.42E-06 |
| 9 | GO:0048564: photosystem I assembly | 6.41E-05 |
| 10 | GO:0071482: cellular response to light stimulus | 8.11E-05 |
| 11 | GO:0031998: regulation of fatty acid beta-oxidation | 1.08E-04 |
| 12 | GO:0000023: maltose metabolic process | 1.08E-04 |
| 13 | GO:0010362: negative regulation of anion channel activity by blue light | 1.08E-04 |
| 14 | GO:0051775: response to redox state | 1.08E-04 |
| 15 | GO:0006659: phosphatidylserine biosynthetic process | 1.08E-04 |
| 16 | GO:0080093: regulation of photorespiration | 1.08E-04 |
| 17 | GO:0018298: protein-chromophore linkage | 1.32E-04 |
| 18 | GO:0006415: translational termination | 1.69E-04 |
| 19 | GO:0009853: photorespiration | 1.85E-04 |
| 20 | GO:0005986: sucrose biosynthetic process | 2.25E-04 |
| 21 | GO:0006108: malate metabolic process | 2.25E-04 |
| 22 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.52E-04 |
| 23 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.52E-04 |
| 24 | GO:0009629: response to gravity | 2.52E-04 |
| 25 | GO:0007154: cell communication | 2.52E-04 |
| 26 | GO:0097054: L-glutamate biosynthetic process | 2.52E-04 |
| 27 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.52E-04 |
| 28 | GO:0009735: response to cytokinin | 3.12E-04 |
| 29 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.94E-04 |
| 30 | GO:0005977: glycogen metabolic process | 4.19E-04 |
| 31 | GO:0006011: UDP-glucose metabolic process | 4.19E-04 |
| 32 | GO:0000913: preprophase band assembly | 4.19E-04 |
| 33 | GO:0031022: nuclear migration along microfilament | 4.19E-04 |
| 34 | GO:0006107: oxaloacetate metabolic process | 6.01E-04 |
| 35 | GO:0006537: glutamate biosynthetic process | 6.01E-04 |
| 36 | GO:2001141: regulation of RNA biosynthetic process | 6.01E-04 |
| 37 | GO:0055114: oxidation-reduction process | 6.04E-04 |
| 38 | GO:0019676: ammonia assimilation cycle | 7.98E-04 |
| 39 | GO:0051781: positive regulation of cell division | 7.98E-04 |
| 40 | GO:0048442: sepal development | 7.98E-04 |
| 41 | GO:0019464: glycine decarboxylation via glycine cleavage system | 7.98E-04 |
| 42 | GO:0006546: glycine catabolic process | 7.98E-04 |
| 43 | GO:0006021: inositol biosynthetic process | 7.98E-04 |
| 44 | GO:0006734: NADH metabolic process | 7.98E-04 |
| 45 | GO:0009902: chloroplast relocation | 7.98E-04 |
| 46 | GO:0010021: amylopectin biosynthetic process | 7.98E-04 |
| 47 | GO:0009791: post-embryonic development | 8.05E-04 |
| 48 | GO:0019252: starch biosynthetic process | 8.05E-04 |
| 49 | GO:0030163: protein catabolic process | 9.72E-04 |
| 50 | GO:0009247: glycolipid biosynthetic process | 1.01E-03 |
| 51 | GO:0016120: carotene biosynthetic process | 1.01E-03 |
| 52 | GO:0043097: pyrimidine nucleoside salvage | 1.01E-03 |
| 53 | GO:0009904: chloroplast accumulation movement | 1.01E-03 |
| 54 | GO:0006097: glyoxylate cycle | 1.01E-03 |
| 55 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.23E-03 |
| 56 | GO:0006206: pyrimidine nucleobase metabolic process | 1.23E-03 |
| 57 | GO:0010942: positive regulation of cell death | 1.23E-03 |
| 58 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.23E-03 |
| 59 | GO:0042026: protein refolding | 1.47E-03 |
| 60 | GO:1901259: chloroplast rRNA processing | 1.47E-03 |
| 61 | GO:0010076: maintenance of floral meristem identity | 1.47E-03 |
| 62 | GO:0006458: 'de novo' protein folding | 1.47E-03 |
| 63 | GO:0009903: chloroplast avoidance movement | 1.47E-03 |
| 64 | GO:0009854: oxidative photosynthetic carbon pathway | 1.47E-03 |
| 65 | GO:0009645: response to low light intensity stimulus | 1.73E-03 |
| 66 | GO:0009416: response to light stimulus | 1.88E-03 |
| 67 | GO:0009637: response to blue light | 1.99E-03 |
| 68 | GO:0052543: callose deposition in cell wall | 2.00E-03 |
| 69 | GO:0005978: glycogen biosynthetic process | 2.00E-03 |
| 70 | GO:0019375: galactolipid biosynthetic process | 2.00E-03 |
| 71 | GO:0009704: de-etiolation | 2.00E-03 |
| 72 | GO:0006099: tricarboxylic acid cycle | 2.08E-03 |
| 73 | GO:0009657: plastid organization | 2.28E-03 |
| 74 | GO:0006810: transport | 2.51E-03 |
| 75 | GO:0006098: pentose-phosphate shunt | 2.57E-03 |
| 76 | GO:0009821: alkaloid biosynthetic process | 2.57E-03 |
| 77 | GO:0010206: photosystem II repair | 2.57E-03 |
| 78 | GO:0000373: Group II intron splicing | 2.57E-03 |
| 79 | GO:0009056: catabolic process | 2.57E-03 |
| 80 | GO:0046686: response to cadmium ion | 2.79E-03 |
| 81 | GO:0005982: starch metabolic process | 2.88E-03 |
| 82 | GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 2.88E-03 |
| 83 | GO:0010205: photoinhibition | 2.88E-03 |
| 84 | GO:0009638: phototropism | 2.88E-03 |
| 85 | GO:0015979: photosynthesis | 3.20E-03 |
| 86 | GO:0048441: petal development | 3.20E-03 |
| 87 | GO:0006352: DNA-templated transcription, initiation | 3.53E-03 |
| 88 | GO:0000272: polysaccharide catabolic process | 3.53E-03 |
| 89 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.53E-03 |
| 90 | GO:0006417: regulation of translation | 3.79E-03 |
| 91 | GO:0071365: cellular response to auxin stimulus | 3.87E-03 |
| 92 | GO:0005983: starch catabolic process | 3.87E-03 |
| 93 | GO:0006094: gluconeogenesis | 4.23E-03 |
| 94 | GO:0009767: photosynthetic electron transport chain | 4.23E-03 |
| 95 | GO:0048440: carpel development | 4.59E-03 |
| 96 | GO:0010207: photosystem II assembly | 4.59E-03 |
| 97 | GO:0019253: reductive pentose-phosphate cycle | 4.59E-03 |
| 98 | GO:0042343: indole glucosinolate metabolic process | 4.96E-03 |
| 99 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.35E-03 |
| 100 | GO:0009058: biosynthetic process | 6.41E-03 |
| 101 | GO:0098542: defense response to other organism | 6.56E-03 |
| 102 | GO:0061077: chaperone-mediated protein folding | 6.56E-03 |
| 103 | GO:0016226: iron-sulfur cluster assembly | 6.99E-03 |
| 104 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.99E-03 |
| 105 | GO:0048443: stamen development | 7.87E-03 |
| 106 | GO:0016117: carotenoid biosynthetic process | 8.32E-03 |
| 107 | GO:0070417: cellular response to cold | 8.32E-03 |
| 108 | GO:0007623: circadian rhythm | 8.39E-03 |
| 109 | GO:0009409: response to cold | 8.68E-03 |
| 110 | GO:0010118: stomatal movement | 8.79E-03 |
| 111 | GO:0042631: cellular response to water deprivation | 8.79E-03 |
| 112 | GO:0006508: proteolysis | 9.11E-03 |
| 113 | GO:0009741: response to brassinosteroid | 9.26E-03 |
| 114 | GO:0006520: cellular amino acid metabolic process | 9.26E-03 |
| 115 | GO:0009646: response to absence of light | 9.74E-03 |
| 116 | GO:0007018: microtubule-based movement | 9.74E-03 |
| 117 | GO:0006814: sodium ion transport | 9.74E-03 |
| 118 | GO:0008654: phospholipid biosynthetic process | 1.02E-02 |
| 119 | GO:0032502: developmental process | 1.12E-02 |
| 120 | GO:0016032: viral process | 1.12E-02 |
| 121 | GO:0000910: cytokinesis | 1.34E-02 |
| 122 | GO:0010027: thylakoid membrane organization | 1.39E-02 |
| 123 | GO:0080167: response to karrikin | 1.62E-02 |
| 124 | GO:0009817: defense response to fungus, incompatible interaction | 1.68E-02 |
| 125 | GO:0046777: protein autophosphorylation | 1.73E-02 |
| 126 | GO:0000160: phosphorelay signal transduction system | 1.74E-02 |
| 127 | GO:0010311: lateral root formation | 1.74E-02 |
| 128 | GO:0010218: response to far red light | 1.80E-02 |
| 129 | GO:0009631: cold acclimation | 1.86E-02 |
| 130 | GO:0032259: methylation | 2.29E-02 |
| 131 | GO:0009744: response to sucrose | 2.38E-02 |
| 132 | GO:0000209: protein polyubiquitination | 2.45E-02 |
| 133 | GO:0009644: response to high light intensity | 2.52E-02 |
| 134 | GO:0000165: MAPK cascade | 2.73E-02 |
| 135 | GO:0009809: lignin biosynthetic process | 2.94E-02 |
| 136 | GO:0006096: glycolytic process | 3.32E-02 |
| 137 | GO:0009626: plant-type hypersensitive response | 3.47E-02 |
| 138 | GO:0005975: carbohydrate metabolic process | 3.77E-02 |
| 139 | GO:0009624: response to nematode | 3.78E-02 |
| 140 | GO:0006396: RNA processing | 3.86E-02 |
| 141 | GO:0009742: brassinosteroid mediated signaling pathway | 3.94E-02 |
| 142 | GO:0009611: response to wounding | 4.32E-02 |
| 143 | GO:0009845: seed germination | 4.69E-02 |
| 144 | GO:0009790: embryo development | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 2 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 3 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 7 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 8 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 9 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 10 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 11 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 12 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 13 | GO:0050307: sucrose-phosphate phosphatase activity | 2.29E-06 |
| 14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.03E-05 |
| 15 | GO:0016615: malate dehydrogenase activity | 2.57E-05 |
| 16 | GO:0030060: L-malate dehydrogenase activity | 3.64E-05 |
| 17 | GO:0048038: quinone binding | 5.07E-05 |
| 18 | GO:0003747: translation release factor activity | 1.00E-04 |
| 19 | GO:0070006: metalloaminopeptidase activity | 1.08E-04 |
| 20 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.08E-04 |
| 21 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.08E-04 |
| 22 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.08E-04 |
| 23 | GO:0004222: metalloendopeptidase activity | 1.52E-04 |
| 24 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 2.52E-04 |
| 25 | GO:0004512: inositol-3-phosphate synthase activity | 2.52E-04 |
| 26 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 2.52E-04 |
| 27 | GO:0031409: pigment binding | 3.21E-04 |
| 28 | GO:0043169: cation binding | 4.19E-04 |
| 29 | GO:0032947: protein complex scaffold | 4.19E-04 |
| 30 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 4.19E-04 |
| 31 | GO:0008508: bile acid:sodium symporter activity | 6.01E-04 |
| 32 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.01E-04 |
| 33 | GO:0035250: UDP-galactosyltransferase activity | 6.01E-04 |
| 34 | GO:0016149: translation release factor activity, codon specific | 6.01E-04 |
| 35 | GO:0009882: blue light photoreceptor activity | 6.01E-04 |
| 36 | GO:0001053: plastid sigma factor activity | 7.98E-04 |
| 37 | GO:0008453: alanine-glyoxylate transaminase activity | 7.98E-04 |
| 38 | GO:0016987: sigma factor activity | 7.98E-04 |
| 39 | GO:0009011: starch synthase activity | 7.98E-04 |
| 40 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 7.98E-04 |
| 41 | GO:0008374: O-acyltransferase activity | 1.01E-03 |
| 42 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.01E-03 |
| 43 | GO:0004332: fructose-bisphosphate aldolase activity | 1.23E-03 |
| 44 | GO:0102229: amylopectin maltohydrolase activity | 1.23E-03 |
| 45 | GO:0016168: chlorophyll binding | 1.29E-03 |
| 46 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.47E-03 |
| 47 | GO:0016161: beta-amylase activity | 1.47E-03 |
| 48 | GO:0004849: uridine kinase activity | 1.47E-03 |
| 49 | GO:0003730: mRNA 3'-UTR binding | 1.47E-03 |
| 50 | GO:0004033: aldo-keto reductase (NADP) activity | 2.00E-03 |
| 51 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.00E-03 |
| 52 | GO:0043022: ribosome binding | 2.00E-03 |
| 53 | GO:0016491: oxidoreductase activity | 2.07E-03 |
| 54 | GO:0008135: translation factor activity, RNA binding | 2.28E-03 |
| 55 | GO:0047617: acyl-CoA hydrolase activity | 2.88E-03 |
| 56 | GO:0016844: strictosidine synthase activity | 2.88E-03 |
| 57 | GO:0044183: protein binding involved in protein folding | 3.53E-03 |
| 58 | GO:0004177: aminopeptidase activity | 3.53E-03 |
| 59 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 3.87E-03 |
| 60 | GO:0031072: heat shock protein binding | 4.23E-03 |
| 61 | GO:0000155: phosphorelay sensor kinase activity | 4.23E-03 |
| 62 | GO:0008266: poly(U) RNA binding | 4.59E-03 |
| 63 | GO:0051082: unfolded protein binding | 4.86E-03 |
| 64 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.35E-03 |
| 65 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.35E-03 |
| 66 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.35E-03 |
| 67 | GO:0051536: iron-sulfur cluster binding | 5.75E-03 |
| 68 | GO:0004176: ATP-dependent peptidase activity | 6.56E-03 |
| 69 | GO:0003756: protein disulfide isomerase activity | 7.87E-03 |
| 70 | GO:0010181: FMN binding | 9.74E-03 |
| 71 | GO:0008168: methyltransferase activity | 1.25E-02 |
| 72 | GO:0008237: metallopeptidase activity | 1.28E-02 |
| 73 | GO:0000287: magnesium ion binding | 1.28E-02 |
| 74 | GO:0016788: hydrolase activity, acting on ester bonds | 1.33E-02 |
| 75 | GO:0005525: GTP binding | 1.73E-02 |
| 76 | GO:0016787: hydrolase activity | 1.73E-02 |
| 77 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.86E-02 |
| 78 | GO:0003746: translation elongation factor activity | 1.99E-02 |
| 79 | GO:0005198: structural molecule activity | 2.59E-02 |
| 80 | GO:0051287: NAD binding | 2.73E-02 |
| 81 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.94E-02 |
| 82 | GO:0003777: microtubule motor activity | 3.17E-02 |
| 83 | GO:0031625: ubiquitin protein ligase binding | 3.17E-02 |
| 84 | GO:0004672: protein kinase activity | 3.62E-02 |
| 85 | GO:0016887: ATPase activity | 3.70E-02 |
| 86 | GO:0016746: transferase activity, transferring acyl groups | 3.86E-02 |
| 87 | GO:0019843: rRNA binding | 4.44E-02 |
| 88 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 5.46E-27 |
| 5 | GO:0009941: chloroplast envelope | 1.07E-17 |
| 6 | GO:0009570: chloroplast stroma | 6.94E-13 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.46E-09 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 1.37E-08 |
| 9 | GO:0009534: chloroplast thylakoid | 9.73E-06 |
| 10 | GO:0009706: chloroplast inner membrane | 5.61E-05 |
| 11 | GO:0048046: apoplast | 6.80E-05 |
| 12 | GO:0010287: plastoglobule | 7.71E-05 |
| 13 | GO:0009782: photosystem I antenna complex | 1.08E-04 |
| 14 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.08E-04 |
| 15 | GO:0031357: integral component of chloroplast inner membrane | 2.52E-04 |
| 16 | GO:0030076: light-harvesting complex | 2.87E-04 |
| 17 | GO:0009509: chromoplast | 4.19E-04 |
| 18 | GO:0009579: thylakoid | 5.10E-04 |
| 19 | GO:0005960: glycine cleavage complex | 6.01E-04 |
| 20 | GO:0009501: amyloplast | 2.00E-03 |
| 21 | GO:0005777: peroxisome | 2.32E-03 |
| 22 | GO:0019013: viral nucleocapsid | 4.23E-03 |
| 23 | GO:0009508: plastid chromosome | 4.23E-03 |
| 24 | GO:0030095: chloroplast photosystem II | 4.59E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 6.15E-03 |
| 26 | GO:0005871: kinesin complex | 8.32E-03 |
| 27 | GO:0009522: photosystem I | 9.74E-03 |
| 28 | GO:0019898: extrinsic component of membrane | 1.02E-02 |
| 29 | GO:0009504: cell plate | 1.02E-02 |
| 30 | GO:0009523: photosystem II | 1.02E-02 |
| 31 | GO:0005694: chromosome | 1.12E-02 |
| 32 | GO:0010319: stromule | 1.28E-02 |
| 33 | GO:0009295: nucleoid | 1.28E-02 |
| 34 | GO:0030529: intracellular ribonucleoprotein complex | 1.39E-02 |
| 35 | GO:0019005: SCF ubiquitin ligase complex | 1.68E-02 |
| 36 | GO:0016020: membrane | 1.77E-02 |
| 37 | GO:0005819: spindle | 2.12E-02 |
| 38 | GO:0031977: thylakoid lumen | 2.25E-02 |
| 39 | GO:0009536: plastid | 2.90E-02 |
| 40 | GO:0009543: chloroplast thylakoid lumen | 4.44E-02 |
| 41 | GO:0005623: cell | 4.52E-02 |
| 42 | GO:0009524: phragmoplast | 4.61E-02 |