GO Enrichment Analysis of Co-expressed Genes with
AT4G17740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0042407: cristae formation | 0.00E+00 |
| 6 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 7 | GO:0006546: glycine catabolic process | 1.91E-06 |
| 8 | GO:0032544: plastid translation | 1.76E-05 |
| 9 | GO:0080183: response to photooxidative stress | 1.00E-04 |
| 10 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.00E-04 |
| 11 | GO:2001295: malonyl-CoA biosynthetic process | 1.73E-04 |
| 12 | GO:0006424: glutamyl-tRNA aminoacylation | 2.55E-04 |
| 13 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 2.55E-04 |
| 14 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.55E-04 |
| 15 | GO:0051781: positive regulation of cell division | 3.43E-04 |
| 16 | GO:0019464: glycine decarboxylation via glycine cleavage system | 3.43E-04 |
| 17 | GO:0044206: UMP salvage | 3.43E-04 |
| 18 | GO:0009658: chloroplast organization | 4.07E-04 |
| 19 | GO:0032543: mitochondrial translation | 4.37E-04 |
| 20 | GO:0031365: N-terminal protein amino acid modification | 4.37E-04 |
| 21 | GO:0043097: pyrimidine nucleoside salvage | 4.37E-04 |
| 22 | GO:0000304: response to singlet oxygen | 4.37E-04 |
| 23 | GO:0010190: cytochrome b6f complex assembly | 5.37E-04 |
| 24 | GO:0042549: photosystem II stabilization | 5.37E-04 |
| 25 | GO:0006555: methionine metabolic process | 5.37E-04 |
| 26 | GO:0006206: pyrimidine nucleobase metabolic process | 5.37E-04 |
| 27 | GO:0015979: photosynthesis | 6.32E-04 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 6.40E-04 |
| 29 | GO:0010555: response to mannitol | 6.40E-04 |
| 30 | GO:0042026: protein refolding | 6.40E-04 |
| 31 | GO:0006400: tRNA modification | 7.49E-04 |
| 32 | GO:0048564: photosystem I assembly | 8.61E-04 |
| 33 | GO:0009642: response to light intensity | 8.61E-04 |
| 34 | GO:0010206: photosystem II repair | 1.10E-03 |
| 35 | GO:0043067: regulation of programmed cell death | 1.22E-03 |
| 36 | GO:0035999: tetrahydrofolate interconversion | 1.22E-03 |
| 37 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.49E-03 |
| 38 | GO:0009773: photosynthetic electron transport in photosystem I | 1.49E-03 |
| 39 | GO:0009735: response to cytokinin | 1.58E-03 |
| 40 | GO:0045037: protein import into chloroplast stroma | 1.63E-03 |
| 41 | GO:0010207: photosystem II assembly | 1.92E-03 |
| 42 | GO:0010020: chloroplast fission | 1.92E-03 |
| 43 | GO:0019253: reductive pentose-phosphate cycle | 1.92E-03 |
| 44 | GO:0019344: cysteine biosynthetic process | 2.39E-03 |
| 45 | GO:0009116: nucleoside metabolic process | 2.39E-03 |
| 46 | GO:0006418: tRNA aminoacylation for protein translation | 2.55E-03 |
| 47 | GO:0031408: oxylipin biosynthetic process | 2.72E-03 |
| 48 | GO:0007005: mitochondrion organization | 2.89E-03 |
| 49 | GO:0006730: one-carbon metabolic process | 2.89E-03 |
| 50 | GO:0016117: carotenoid biosynthetic process | 3.42E-03 |
| 51 | GO:0000413: protein peptidyl-prolyl isomerization | 3.61E-03 |
| 52 | GO:0010197: polar nucleus fusion | 3.80E-03 |
| 53 | GO:0006342: chromatin silencing | 3.80E-03 |
| 54 | GO:0032502: developmental process | 4.58E-03 |
| 55 | GO:0010286: heat acclimation | 5.21E-03 |
| 56 | GO:0009627: systemic acquired resistance | 6.09E-03 |
| 57 | GO:0042128: nitrate assimilation | 6.09E-03 |
| 58 | GO:0015995: chlorophyll biosynthetic process | 6.31E-03 |
| 59 | GO:0048481: plant ovule development | 6.77E-03 |
| 60 | GO:0008219: cell death | 6.77E-03 |
| 61 | GO:0046686: response to cadmium ion | 7.55E-03 |
| 62 | GO:0009853: photorespiration | 7.99E-03 |
| 63 | GO:0006412: translation | 9.16E-03 |
| 64 | GO:0042538: hyperosmotic salinity response | 1.12E-02 |
| 65 | GO:0009793: embryo development ending in seed dormancy | 1.25E-02 |
| 66 | GO:0006096: glycolytic process | 1.32E-02 |
| 67 | GO:0048316: seed development | 1.35E-02 |
| 68 | GO:0006457: protein folding | 1.50E-02 |
| 69 | GO:0009790: embryo development | 1.97E-02 |
| 70 | GO:0006633: fatty acid biosynthetic process | 2.08E-02 |
| 71 | GO:0016036: cellular response to phosphate starvation | 2.12E-02 |
| 72 | GO:0006413: translational initiation | 2.12E-02 |
| 73 | GO:0042254: ribosome biogenesis | 3.08E-02 |
| 74 | GO:0009409: response to cold | 3.18E-02 |
| 75 | GO:0048366: leaf development | 3.41E-02 |
| 76 | GO:0009737: response to abscisic acid | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 5 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 4.04E-05 |
| 7 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 4.04E-05 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.04E-05 |
| 9 | GO:0005528: FK506 binding | 9.13E-05 |
| 10 | GO:0004618: phosphoglycerate kinase activity | 1.00E-04 |
| 11 | GO:0004047: aminomethyltransferase activity | 1.00E-04 |
| 12 | GO:0004817: cysteine-tRNA ligase activity | 1.00E-04 |
| 13 | GO:0019843: rRNA binding | 1.47E-04 |
| 14 | GO:0004075: biotin carboxylase activity | 1.73E-04 |
| 15 | GO:0030267: glyoxylate reductase (NADP) activity | 1.73E-04 |
| 16 | GO:0002161: aminoacyl-tRNA editing activity | 1.73E-04 |
| 17 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.55E-04 |
| 18 | GO:0004845: uracil phosphoribosyltransferase activity | 3.43E-04 |
| 19 | GO:0003989: acetyl-CoA carboxylase activity | 4.37E-04 |
| 20 | GO:0004849: uridine kinase activity | 6.40E-04 |
| 21 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 6.40E-04 |
| 22 | GO:0008235: metalloexopeptidase activity | 7.49E-04 |
| 23 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.93E-04 |
| 24 | GO:0004177: aminopeptidase activity | 1.49E-03 |
| 25 | GO:0044183: protein binding involved in protein folding | 1.49E-03 |
| 26 | GO:0000049: tRNA binding | 1.63E-03 |
| 27 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 2.72E-03 |
| 28 | GO:0004812: aminoacyl-tRNA ligase activity | 3.42E-03 |
| 29 | GO:0050662: coenzyme binding | 3.99E-03 |
| 30 | GO:0016853: isomerase activity | 3.99E-03 |
| 31 | GO:0008483: transaminase activity | 5.21E-03 |
| 32 | GO:0008236: serine-type peptidase activity | 6.54E-03 |
| 33 | GO:0003729: mRNA binding | 7.12E-03 |
| 34 | GO:0003746: translation elongation factor activity | 7.99E-03 |
| 35 | GO:0051539: 4 iron, 4 sulfur cluster binding | 8.75E-03 |
| 36 | GO:0003735: structural constituent of ribosome | 1.03E-02 |
| 37 | GO:0016740: transferase activity | 1.41E-02 |
| 38 | GO:0051082: unfolded protein binding | 1.51E-02 |
| 39 | GO:0005525: GTP binding | 1.91E-02 |
| 40 | GO:0004252: serine-type endopeptidase activity | 1.91E-02 |
| 41 | GO:0008565: protein transporter activity | 2.01E-02 |
| 42 | GO:0005509: calcium ion binding | 2.16E-02 |
| 43 | GO:0003743: translation initiation factor activity | 2.48E-02 |
| 44 | GO:0046982: protein heterodimerization activity | 2.99E-02 |
| 45 | GO:0042803: protein homodimerization activity | 4.16E-02 |
| 46 | GO:0005524: ATP binding | 4.90E-02 |
| 47 | GO:0009055: electron carrier activity | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.85E-34 |
| 2 | GO:0009570: chloroplast stroma | 1.82E-21 |
| 3 | GO:0009941: chloroplast envelope | 8.26E-20 |
| 4 | GO:0009579: thylakoid | 9.16E-14 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 2.06E-13 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 4.66E-11 |
| 7 | GO:0031977: thylakoid lumen | 1.31E-10 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 1.46E-06 |
| 9 | GO:0009534: chloroplast thylakoid | 3.61E-05 |
| 10 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 4.04E-05 |
| 11 | GO:0019898: extrinsic component of membrane | 2.26E-04 |
| 12 | GO:0005960: glycine cleavage complex | 2.55E-04 |
| 13 | GO:0010319: stromule | 3.14E-04 |
| 14 | GO:0005840: ribosome | 8.14E-04 |
| 15 | GO:0009539: photosystem II reaction center | 9.77E-04 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.10E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 1.36E-03 |
| 18 | GO:0022626: cytosolic ribosome | 1.67E-03 |
| 19 | GO:0000312: plastid small ribosomal subunit | 1.92E-03 |
| 20 | GO:0030659: cytoplasmic vesicle membrane | 1.92E-03 |
| 21 | GO:0030095: chloroplast photosystem II | 1.92E-03 |
| 22 | GO:0043234: protein complex | 2.23E-03 |
| 23 | GO:0000790: nuclear chromatin | 3.42E-03 |
| 24 | GO:0009523: photosystem II | 4.19E-03 |
| 25 | GO:0048046: apoplast | 5.31E-03 |
| 26 | GO:0009536: plastid | 5.57E-03 |
| 27 | GO:0000786: nucleosome | 7.74E-03 |
| 28 | GO:0005739: mitochondrion | 1.79E-02 |
| 29 | GO:0005623: cell | 1.80E-02 |
| 30 | GO:0005759: mitochondrial matrix | 2.08E-02 |
| 31 | GO:0022627: cytosolic small ribosomal subunit | 2.72E-02 |
| 32 | GO:0031969: chloroplast membrane | 3.54E-02 |