co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G17190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
2	GO:0006642: triglyceride mobilization	0.00E+00
3	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
4	GO:0006223: uracil salvage	0.00E+00
5	GO:0035674: tricarboxylic acid transmembrane transport	0.00E+00
6	GO:0010394: homogalacturonan metabolic process	0.00E+00
7	GO:0006399: tRNA metabolic process	0.00E+00
8	GO:0080094: response to trehalose-6-phosphate	0.00E+00
9	GO:0006633: fatty acid biosynthetic process	1.61E-07
10	GO:0006096: glycolytic process	1.39E-04
11	GO:0009658: chloroplast organization	1.43E-04
12	GO:0032544: plastid translation	1.72E-04
13	GO:0006169: adenosine salvage	1.77E-04
14	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	1.77E-04
15	GO:0045488: pectin metabolic process	1.77E-04
16	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	1.77E-04
17	GO:0006835: dicarboxylic acid transport	1.77E-04
18	GO:0071588: hydrogen peroxide mediated signaling pathway	1.77E-04
19	GO:0060627: regulation of vesicle-mediated transport	1.77E-04
20	GO:0019563: glycerol catabolic process	6.55E-04
21	GO:0006518: peptide metabolic process	6.55E-04
22	GO:0010253: UDP-rhamnose biosynthetic process	6.55E-04
23	GO:0006696: ergosterol biosynthetic process	6.55E-04
24	GO:2001295: malonyl-CoA biosynthetic process	6.55E-04
25	GO:0032504: multicellular organism reproduction	6.55E-04
26	GO:0090506: axillary shoot meristem initiation	6.55E-04
27	GO:0007017: microtubule-based process	7.64E-04
28	GO:0042254: ribosome biogenesis	9.27E-04
29	GO:0006165: nucleoside diphosphate phosphorylation	9.34E-04
30	GO:0006228: UTP biosynthetic process	9.34E-04
31	GO:0010088: phloem development	9.34E-04
32	GO:0016556: mRNA modification	9.34E-04
33	GO:2001141: regulation of RNA biosynthetic process	9.34E-04
34	GO:0051085: chaperone mediated protein folding requiring cofactor	9.34E-04
35	GO:0006241: CTP biosynthetic process	9.34E-04
36	GO:0006546: glycine catabolic process	1.24E-03
37	GO:0044206: UMP salvage	1.24E-03
38	GO:0006183: GTP biosynthetic process	1.24E-03
39	GO:0000413: protein peptidyl-prolyl isomerization	1.25E-03
40	GO:0006412: translation	1.40E-03
41	GO:0048359: mucilage metabolic process involved in seed coat development	1.57E-03
42	GO:0043097: pyrimidine nucleoside salvage	1.57E-03
43	GO:0010236: plastoquinone biosynthetic process	1.57E-03
44	GO:0044209: AMP salvage	1.57E-03
45	GO:0045454: cell redox homeostasis	1.63E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	1.94E-03
47	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.94E-03
48	GO:0006014: D-ribose metabolic process	1.94E-03
49	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.94E-03
50	GO:0006555: methionine metabolic process	1.94E-03
51	GO:0006457: protein folding	1.97E-03
52	GO:0010067: procambium histogenesis	2.32E-03
53	GO:0042026: protein refolding	2.32E-03
54	GO:1901259: chloroplast rRNA processing	2.32E-03
55	GO:0030488: tRNA methylation	2.32E-03
56	GO:0010189: vitamin E biosynthetic process	2.32E-03
57	GO:0010019: chloroplast-nucleus signaling pathway	2.32E-03
58	GO:0010555: response to mannitol	2.32E-03
59	GO:0009955: adaxial/abaxial pattern specification	2.32E-03
60	GO:0016126: sterol biosynthetic process	2.38E-03
61	GO:0015995: chlorophyll biosynthetic process	2.80E-03
62	GO:0055114: oxidation-reduction process	2.86E-03
63	GO:0009819: drought recovery	3.17E-03
64	GO:0009642: response to light intensity	3.17E-03
65	GO:0006875: cellular metal ion homeostasis	3.17E-03
66	GO:0009657: plastid organization	3.63E-03
67	GO:0071482: cellular response to light stimulus	3.63E-03
68	GO:0034599: cellular response to oxidative stress	4.09E-03
69	GO:0048589: developmental growth	4.10E-03
70	GO:0015780: nucleotide-sugar transport	4.10E-03
71	GO:0071555: cell wall organization	4.32E-03
72	GO:0006839: mitochondrial transport	4.45E-03
73	GO:0042761: very long-chain fatty acid biosynthetic process	4.60E-03
74	GO:0035999: tetrahydrofolate interconversion	4.60E-03
75	GO:0045036: protein targeting to chloroplast	5.11E-03
76	GO:0010192: mucilage biosynthetic process	5.11E-03
77	GO:0043085: positive regulation of catalytic activity	5.65E-03
78	GO:0006415: translational termination	5.65E-03
79	GO:0006352: DNA-templated transcription, initiation	5.65E-03
80	GO:0018119: peptidyl-cysteine S-nitrosylation	5.65E-03
81	GO:0009773: photosynthetic electron transport in photosystem I	5.65E-03
82	GO:0045037: protein import into chloroplast stroma	6.20E-03
83	GO:0006094: gluconeogenesis	6.78E-03
84	GO:0010020: chloroplast fission	7.37E-03
85	GO:0019253: reductive pentose-phosphate cycle	7.37E-03
86	GO:0010223: secondary shoot formation	7.37E-03
87	GO:0015979: photosynthesis	7.68E-03
88	GO:0010025: wax biosynthetic process	8.61E-03
89	GO:0007010: cytoskeleton organization	9.26E-03
90	GO:0019344: cysteine biosynthetic process	9.26E-03
91	GO:0009116: nucleoside metabolic process	9.26E-03
92	GO:0006418: tRNA aminoacylation for protein translation	9.92E-03
93	GO:0006629: lipid metabolic process	1.06E-02
94	GO:0006730: one-carbon metabolic process	1.13E-02
95	GO:0007005: mitochondrion organization	1.13E-02
96	GO:0030245: cellulose catabolic process	1.13E-02
97	GO:0009294: DNA mediated transformation	1.20E-02
98	GO:0009411: response to UV	1.20E-02
99	GO:0040007: growth	1.20E-02
100	GO:0001944: vasculature development	1.20E-02
101	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.20E-02
102	GO:0019722: calcium-mediated signaling	1.27E-02
103	GO:0010089: xylem development	1.27E-02
104	GO:0010214: seed coat development	1.27E-02
105	GO:0016117: carotenoid biosynthetic process	1.35E-02
106	GO:0042335: cuticle development	1.43E-02
107	GO:0080022: primary root development	1.43E-02
108	GO:0010087: phloem or xylem histogenesis	1.43E-02
109	GO:0006662: glycerol ether metabolic process	1.50E-02
110	GO:0045489: pectin biosynthetic process	1.50E-02
111	GO:0007018: microtubule-based movement	1.58E-02
112	GO:0019252: starch biosynthetic process	1.66E-02
113	GO:0071554: cell wall organization or biogenesis	1.75E-02
114	GO:0000302: response to reactive oxygen species	1.75E-02
115	GO:0016032: viral process	1.83E-02
116	GO:0032502: developmental process	1.83E-02
117	GO:0009828: plant-type cell wall loosening	2.00E-02
118	GO:0007267: cell-cell signaling	2.09E-02
119	GO:0010027: thylakoid membrane organization	2.27E-02
120	GO:0009627: systemic acquired resistance	2.45E-02
121	GO:0048481: plant ovule development	2.74E-02
122	GO:0008219: cell death	2.74E-02
123	GO:0009817: defense response to fungus, incompatible interaction	2.74E-02
124	GO:0048767: root hair elongation	2.84E-02
125	GO:0046686: response to cadmium ion	3.01E-02
126	GO:0009631: cold acclimation	3.04E-02
127	GO:0016051: carbohydrate biosynthetic process	3.24E-02
128	GO:0009637: response to blue light	3.24E-02
129	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.33E-02
130	GO:0006631: fatty acid metabolic process	3.67E-02
131	GO:0042542: response to hydrogen peroxide	3.78E-02
132	GO:0010114: response to red light	3.88E-02
133	GO:0008643: carbohydrate transport	4.11E-02
134	GO:0006869: lipid transport	4.21E-02
135	GO:0009664: plant-type cell wall organization	4.56E-02
136	GO:0042538: hyperosmotic salinity response	4.56E-02
137	GO:0009585: red, far-red light phototransduction	4.80E-02
138	GO:0051603: proteolysis involved in cellular protein catabolic process	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
2	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
3	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
4	GO:0050613: delta14-sterol reductase activity	0.00E+00
5	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
6	GO:0046905: phytoene synthase activity	0.00E+00
7	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
8	GO:0046408: chlorophyll synthetase activity	0.00E+00
9	GO:0015142: tricarboxylic acid transmembrane transporter activity	0.00E+00
10	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
11	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
12	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
13	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
14	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
15	GO:0019843: rRNA binding	2.62E-09
16	GO:0051920: peroxiredoxin activity	8.55E-07
17	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.52E-06
18	GO:0016209: antioxidant activity	2.14E-06
19	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.30E-05
20	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	1.77E-04
21	GO:0051996: squalene synthase activity	1.77E-04
22	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	1.77E-04
23	GO:0004001: adenosine kinase activity	1.77E-04
24	GO:0015088: copper uptake transmembrane transporter activity	1.77E-04
25	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.77E-04
26	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	1.77E-04
27	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.77E-04
28	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	1.77E-04
29	GO:0004807: triose-phosphate isomerase activity	1.77E-04
30	GO:0005200: structural constituent of cytoskeleton	2.01E-04
31	GO:0003735: structural constituent of ribosome	3.93E-04
32	GO:0050377: UDP-glucose 4,6-dehydratase activity	4.01E-04
33	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	4.01E-04
34	GO:0008460: dTDP-glucose 4,6-dehydratase activity	4.01E-04
35	GO:0004047: aminomethyltransferase activity	4.01E-04
36	GO:0010280: UDP-L-rhamnose synthase activity	4.01E-04
37	GO:0008805: carbon-monoxide oxygenase activity	4.01E-04
38	GO:0002161: aminoacyl-tRNA editing activity	6.55E-04
39	GO:0004148: dihydrolipoyl dehydrogenase activity	6.55E-04
40	GO:0004075: biotin carboxylase activity	6.55E-04
41	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	6.55E-04
42	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	6.55E-04
43	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.55E-04
44	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.68E-04
45	GO:0016149: translation release factor activity, codon specific	9.34E-04
46	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	9.34E-04
47	GO:0004550: nucleoside diphosphate kinase activity	9.34E-04
48	GO:0017077: oxidative phosphorylation uncoupler activity	9.34E-04
49	GO:0000254: C-4 methylsterol oxidase activity	9.34E-04
50	GO:0004659: prenyltransferase activity	1.24E-03
51	GO:0001053: plastid sigma factor activity	1.24E-03
52	GO:0004845: uracil phosphoribosyltransferase activity	1.24E-03
53	GO:0016836: hydro-lyase activity	1.24E-03
54	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.24E-03
55	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.24E-03
56	GO:0016987: sigma factor activity	1.24E-03
57	GO:1990137: plant seed peroxidase activity	1.24E-03
58	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.57E-03
59	GO:0003989: acetyl-CoA carboxylase activity	1.57E-03
60	GO:0004130: cytochrome-c peroxidase activity	1.94E-03
61	GO:0016688: L-ascorbate peroxidase activity	1.94E-03
62	GO:0003924: GTPase activity	2.25E-03
63	GO:0102391: decanoate--CoA ligase activity	2.32E-03
64	GO:0004747: ribokinase activity	2.32E-03
65	GO:0051753: mannan synthase activity	2.32E-03
66	GO:0004849: uridine kinase activity	2.32E-03
67	GO:0004467: long-chain fatty acid-CoA ligase activity	2.74E-03
68	GO:0016831: carboxy-lyase activity	2.74E-03
69	GO:0005525: GTP binding	3.00E-03
70	GO:0004033: aldo-keto reductase (NADP) activity	3.17E-03
71	GO:0008865: fructokinase activity	3.17E-03
72	GO:0004222: metalloendopeptidase activity	3.41E-03
73	GO:0008173: RNA methyltransferase activity	3.63E-03
74	GO:0003747: translation release factor activity	4.10E-03
75	GO:0047617: acyl-CoA hydrolase activity	4.60E-03
76	GO:0005381: iron ion transmembrane transporter activity	4.60E-03
77	GO:0004601: peroxidase activity	4.93E-03
78	GO:0008047: enzyme activator activity	5.11E-03
79	GO:0043621: protein self-association	5.44E-03
80	GO:0044183: protein binding involved in protein folding	5.65E-03
81	GO:0047372: acylglycerol lipase activity	5.65E-03
82	GO:0000049: tRNA binding	6.20E-03
83	GO:0008081: phosphoric diester hydrolase activity	6.78E-03
84	GO:0031072: heat shock protein binding	6.78E-03
85	GO:0004565: beta-galactosidase activity	6.78E-03
86	GO:0016491: oxidoreductase activity	6.99E-03
87	GO:0008266: poly(U) RNA binding	7.37E-03
88	GO:0042803: protein homodimerization activity	8.65E-03
89	GO:0051082: unfolded protein binding	9.66E-03
90	GO:0004176: ATP-dependent peptidase activity	1.06E-02
91	GO:0033612: receptor serine/threonine kinase binding	1.06E-02
92	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.06E-02
93	GO:0008810: cellulase activity	1.20E-02
94	GO:0008514: organic anion transmembrane transporter activity	1.27E-02
95	GO:0047134: protein-disulfide reductase activity	1.35E-02
96	GO:0004812: aminoacyl-tRNA ligase activity	1.35E-02
97	GO:0005102: receptor binding	1.35E-02
98	GO:0004791: thioredoxin-disulfide reductase activity	1.58E-02
99	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.91E-02
100	GO:0008237: metallopeptidase activity	2.09E-02
101	GO:0008483: transaminase activity	2.09E-02
102	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.09E-02
103	GO:0042802: identical protein binding	2.13E-02
104	GO:0016413: O-acetyltransferase activity	2.18E-02
105	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.64E-02
106	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.74E-02
107	GO:0016740: transferase activity	2.82E-02
108	GO:0004185: serine-type carboxypeptidase activity	3.88E-02
109	GO:0051537: 2 iron, 2 sulfur cluster binding	4.11E-02
110	GO:0005198: structural molecule activity	4.22E-02
111	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0009507: chloroplast	4.64E-34
3	GO:0009941: chloroplast envelope	2.20E-27
4	GO:0009570: chloroplast stroma	3.33E-25
5	GO:0009579: thylakoid	2.54E-11
6	GO:0009534: chloroplast thylakoid	4.43E-10
7	GO:0009535: chloroplast thylakoid membrane	7.43E-08
8	GO:0005840: ribosome	1.18E-06
9	GO:0048046: apoplast	7.05E-06
10	GO:0031977: thylakoid lumen	5.08E-05
11	GO:0005618: cell wall	5.25E-05
12	GO:0009547: plastid ribosome	1.77E-04
13	GO:0045298: tubulin complex	2.09E-04
14	GO:0022626: cytosolic ribosome	2.50E-04
15	GO:0009543: chloroplast thylakoid lumen	2.78E-04
16	GO:0000311: plastid large ribosomal subunit	3.93E-04
17	GO:0045254: pyruvate dehydrogenase complex	4.01E-04
18	GO:0009536: plastid	4.66E-04
19	GO:0009505: plant-type cell wall	4.90E-04
20	GO:0009654: photosystem II oxygen evolving complex	7.64E-04
21	GO:0031897: Tic complex	1.24E-03
22	GO:0010319: stromule	2.12E-03
23	GO:0009533: chloroplast stromal thylakoid	2.74E-03
24	GO:0009539: photosystem II reaction center	3.63E-03
25	GO:0005811: lipid particle	3.63E-03
26	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.10E-03
27	GO:0005763: mitochondrial small ribosomal subunit	4.10E-03
28	GO:0005874: microtubule	6.21E-03
29	GO:0031969: chloroplast membrane	6.49E-03
30	GO:0030659: cytoplasmic vesicle membrane	7.37E-03
31	GO:0030095: chloroplast photosystem II	7.37E-03
32	GO:0030176: integral component of endoplasmic reticulum membrane	7.98E-03
33	GO:0009706: chloroplast inner membrane	9.66E-03
34	GO:0042651: thylakoid membrane	9.92E-03
35	GO:0015935: small ribosomal subunit	1.06E-02
36	GO:0009532: plastid stroma	1.06E-02
37	GO:0005802: trans-Golgi network	1.10E-02
38	GO:0010287: plastoglobule	1.15E-02
39	GO:0005768: endosome	1.33E-02
40	GO:0005871: kinesin complex	1.35E-02
41	GO:0019898: extrinsic component of membrane	1.66E-02
42	GO:0016020: membrane	1.76E-02
43	GO:0005615: extracellular space	1.88E-02
44	GO:0046658: anchored component of plasma membrane	2.22E-02
45	GO:0000139: Golgi membrane	2.45E-02
46	GO:0009707: chloroplast outer membrane	2.74E-02
47	GO:0015934: large ribosomal subunit	3.04E-02
48	GO:0005794: Golgi apparatus	3.05E-02
49	GO:0009506: plasmodesma	3.33E-02
50	GO:0005856: cytoskeleton	4.22E-02
51	GO:0005743: mitochondrial inner membrane	4.40E-02