GO Enrichment Analysis of Co-expressed Genes with
AT4G16650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 2 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.57E-06 |
| 3 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 8.12E-06 |
| 4 | GO:0010028: xanthophyll cycle | 3.50E-05 |
| 5 | GO:0034337: RNA folding | 3.50E-05 |
| 6 | GO:0010207: photosystem II assembly | 5.08E-05 |
| 7 | GO:0035304: regulation of protein dephosphorylation | 8.78E-05 |
| 8 | GO:0018026: peptidyl-lysine monomethylation | 8.78E-05 |
| 9 | GO:0016122: xanthophyll metabolic process | 8.78E-05 |
| 10 | GO:1902448: positive regulation of shade avoidance | 1.52E-04 |
| 11 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 1.52E-04 |
| 12 | GO:0051604: protein maturation | 1.52E-04 |
| 13 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.25E-04 |
| 14 | GO:0010027: thylakoid membrane organization | 2.94E-04 |
| 15 | GO:0015994: chlorophyll metabolic process | 3.05E-04 |
| 16 | GO:0010021: amylopectin biosynthetic process | 3.05E-04 |
| 17 | GO:0032957: inositol trisphosphate metabolic process | 3.89E-04 |
| 18 | GO:0042549: photosystem II stabilization | 4.78E-04 |
| 19 | GO:1901259: chloroplast rRNA processing | 5.70E-04 |
| 20 | GO:0009772: photosynthetic electron transport in photosystem II | 6.66E-04 |
| 21 | GO:0045292: mRNA cis splicing, via spliceosome | 7.68E-04 |
| 22 | GO:0006605: protein targeting | 7.68E-04 |
| 23 | GO:0048564: photosystem I assembly | 7.68E-04 |
| 24 | GO:0006364: rRNA processing | 8.23E-04 |
| 25 | GO:0032544: plastid translation | 8.71E-04 |
| 26 | GO:0000373: Group II intron splicing | 9.78E-04 |
| 27 | GO:0010205: photoinhibition | 1.09E-03 |
| 28 | GO:0009638: phototropism | 1.09E-03 |
| 29 | GO:0019684: photosynthesis, light reaction | 1.32E-03 |
| 30 | GO:0009073: aromatic amino acid family biosynthetic process | 1.32E-03 |
| 31 | GO:0046856: phosphatidylinositol dephosphorylation | 1.32E-03 |
| 32 | GO:0009785: blue light signaling pathway | 1.57E-03 |
| 33 | GO:0010025: wax biosynthetic process | 1.97E-03 |
| 34 | GO:0009451: RNA modification | 1.99E-03 |
| 35 | GO:0016998: cell wall macromolecule catabolic process | 2.41E-03 |
| 36 | GO:0009686: gibberellin biosynthetic process | 2.71E-03 |
| 37 | GO:0010268: brassinosteroid homeostasis | 3.36E-03 |
| 38 | GO:0019252: starch biosynthetic process | 3.70E-03 |
| 39 | GO:0016132: brassinosteroid biosynthetic process | 3.88E-03 |
| 40 | GO:0016032: viral process | 4.06E-03 |
| 41 | GO:0030163: protein catabolic process | 4.24E-03 |
| 42 | GO:0016125: sterol metabolic process | 4.42E-03 |
| 43 | GO:0009607: response to biotic stimulus | 5.18E-03 |
| 44 | GO:0010411: xyloglucan metabolic process | 5.58E-03 |
| 45 | GO:0006631: fatty acid metabolic process | 7.95E-03 |
| 46 | GO:0042546: cell wall biogenesis | 8.65E-03 |
| 47 | GO:0016310: phosphorylation | 1.07E-02 |
| 48 | GO:0009742: brassinosteroid mediated signaling pathway | 1.38E-02 |
| 49 | GO:0007166: cell surface receptor signaling pathway | 2.15E-02 |
| 50 | GO:0042254: ribosome biogenesis | 2.71E-02 |
| 51 | GO:0006869: lipid transport | 3.78E-02 |
| 52 | GO:0007165: signal transduction | 4.07E-02 |
| 53 | GO:0006629: lipid metabolic process | 4.11E-02 |
| 54 | GO:0009408: response to heat | 4.11E-02 |
| 55 | GO:0009737: response to abscisic acid | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0005048: signal sequence binding | 0.00E+00 |
| 4 | GO:0010242: oxygen evolving activity | 3.50E-05 |
| 5 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.50E-05 |
| 6 | GO:0051777: ent-kaurenoate oxidase activity | 3.50E-05 |
| 7 | GO:0004856: xylulokinase activity | 3.50E-05 |
| 8 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.50E-05 |
| 9 | GO:0033201: alpha-1,4-glucan synthase activity | 8.78E-05 |
| 10 | GO:0004373: glycogen (starch) synthase activity | 1.52E-04 |
| 11 | GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity | 1.52E-04 |
| 12 | GO:0004751: ribose-5-phosphate isomerase activity | 1.52E-04 |
| 13 | GO:0047325: inositol tetrakisphosphate 1-kinase activity | 1.52E-04 |
| 14 | GO:0019201: nucleotide kinase activity | 2.25E-04 |
| 15 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 2.25E-04 |
| 16 | GO:0016851: magnesium chelatase activity | 2.25E-04 |
| 17 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 2.25E-04 |
| 18 | GO:0009011: starch synthase activity | 3.05E-04 |
| 19 | GO:0016279: protein-lysine N-methyltransferase activity | 3.05E-04 |
| 20 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 3.89E-04 |
| 21 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 4.78E-04 |
| 22 | GO:0004017: adenylate kinase activity | 5.70E-04 |
| 23 | GO:0008312: 7S RNA binding | 7.68E-04 |
| 24 | GO:0043022: ribosome binding | 7.68E-04 |
| 25 | GO:0019843: rRNA binding | 1.42E-03 |
| 26 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 1.44E-03 |
| 27 | GO:0008266: poly(U) RNA binding | 1.70E-03 |
| 28 | GO:0004190: aspartic-type endopeptidase activity | 1.84E-03 |
| 29 | GO:0005525: GTP binding | 2.63E-03 |
| 30 | GO:0000287: magnesium ion binding | 2.93E-03 |
| 31 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.88E-03 |
| 32 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 5.58E-03 |
| 33 | GO:0008236: serine-type peptidase activity | 5.78E-03 |
| 34 | GO:0004519: endonuclease activity | 5.91E-03 |
| 35 | GO:0003746: translation elongation factor activity | 7.05E-03 |
| 36 | GO:0003723: RNA binding | 1.28E-02 |
| 37 | GO:0008026: ATP-dependent helicase activity | 1.38E-02 |
| 38 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.86E-02 |
| 39 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.32E-02 |
| 40 | GO:0005515: protein binding | 2.63E-02 |
| 41 | GO:0003729: mRNA binding | 2.92E-02 |
| 42 | GO:0008233: peptidase activity | 3.08E-02 |
| 43 | GO:0004871: signal transducer activity | 3.66E-02 |
| 44 | GO:0003924: GTPase activity | 4.11E-02 |
| 45 | GO:0016787: hydrolase activity | 4.19E-02 |
| 46 | GO:0009055: electron carrier activity | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.57E-15 |
| 2 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.40E-05 |
| 3 | GO:0009534: chloroplast thylakoid | 2.35E-05 |
| 4 | GO:0030095: chloroplast photosystem II | 5.08E-05 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 5.36E-05 |
| 6 | GO:0080085: signal recognition particle, chloroplast targeting | 8.78E-05 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.13E-04 |
| 8 | GO:0009526: plastid envelope | 3.05E-04 |
| 9 | GO:0055035: plastid thylakoid membrane | 3.89E-04 |
| 10 | GO:0031977: thylakoid lumen | 5.72E-04 |
| 11 | GO:0009570: chloroplast stroma | 5.97E-04 |
| 12 | GO:0009501: amyloplast | 7.68E-04 |
| 13 | GO:0010287: plastoglobule | 1.35E-03 |
| 14 | GO:0032040: small-subunit processome | 1.44E-03 |
| 15 | GO:0009508: plastid chromosome | 1.57E-03 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 2.26E-03 |
| 17 | GO:0019898: extrinsic component of membrane | 3.70E-03 |
| 18 | GO:0009295: nucleoid | 4.60E-03 |
| 19 | GO:0043231: intracellular membrane-bounded organelle | 5.99E-03 |
| 20 | GO:0005840: ribosome | 2.05E-02 |
| 21 | GO:0009536: plastid | 2.40E-02 |
| 22 | GO:0009941: chloroplast envelope | 2.43E-02 |