GO Enrichment Analysis of Co-expressed Genes with
AT4G15930
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098586: cellular response to virus | 0.00E+00 |
| 2 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 1.40E-10 |
| 7 | GO:0005986: sucrose biosynthetic process | 4.58E-06 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.93E-06 |
| 9 | GO:0071484: cellular response to light intensity | 4.93E-06 |
| 10 | GO:0009735: response to cytokinin | 3.55E-05 |
| 11 | GO:0010196: nonphotochemical quenching | 4.52E-05 |
| 12 | GO:0009704: de-etiolation | 5.89E-05 |
| 13 | GO:0048564: photosystem I assembly | 5.89E-05 |
| 14 | GO:0051775: response to redox state | 1.02E-04 |
| 15 | GO:0071277: cellular response to calcium ion | 1.02E-04 |
| 16 | GO:0080093: regulation of photorespiration | 1.02E-04 |
| 17 | GO:0031998: regulation of fatty acid beta-oxidation | 1.02E-04 |
| 18 | GO:0006810: transport | 1.09E-04 |
| 19 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.56E-04 |
| 20 | GO:0006108: malate metabolic process | 2.09E-04 |
| 21 | GO:0006094: gluconeogenesis | 2.09E-04 |
| 22 | GO:0009767: photosynthetic electron transport chain | 2.09E-04 |
| 23 | GO:0019253: reductive pentose-phosphate cycle | 2.37E-04 |
| 24 | GO:0046741: transport of virus in host, tissue to tissue | 2.40E-04 |
| 25 | GO:0071457: cellular response to ozone | 2.40E-04 |
| 26 | GO:0080005: photosystem stoichiometry adjustment | 2.40E-04 |
| 27 | GO:0097054: L-glutamate biosynthetic process | 2.40E-04 |
| 28 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.40E-04 |
| 29 | GO:0009658: chloroplast organization | 2.78E-04 |
| 30 | GO:0031022: nuclear migration along microfilament | 3.99E-04 |
| 31 | GO:0006000: fructose metabolic process | 3.99E-04 |
| 32 | GO:0000913: preprophase band assembly | 3.99E-04 |
| 33 | GO:0016226: iron-sulfur cluster assembly | 4.41E-04 |
| 34 | GO:0009409: response to cold | 4.56E-04 |
| 35 | GO:0015979: photosynthesis | 4.82E-04 |
| 36 | GO:0006107: oxaloacetate metabolic process | 5.73E-04 |
| 37 | GO:0016556: mRNA modification | 5.73E-04 |
| 38 | GO:0006537: glutamate biosynthetic process | 5.73E-04 |
| 39 | GO:0043572: plastid fission | 5.73E-04 |
| 40 | GO:0046836: glycolipid transport | 5.73E-04 |
| 41 | GO:0006020: inositol metabolic process | 5.73E-04 |
| 42 | GO:0042631: cellular response to water deprivation | 6.09E-04 |
| 43 | GO:0006109: regulation of carbohydrate metabolic process | 7.62E-04 |
| 44 | GO:0045727: positive regulation of translation | 7.62E-04 |
| 45 | GO:0006021: inositol biosynthetic process | 7.62E-04 |
| 46 | GO:0006734: NADH metabolic process | 7.62E-04 |
| 47 | GO:0019676: ammonia assimilation cycle | 7.62E-04 |
| 48 | GO:0071486: cellular response to high light intensity | 7.62E-04 |
| 49 | GO:0030163: protein catabolic process | 9.07E-04 |
| 50 | GO:0071493: cellular response to UV-B | 9.62E-04 |
| 51 | GO:0043097: pyrimidine nucleoside salvage | 9.62E-04 |
| 52 | GO:0010117: photoprotection | 9.62E-04 |
| 53 | GO:0009904: chloroplast accumulation movement | 9.62E-04 |
| 54 | GO:0006097: glyoxylate cycle | 9.62E-04 |
| 55 | GO:0006206: pyrimidine nucleobase metabolic process | 1.17E-03 |
| 56 | GO:0046855: inositol phosphate dephosphorylation | 1.17E-03 |
| 57 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.17E-03 |
| 58 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.17E-03 |
| 59 | GO:0055114: oxidation-reduction process | 1.19E-03 |
| 60 | GO:0009903: chloroplast avoidance movement | 1.40E-03 |
| 61 | GO:0009854: oxidative photosynthetic carbon pathway | 1.40E-03 |
| 62 | GO:0009645: response to low light intensity stimulus | 1.65E-03 |
| 63 | GO:0009853: photorespiration | 1.85E-03 |
| 64 | GO:0009642: response to light intensity | 1.90E-03 |
| 65 | GO:0006099: tricarboxylic acid cycle | 1.94E-03 |
| 66 | GO:0071482: cellular response to light stimulus | 2.17E-03 |
| 67 | GO:0019430: removal of superoxide radicals | 2.17E-03 |
| 68 | GO:0032544: plastid translation | 2.17E-03 |
| 69 | GO:0006002: fructose 6-phosphate metabolic process | 2.17E-03 |
| 70 | GO:0006098: pentose-phosphate shunt | 2.45E-03 |
| 71 | GO:0009821: alkaloid biosynthetic process | 2.45E-03 |
| 72 | GO:0010206: photosystem II repair | 2.45E-03 |
| 73 | GO:0034765: regulation of ion transmembrane transport | 2.45E-03 |
| 74 | GO:0090333: regulation of stomatal closure | 2.45E-03 |
| 75 | GO:0000373: Group II intron splicing | 2.45E-03 |
| 76 | GO:0080167: response to karrikin | 2.47E-03 |
| 77 | GO:0009644: response to high light intensity | 2.57E-03 |
| 78 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.58E-03 |
| 79 | GO:0010205: photoinhibition | 2.74E-03 |
| 80 | GO:0045036: protein targeting to chloroplast | 3.05E-03 |
| 81 | GO:0043085: positive regulation of catalytic activity | 3.36E-03 |
| 82 | GO:0000272: polysaccharide catabolic process | 3.36E-03 |
| 83 | GO:0005983: starch catabolic process | 3.69E-03 |
| 84 | GO:0006790: sulfur compound metabolic process | 3.69E-03 |
| 85 | GO:0006096: glycolytic process | 3.77E-03 |
| 86 | GO:0010628: positive regulation of gene expression | 4.02E-03 |
| 87 | GO:0010020: chloroplast fission | 4.37E-03 |
| 88 | GO:0010207: photosystem II assembly | 4.37E-03 |
| 89 | GO:0005985: sucrose metabolic process | 4.72E-03 |
| 90 | GO:0046854: phosphatidylinositol phosphorylation | 4.72E-03 |
| 91 | GO:0042742: defense response to bacterium | 4.91E-03 |
| 92 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.85E-03 |
| 93 | GO:0051302: regulation of cell division | 5.85E-03 |
| 94 | GO:0009058: biosynthetic process | 5.97E-03 |
| 95 | GO:0006730: one-carbon metabolic process | 6.64E-03 |
| 96 | GO:0006508: proteolysis | 8.02E-03 |
| 97 | GO:0042391: regulation of membrane potential | 8.35E-03 |
| 98 | GO:0009611: response to wounding | 8.61E-03 |
| 99 | GO:0071472: cellular response to salt stress | 8.80E-03 |
| 100 | GO:0006520: cellular amino acid metabolic process | 8.80E-03 |
| 101 | GO:0006662: glycerol ether metabolic process | 8.80E-03 |
| 102 | GO:0015986: ATP synthesis coupled proton transport | 9.26E-03 |
| 103 | GO:0007018: microtubule-based movement | 9.26E-03 |
| 104 | GO:0006814: sodium ion transport | 9.26E-03 |
| 105 | GO:0010468: regulation of gene expression | 9.32E-03 |
| 106 | GO:0046686: response to cadmium ion | 9.61E-03 |
| 107 | GO:0009791: post-embryonic development | 9.73E-03 |
| 108 | GO:0019252: starch biosynthetic process | 9.73E-03 |
| 109 | GO:0000302: response to reactive oxygen species | 1.02E-02 |
| 110 | GO:0016032: viral process | 1.07E-02 |
| 111 | GO:0071805: potassium ion transmembrane transport | 1.22E-02 |
| 112 | GO:0000910: cytokinesis | 1.27E-02 |
| 113 | GO:0016126: sterol biosynthetic process | 1.32E-02 |
| 114 | GO:0010027: thylakoid membrane organization | 1.32E-02 |
| 115 | GO:0009816: defense response to bacterium, incompatible interaction | 1.38E-02 |
| 116 | GO:0009817: defense response to fungus, incompatible interaction | 1.60E-02 |
| 117 | GO:0030244: cellulose biosynthetic process | 1.60E-02 |
| 118 | GO:0018298: protein-chromophore linkage | 1.60E-02 |
| 119 | GO:0034599: cellular response to oxidative stress | 1.95E-02 |
| 120 | GO:0032259: methylation | 2.13E-02 |
| 121 | GO:0009744: response to sucrose | 2.26E-02 |
| 122 | GO:0006855: drug transmembrane transport | 2.52E-02 |
| 123 | GO:0009664: plant-type cell wall organization | 2.66E-02 |
| 124 | GO:0006364: rRNA processing | 2.80E-02 |
| 125 | GO:0006417: regulation of translation | 3.01E-02 |
| 126 | GO:0043086: negative regulation of catalytic activity | 3.15E-02 |
| 127 | GO:0005975: carbohydrate metabolic process | 3.45E-02 |
| 128 | GO:0009416: response to light stimulus | 3.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 6 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 7 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 8 | GO:0050307: sucrose-phosphate phosphatase activity | 2.08E-06 |
| 9 | GO:0051861: glycolipid binding | 9.35E-06 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.35E-06 |
| 11 | GO:0016615: malate dehydrogenase activity | 2.35E-05 |
| 12 | GO:0030060: L-malate dehydrogenase activity | 3.34E-05 |
| 13 | GO:0048038: quinone binding | 4.54E-05 |
| 14 | GO:0050308: sugar-phosphatase activity | 1.02E-04 |
| 15 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.02E-04 |
| 16 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.02E-04 |
| 17 | GO:0019203: carbohydrate phosphatase activity | 1.02E-04 |
| 18 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.02E-04 |
| 19 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.02E-04 |
| 20 | GO:0030941: chloroplast targeting sequence binding | 1.02E-04 |
| 21 | GO:0035671: enone reductase activity | 1.02E-04 |
| 22 | GO:0004222: metalloendopeptidase activity | 1.37E-04 |
| 23 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.40E-04 |
| 24 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.40E-04 |
| 25 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.40E-04 |
| 26 | GO:0008967: phosphoglycolate phosphatase activity | 2.40E-04 |
| 27 | GO:0010297: heteropolysaccharide binding | 2.40E-04 |
| 28 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.40E-04 |
| 29 | GO:0051536: iron-sulfur cluster binding | 3.32E-04 |
| 30 | GO:0032947: protein complex scaffold | 3.99E-04 |
| 31 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 3.99E-04 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 4.03E-04 |
| 33 | GO:0008508: bile acid:sodium symporter activity | 5.73E-04 |
| 34 | GO:0017089: glycolipid transporter activity | 5.73E-04 |
| 35 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 7.62E-04 |
| 36 | GO:0004506: squalene monooxygenase activity | 7.62E-04 |
| 37 | GO:0009011: starch synthase activity | 7.62E-04 |
| 38 | GO:0005319: lipid transporter activity | 7.62E-04 |
| 39 | GO:0051538: 3 iron, 4 sulfur cluster binding | 9.62E-04 |
| 40 | GO:0004784: superoxide dismutase activity | 1.17E-03 |
| 41 | GO:2001070: starch binding | 1.17E-03 |
| 42 | GO:0004332: fructose-bisphosphate aldolase activity | 1.17E-03 |
| 43 | GO:0016168: chlorophyll binding | 1.20E-03 |
| 44 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.40E-03 |
| 45 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.40E-03 |
| 46 | GO:0004849: uridine kinase activity | 1.40E-03 |
| 47 | GO:0005242: inward rectifier potassium channel activity | 1.40E-03 |
| 48 | GO:0015078: hydrogen ion transmembrane transporter activity | 2.17E-03 |
| 49 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.45E-03 |
| 50 | GO:0016844: strictosidine synthase activity | 2.74E-03 |
| 51 | GO:0008047: enzyme activator activity | 3.05E-03 |
| 52 | GO:0047372: acylglycerol lipase activity | 3.36E-03 |
| 53 | GO:0004089: carbonate dehydratase activity | 4.02E-03 |
| 54 | GO:0031072: heat shock protein binding | 4.02E-03 |
| 55 | GO:0008266: poly(U) RNA binding | 4.37E-03 |
| 56 | GO:0031409: pigment binding | 5.09E-03 |
| 57 | GO:0005528: FK506 binding | 5.46E-03 |
| 58 | GO:0004857: enzyme inhibitor activity | 5.46E-03 |
| 59 | GO:0043424: protein histidine kinase binding | 5.85E-03 |
| 60 | GO:0022891: substrate-specific transmembrane transporter activity | 7.06E-03 |
| 61 | GO:0016491: oxidoreductase activity | 7.45E-03 |
| 62 | GO:0003756: protein disulfide isomerase activity | 7.48E-03 |
| 63 | GO:0047134: protein-disulfide reductase activity | 7.91E-03 |
| 64 | GO:0030551: cyclic nucleotide binding | 8.35E-03 |
| 65 | GO:0005249: voltage-gated potassium channel activity | 8.35E-03 |
| 66 | GO:0050662: coenzyme binding | 9.26E-03 |
| 67 | GO:0004791: thioredoxin-disulfide reductase activity | 9.26E-03 |
| 68 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.12E-02 |
| 69 | GO:0008168: methyltransferase activity | 1.16E-02 |
| 70 | GO:0046872: metal ion binding | 1.16E-02 |
| 71 | GO:0000287: magnesium ion binding | 1.19E-02 |
| 72 | GO:0008237: metallopeptidase activity | 1.22E-02 |
| 73 | GO:0050660: flavin adenine dinucleotide binding | 1.40E-02 |
| 74 | GO:0008233: peptidase activity | 1.48E-02 |
| 75 | GO:0016787: hydrolase activity | 1.55E-02 |
| 76 | GO:0015238: drug transmembrane transporter activity | 1.65E-02 |
| 77 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.77E-02 |
| 78 | GO:0003824: catalytic activity | 2.30E-02 |
| 79 | GO:0009055: electron carrier activity | 2.38E-02 |
| 80 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.39E-02 |
| 81 | GO:0005198: structural molecule activity | 2.46E-02 |
| 82 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.52E-02 |
| 83 | GO:0051287: NAD binding | 2.59E-02 |
| 84 | GO:0003777: microtubule motor activity | 3.01E-02 |
| 85 | GO:0016887: ATPase activity | 3.44E-02 |
| 86 | GO:0016874: ligase activity | 3.44E-02 |
| 87 | GO:0051082: unfolded protein binding | 3.59E-02 |
| 88 | GO:0015035: protein disulfide oxidoreductase activity | 3.67E-02 |
| 89 | GO:0019843: rRNA binding | 4.22E-02 |
| 90 | GO:0016829: lyase activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0042579: microbody | 0.00E+00 |
| 3 | GO:0009571: proplastid stroma | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 4.50E-35 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 8.88E-23 |
| 6 | GO:0009941: chloroplast envelope | 8.19E-17 |
| 7 | GO:0009570: chloroplast stroma | 1.35E-16 |
| 8 | GO:0009534: chloroplast thylakoid | 7.42E-15 |
| 9 | GO:0009579: thylakoid | 1.86E-13 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.05E-11 |
| 11 | GO:0010319: stromule | 2.01E-06 |
| 12 | GO:0048046: apoplast | 8.61E-06 |
| 13 | GO:0009782: photosystem I antenna complex | 1.02E-04 |
| 14 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 1.02E-04 |
| 15 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.02E-04 |
| 16 | GO:0009707: chloroplast outer membrane | 1.19E-04 |
| 17 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.40E-04 |
| 18 | GO:0009706: chloroplast inner membrane | 5.54E-04 |
| 19 | GO:0010287: plastoglobule | 6.87E-04 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 7.34E-04 |
| 21 | GO:0009517: PSII associated light-harvesting complex II | 7.62E-04 |
| 22 | GO:0009512: cytochrome b6f complex | 9.62E-04 |
| 23 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.17E-03 |
| 24 | GO:0031359: integral component of chloroplast outer membrane | 1.65E-03 |
| 25 | GO:0005777: peroxisome | 2.07E-03 |
| 26 | GO:0031977: thylakoid lumen | 2.19E-03 |
| 27 | GO:0009508: plastid chromosome | 4.02E-03 |
| 28 | GO:0030095: chloroplast photosystem II | 4.37E-03 |
| 29 | GO:0030076: light-harvesting complex | 4.72E-03 |
| 30 | GO:0005623: cell | 5.81E-03 |
| 31 | GO:0009654: photosystem II oxygen evolving complex | 5.85E-03 |
| 32 | GO:0016020: membrane | 6.54E-03 |
| 33 | GO:0005871: kinesin complex | 7.91E-03 |
| 34 | GO:0016021: integral component of membrane | 8.03E-03 |
| 35 | GO:0009504: cell plate | 9.73E-03 |
| 36 | GO:0009523: photosystem II | 9.73E-03 |
| 37 | GO:0019898: extrinsic component of membrane | 9.73E-03 |
| 38 | GO:0005694: chromosome | 1.07E-02 |
| 39 | GO:0009295: nucleoid | 1.22E-02 |
| 40 | GO:0030529: intracellular ribonucleoprotein complex | 1.32E-02 |
| 41 | GO:0005819: spindle | 2.01E-02 |
| 42 | GO:0009536: plastid | 2.65E-02 |
| 43 | GO:0009524: phragmoplast | 4.38E-02 |
| 44 | GO:0005759: mitochondrial matrix | 4.95E-02 |