Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G15560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
2GO:1902171: regulation of tocopherol cyclase activity0.00E+00
3GO:0090706: specification of plant organ position0.00E+00
4GO:1901918: negative regulation of exoribonuclease activity0.00E+00
5GO:0033231: carbohydrate export0.00E+00
6GO:0015995: chlorophyll biosynthetic process2.90E-06
7GO:0010450: inflorescence meristem growth1.87E-05
8GO:1902334: fructose export from vacuole to cytoplasm1.87E-05
9GO:0015755: fructose transport1.87E-05
10GO:0000476: maturation of 4.5S rRNA1.87E-05
11GO:0000967: rRNA 5'-end processing1.87E-05
12GO:0046467: membrane lipid biosynthetic process1.87E-05
13GO:0090342: regulation of cell aging4.85E-05
14GO:0034470: ncRNA processing4.85E-05
15GO:0045165: cell fate commitment8.61E-05
16GO:0015979: photosynthesis1.77E-04
17GO:0009765: photosynthesis, light harvesting1.78E-04
18GO:0051205: protein insertion into membrane1.78E-04
19GO:0045038: protein import into chloroplast thylakoid membrane2.30E-04
20GO:1902183: regulation of shoot apical meristem development2.30E-04
21GO:0010158: abaxial cell fate specification2.30E-04
22GO:0010114: response to red light2.87E-04
23GO:0010189: vitamin E biosynthetic process3.42E-04
24GO:0010019: chloroplast-nucleus signaling pathway3.42E-04
25GO:0009645: response to low light intensity stimulus4.02E-04
26GO:0009772: photosynthetic electron transport in photosystem II4.02E-04
27GO:0009769: photosynthesis, light harvesting in photosystem II4.02E-04
28GO:0050821: protein stabilization4.64E-04
29GO:0010093: specification of floral organ identity5.27E-04
30GO:0009657: plastid organization5.27E-04
31GO:2000024: regulation of leaf development5.93E-04
32GO:0009051: pentose-phosphate shunt, oxidative branch5.93E-04
33GO:0006995: cellular response to nitrogen starvation7.30E-04
34GO:0043085: positive regulation of catalytic activity8.02E-04
35GO:0009750: response to fructose8.02E-04
36GO:0009698: phenylpropanoid metabolic process8.02E-04
37GO:0040008: regulation of growth8.78E-04
38GO:0007623: circadian rhythm9.17E-04
39GO:0009933: meristem structural organization1.02E-03
40GO:0010030: positive regulation of seed germination1.10E-03
41GO:0009944: polarity specification of adaxial/abaxial axis1.26E-03
42GO:0009768: photosynthesis, light harvesting in photosystem I1.35E-03
43GO:0051260: protein homooligomerization1.44E-03
44GO:0009269: response to desiccation1.44E-03
45GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.80E-03
46GO:0070417: cellular response to cold1.80E-03
47GO:0042631: cellular response to water deprivation1.89E-03
48GO:0009741: response to brassinosteroid1.99E-03
49GO:0010154: fruit development1.99E-03
50GO:0009646: response to absence of light2.09E-03
51GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.29E-03
52GO:0010193: response to ozone2.29E-03
53GO:0010027: thylakoid membrane organization2.94E-03
54GO:0009734: auxin-activated signaling pathway3.50E-03
55GO:0018298: protein-chromophore linkage3.51E-03
56GO:0010218: response to far red light3.76E-03
57GO:0009637: response to blue light4.13E-03
58GO:0034599: cellular response to oxidative stress4.26E-03
59GO:0009640: photomorphogenesis4.91E-03
60GO:0009644: response to high light intensity5.18E-03
61GO:0010224: response to UV-B6.17E-03
62GO:0009909: regulation of flower development6.46E-03
63GO:0006417: regulation of translation6.46E-03
64GO:0009740: gibberellic acid mediated signaling pathway7.38E-03
65GO:0006396: RNA processing7.85E-03
66GO:0009742: brassinosteroid mediated signaling pathway8.01E-03
67GO:0009409: response to cold1.21E-02
68GO:0009826: unidimensional cell growth1.50E-02
69GO:0009658: chloroplast organization1.54E-02
70GO:0009723: response to ethylene1.70E-02
71GO:0007275: multicellular organism development1.76E-02
72GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.83E-02
73GO:0032259: methylation2.29E-02
74GO:0006629: lipid metabolic process2.36E-02
75GO:0006397: mRNA processing2.43E-02
76GO:0009416: response to light stimulus3.55E-02
77GO:0009611: response to wounding3.61E-02
RankGO TermAdjusted P value
1GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
2GO:0015284: fructose uniporter activity0.00E+00
3GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
4GO:0045550: geranylgeranyl reductase activity0.00E+00
5GO:0046906: tetrapyrrole binding1.87E-05
6GO:0005353: fructose transmembrane transporter activity4.85E-05
7GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity4.85E-05
8GO:0017057: 6-phosphogluconolactonase activity1.30E-04
9GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.30E-04
10GO:0019899: enzyme binding4.02E-04
11GO:0051119: sugar transmembrane transporter activity1.10E-03
12GO:0031409: pigment binding1.18E-03
13GO:0003727: single-stranded RNA binding1.70E-03
14GO:0016168: chlorophyll binding3.05E-03
15GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.51E-03
16GO:0005515: protein binding3.71E-03
17GO:0004185: serine-type carboxypeptidase activity4.91E-03
18GO:0043621: protein self-association5.18E-03
19GO:0016298: lipase activity6.17E-03
20GO:0008168: methyltransferase activity1.50E-02
21GO:0046982: protein heterodimerization activity1.52E-02
22GO:0008289: lipid binding2.99E-02
23GO:0046872: metal ion binding3.83E-02
RankGO TermAdjusted P value
1GO:0009534: chloroplast thylakoid3.20E-06
2GO:0009941: chloroplast envelope3.70E-06
3GO:0009507: chloroplast5.67E-06
4GO:0009535: chloroplast thylakoid membrane5.71E-06
5GO:0031969: chloroplast membrane1.47E-04
6GO:0009517: PSII associated light-harvesting complex II1.78E-04
7GO:0010287: plastoglobule6.42E-04
8GO:0016602: CCAAT-binding factor complex9.49E-04
9GO:0030095: chloroplast photosystem II1.02E-03
10GO:0030076: light-harvesting complex1.10E-03
11GO:0009522: photosystem I2.09E-03
12GO:0009523: photosystem II2.19E-03
13GO:0016021: integral component of membrane3.64E-03
14GO:0009706: chloroplast inner membrane7.69E-03
15GO:0009543: chloroplast thylakoid lumen8.99E-03
16GO:0005623: cell9.16E-03
17GO:0009705: plant-type vacuole membrane1.13E-02
18GO:0009579: thylakoid4.04E-02
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Gene type



Gene DE type