Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G14230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
2GO:0010378: temperature compensation of the circadian clock0.00E+00
3GO:0009768: photosynthesis, light harvesting in photosystem I1.58E-18
4GO:0018298: protein-chromophore linkage2.12E-13
5GO:0009645: response to low light intensity stimulus7.56E-11
6GO:0015979: photosynthesis2.34E-09
7GO:0010218: response to far red light4.21E-09
8GO:0009644: response to high light intensity1.58E-08
9GO:0009769: photosynthesis, light harvesting in photosystem II3.55E-08
10GO:0009409: response to cold8.75E-08
11GO:0010114: response to red light8.59E-07
12GO:0009416: response to light stimulus1.15E-06
13GO:0000380: alternative mRNA splicing, via spliceosome3.07E-06
14GO:0007623: circadian rhythm1.16E-05
15GO:0009637: response to blue light2.47E-05
16GO:0042542: response to hydrogen peroxide3.47E-05
17GO:0015812: gamma-aminobutyric acid transport3.90E-05
18GO:0032958: inositol phosphate biosynthetic process3.90E-05
19GO:1990641: response to iron ion starvation3.90E-05
20GO:0006101: citrate metabolic process9.72E-05
21GO:0051170: nuclear import9.72E-05
22GO:0048511: rhythmic process1.08E-04
23GO:0010017: red or far-red light signaling pathway1.20E-04
24GO:0006598: polyamine catabolic process1.68E-04
25GO:0009735: response to cytokinin2.03E-04
26GO:0006020: inositol metabolic process2.48E-04
27GO:0044211: CTP salvage2.48E-04
28GO:0030104: water homeostasis3.33E-04
29GO:0009765: photosynthesis, light harvesting3.33E-04
30GO:0010600: regulation of auxin biosynthetic process3.33E-04
31GO:0044206: UMP salvage3.33E-04
32GO:0048578: positive regulation of long-day photoperiodism, flowering4.25E-04
33GO:0043097: pyrimidine nucleoside salvage4.25E-04
34GO:0000160: phosphorelay signal transduction system4.61E-04
35GO:0010119: regulation of stomatal movement5.06E-04
36GO:0010043: response to zinc ion5.06E-04
37GO:0009635: response to herbicide5.22E-04
38GO:0006206: pyrimidine nucleobase metabolic process5.22E-04
39GO:0045087: innate immune response5.52E-04
40GO:0009861: jasmonic acid and ethylene-dependent systemic resistance6.22E-04
41GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.22E-04
42GO:0010161: red light signaling pathway7.28E-04
43GO:1900056: negative regulation of leaf senescence7.28E-04
44GO:0008643: carbohydrate transport7.60E-04
45GO:0009704: de-etiolation8.37E-04
46GO:0032508: DNA duplex unwinding8.37E-04
47GO:0006102: isocitrate metabolic process8.37E-04
48GO:0010928: regulation of auxin mediated signaling pathway8.37E-04
49GO:0009585: red, far-red light phototransduction9.36E-04
50GO:0010099: regulation of photomorphogenesis9.50E-04
51GO:0009827: plant-type cell wall modification9.50E-04
52GO:0009651: response to salt stress9.79E-04
53GO:0090333: regulation of stomatal closure1.07E-03
54GO:0048354: mucilage biosynthetic process involved in seed coat development1.19E-03
55GO:0010380: regulation of chlorophyll biosynthetic process1.19E-03
56GO:0055062: phosphate ion homeostasis1.31E-03
57GO:0009641: shade avoidance1.31E-03
58GO:0009970: cellular response to sulfate starvation1.31E-03
59GO:0006995: cellular response to nitrogen starvation1.31E-03
60GO:0009718: anthocyanin-containing compound biosynthetic process1.72E-03
61GO:0009266: response to temperature stimulus1.86E-03
62GO:0009737: response to abscisic acid2.21E-03
63GO:0055085: transmembrane transport2.26E-03
64GO:0006406: mRNA export from nucleus2.32E-03
65GO:0003333: amino acid transmembrane transport2.64E-03
66GO:0009269: response to desiccation2.64E-03
67GO:0071215: cellular response to abscisic acid stimulus2.97E-03
68GO:0045492: xylan biosynthetic process3.15E-03
69GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.32E-03
70GO:0009658: chloroplast organization3.42E-03
71GO:0010501: RNA secondary structure unwinding3.50E-03
72GO:0006970: response to osmotic stress3.68E-03
73GO:0006814: sodium ion transport3.87E-03
74GO:0042752: regulation of circadian rhythm3.87E-03
75GO:0080167: response to karrikin4.23E-03
76GO:0000302: response to reactive oxygen species4.26E-03
77GO:1901657: glycosyl compound metabolic process4.65E-03
78GO:0045892: negative regulation of transcription, DNA-templated5.13E-03
79GO:0010029: regulation of seed germination5.69E-03
80GO:0015995: chlorophyll biosynthetic process6.13E-03
81GO:0009817: defense response to fungus, incompatible interaction6.58E-03
82GO:0009910: negative regulation of flower development7.27E-03
83GO:0006355: regulation of transcription, DNA-templated7.78E-03
84GO:0006099: tricarboxylic acid cycle7.99E-03
85GO:0009640: photomorphogenesis9.25E-03
86GO:0007165: signal transduction1.03E-02
87GO:0006812: cation transport1.09E-02
88GO:0035556: intracellular signal transduction1.17E-02
89GO:0009909: regulation of flower development1.23E-02
90GO:0009624: response to nematode1.46E-02
91GO:0055114: oxidation-reduction process1.61E-02
92GO:0009058: biosynthetic process1.78E-02
93GO:0042744: hydrogen peroxide catabolic process1.88E-02
94GO:0006351: transcription, DNA-templated2.00E-02
95GO:0016036: cellular response to phosphate starvation2.05E-02
96GO:0009414: response to water deprivation2.19E-02
97GO:0010228: vegetative to reproductive phase transition of meristem2.23E-02
98GO:0009739: response to gibberellin2.34E-02
99GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.34E-02
100GO:0010468: regulation of gene expression2.45E-02
101GO:0005975: carbohydrate metabolic process3.41E-02
102GO:0046686: response to cadmium ion3.50E-02
103GO:0010200: response to chitin3.51E-02
104GO:0044550: secondary metabolite biosynthetic process3.64E-02
105GO:0032259: methylation4.39E-02
106GO:0006629: lipid metabolic process4.53E-02
107GO:0009753: response to jasmonic acid4.76E-02
108GO:0008152: metabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0031409: pigment binding5.71E-19
8GO:0016168: chlorophyll binding5.11E-16
9GO:0015185: gamma-aminobutyric acid transmembrane transporter activity3.90E-05
10GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.90E-05
11GO:0000829: inositol heptakisphosphate kinase activity3.90E-05
12GO:0080079: cellobiose glucosidase activity3.90E-05
13GO:0000828: inositol hexakisphosphate kinase activity3.90E-05
14GO:0015180: L-alanine transmembrane transporter activity9.72E-05
15GO:0003994: aconitate hydratase activity9.72E-05
16GO:0004096: catalase activity1.68E-04
17GO:0046592: polyamine oxidase activity1.68E-04
18GO:0015189: L-lysine transmembrane transporter activity2.48E-04
19GO:0048027: mRNA 5'-UTR binding2.48E-04
20GO:0015181: arginine transmembrane transporter activity2.48E-04
21GO:0000156: phosphorelay response regulator activity2.65E-04
22GO:0004845: uracil phosphoribosyltransferase activity3.33E-04
23GO:0005313: L-glutamate transmembrane transporter activity3.33E-04
24GO:0015562: efflux transmembrane transporter activity5.22E-04
25GO:0004849: uridine kinase activity6.22E-04
26GO:0046872: metal ion binding9.13E-04
27GO:0005515: protein binding9.57E-04
28GO:0000989: transcription factor activity, transcription factor binding1.07E-03
29GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.07E-03
30GO:0047372: acylglycerol lipase activity1.44E-03
31GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.67E-03
32GO:0004022: alcohol dehydrogenase (NAD) activity1.72E-03
33GO:0005315: inorganic phosphate transmembrane transporter activity1.72E-03
34GO:0004565: beta-galactosidase activity1.72E-03
35GO:0008131: primary amine oxidase activity1.86E-03
36GO:0015297: antiporter activity2.13E-03
37GO:0005351: sugar:proton symporter activity2.18E-03
38GO:0008324: cation transmembrane transporter activity2.48E-03
39GO:0004707: MAP kinase activity2.64E-03
40GO:0008514: organic anion transmembrane transporter activity3.15E-03
41GO:0004497: monooxygenase activity4.23E-03
42GO:0102483: scopolin beta-glucosidase activity6.13E-03
43GO:0003729: mRNA binding6.73E-03
44GO:0020037: heme binding7.25E-03
45GO:0050897: cobalt ion binding7.27E-03
46GO:0003697: single-stranded DNA binding7.75E-03
47GO:0008422: beta-glucosidase activity8.24E-03
48GO:0051539: 4 iron, 4 sulfur cluster binding8.48E-03
49GO:0015293: symporter activity1.00E-02
50GO:0005198: structural molecule activity1.00E-02
51GO:0008270: zinc ion binding1.12E-02
52GO:0003690: double-stranded DNA binding1.17E-02
53GO:0015171: amino acid transmembrane transporter activity1.23E-02
54GO:0016874: ligase activity1.40E-02
55GO:0022857: transmembrane transporter activity1.40E-02
56GO:0019825: oxygen binding1.58E-02
57GO:0015144: carbohydrate transmembrane transporter activity1.95E-02
58GO:0005506: iron ion binding2.21E-02
59GO:0008168: methyltransferase activity2.86E-02
60GO:0061630: ubiquitin protein ligase activity3.56E-02
61GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.12E-02
RankGO TermAdjusted P value
1GO:0030076: light-harvesting complex1.59E-16
2GO:0009522: photosystem I9.72E-15
3GO:0010287: plastoglobule4.01E-13
4GO:0009579: thylakoid1.03E-10
5GO:0009523: photosystem II4.25E-10
6GO:0009534: chloroplast thylakoid3.37E-09
7GO:0009535: chloroplast thylakoid membrane3.78E-08
8GO:0009941: chloroplast envelope8.77E-07
9GO:0016020: membrane1.54E-05
10GO:0042651: thylakoid membrane9.72E-05
11GO:0016021: integral component of membrane1.43E-04
12GO:0005777: peroxisome2.95E-04
13GO:0009517: PSII associated light-harvesting complex II3.33E-04
14GO:0009507: chloroplast5.03E-04
15GO:0048046: apoplast1.12E-03
16GO:0005618: cell wall1.30E-03
17GO:0022626: cytosolic ribosome1.06E-02
18GO:0031966: mitochondrial membrane1.09E-02
19GO:0016607: nuclear speck1.31E-02
20GO:0005654: nucleoplasm1.68E-02
21GO:0005623: cell1.75E-02
22GO:0009505: plant-type cell wall2.82E-02
23GO:0005773: vacuole3.35E-02
24GO:0009506: plasmodesma3.44E-02
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Gene type



Gene DE type