co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G13820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0080053: response to phenylalanine	0.00E+00
4	GO:0006983: ER overload response	0.00E+00
5	GO:0006793: phosphorus metabolic process	0.00E+00
6	GO:0051238: sequestering of metal ion	0.00E+00
7	GO:0051553: flavone biosynthetic process	0.00E+00
8	GO:0006182: cGMP biosynthetic process	0.00E+00
9	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
10	GO:0010055: atrichoblast differentiation	0.00E+00
11	GO:0043201: response to leucine	0.00E+00
12	GO:0042742: defense response to bacterium	6.98E-10
13	GO:0006952: defense response	8.02E-09
14	GO:0009620: response to fungus	3.42E-07
15	GO:0009617: response to bacterium	4.17E-07
16	GO:0009751: response to salicylic acid	1.02E-06
17	GO:0006468: protein phosphorylation	2.69E-06
18	GO:0043069: negative regulation of programmed cell death	2.81E-05
19	GO:0002239: response to oomycetes	3.30E-05
20	GO:0009817: defense response to fungus, incompatible interaction	9.65E-05
21	GO:0006874: cellular calcium ion homeostasis	1.29E-04
22	GO:0002238: response to molecule of fungal origin	1.36E-04
23	GO:0071456: cellular response to hypoxia	1.69E-04
24	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.02E-04
25	GO:0046244: salicylic acid catabolic process	3.02E-04
26	GO:0032491: detection of molecule of fungal origin	3.02E-04
27	GO:0032107: regulation of response to nutrient levels	3.02E-04
28	GO:0051938: L-glutamate import	3.02E-04
29	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.02E-04
30	GO:0007165: signal transduction	3.22E-04
31	GO:0010120: camalexin biosynthetic process	3.75E-04
32	GO:0002229: defense response to oomycetes	3.93E-04
33	GO:0006212: uracil catabolic process	6.60E-04
34	GO:0002240: response to molecule of oomycetes origin	6.60E-04
35	GO:0043066: negative regulation of apoptotic process	6.60E-04
36	GO:0019483: beta-alanine biosynthetic process	6.60E-04
37	GO:0042939: tripeptide transport	6.60E-04
38	GO:0043091: L-arginine import	6.60E-04
39	GO:0051592: response to calcium ion	6.60E-04
40	GO:0080183: response to photooxidative stress	6.60E-04
41	GO:0015802: basic amino acid transport	6.60E-04
42	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	6.60E-04
43	GO:0009682: induced systemic resistance	7.19E-04
44	GO:0009627: systemic acquired resistance	7.27E-04
45	GO:0006790: sulfur compound metabolic process	8.22E-04
46	GO:0012501: programmed cell death	8.22E-04
47	GO:0050832: defense response to fungus	8.91E-04
48	GO:0002237: response to molecule of bacterial origin	1.04E-03
49	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.07E-03
50	GO:0010351: lithium ion transport	1.07E-03
51	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.07E-03
52	GO:0046854: phosphatidylinositol phosphorylation	1.17E-03
53	GO:0010150: leaf senescence	1.47E-03
54	GO:0006882: cellular zinc ion homeostasis	1.53E-03
55	GO:0019438: aromatic compound biosynthetic process	1.53E-03
56	GO:0042542: response to hydrogen peroxide	1.55E-03
57	GO:0016998: cell wall macromolecule catabolic process	1.74E-03
58	GO:0042938: dipeptide transport	2.06E-03
59	GO:0009697: salicylic acid biosynthetic process	2.63E-03
60	GO:0018344: protein geranylgeranylation	2.63E-03
61	GO:1900425: negative regulation of defense response to bacterium	3.24E-03
62	GO:0006561: proline biosynthetic process	3.24E-03
63	GO:0010942: positive regulation of cell death	3.24E-03
64	GO:0015691: cadmium ion transport	3.24E-03
65	GO:0010256: endomembrane system organization	3.24E-03
66	GO:0042372: phylloquinone biosynthetic process	3.90E-03
67	GO:0010555: response to mannitol	3.90E-03
68	GO:2000067: regulation of root morphogenesis	3.90E-03
69	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.90E-03
70	GO:0010200: response to chitin	4.20E-03
71	GO:0019745: pentacyclic triterpenoid biosynthetic process	4.60E-03
72	GO:0030026: cellular manganese ion homeostasis	4.60E-03
73	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.60E-03
74	GO:1900056: negative regulation of leaf senescence	4.60E-03
75	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.35E-03
76	GO:1900150: regulation of defense response to fungus	5.35E-03
77	GO:0009850: auxin metabolic process	5.35E-03
78	GO:0043068: positive regulation of programmed cell death	5.35E-03
79	GO:0007186: G-protein coupled receptor signaling pathway	6.13E-03
80	GO:0010204: defense response signaling pathway, resistance gene-independent	6.13E-03
81	GO:0043562: cellular response to nitrogen levels	6.13E-03
82	GO:0009699: phenylpropanoid biosynthetic process	6.13E-03
83	GO:0008219: cell death	6.61E-03
84	GO:0009813: flavonoid biosynthetic process	6.94E-03
85	GO:0009821: alkaloid biosynthetic process	6.95E-03
86	GO:0051865: protein autoubiquitination	6.95E-03
87	GO:0007338: single fertilization	6.95E-03
88	GO:0009407: toxin catabolic process	7.29E-03
89	GO:0048527: lateral root development	7.65E-03
90	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.80E-03
91	GO:0008202: steroid metabolic process	7.80E-03
92	GO:0055062: phosphate ion homeostasis	8.70E-03
93	GO:0007064: mitotic sister chromatid cohesion	8.70E-03
94	GO:0006032: chitin catabolic process	8.70E-03
95	GO:0007166: cell surface receptor signaling pathway	8.89E-03
96	GO:0052544: defense response by callose deposition in cell wall	9.63E-03
97	GO:0019684: photosynthesis, light reaction	9.63E-03
98	GO:0009089: lysine biosynthetic process via diaminopimelate	9.63E-03
99	GO:0009750: response to fructose	9.63E-03
100	GO:0000038: very long-chain fatty acid metabolic process	9.63E-03
101	GO:0002213: defense response to insect	1.06E-02
102	GO:0006807: nitrogen compound metabolic process	1.16E-02
103	GO:0006626: protein targeting to mitochondrion	1.16E-02
104	GO:0009718: anthocyanin-containing compound biosynthetic process	1.16E-02
105	GO:0009636: response to toxic substance	1.22E-02
106	GO:0010143: cutin biosynthetic process	1.26E-02
107	GO:0006855: drug transmembrane transport	1.27E-02
108	GO:0006812: cation transport	1.36E-02
109	GO:0042538: hyperosmotic salinity response	1.36E-02
110	GO:0070588: calcium ion transmembrane transport	1.37E-02
111	GO:0009809: lignin biosynthetic process	1.46E-02
112	GO:0010025: wax biosynthetic process	1.48E-02
113	GO:0000162: tryptophan biosynthetic process	1.48E-02
114	GO:0030150: protein import into mitochondrial matrix	1.59E-02
115	GO:0080147: root hair cell development	1.59E-02
116	GO:0005992: trehalose biosynthetic process	1.59E-02
117	GO:0006487: protein N-linked glycosylation	1.59E-02
118	GO:0006979: response to oxidative stress	1.67E-02
119	GO:0003333: amino acid transmembrane transport	1.82E-02
120	GO:0030433: ubiquitin-dependent ERAD pathway	1.95E-02
121	GO:0031348: negative regulation of defense response	1.95E-02
122	GO:0019748: secondary metabolic process	1.95E-02
123	GO:0055114: oxidation-reduction process	1.98E-02
124	GO:0010227: floral organ abscission	2.07E-02
125	GO:0010118: stomatal movement	2.46E-02
126	GO:0042631: cellular response to water deprivation	2.46E-02
127	GO:0006885: regulation of pH	2.59E-02
128	GO:0032259: methylation	2.66E-02
129	GO:0048544: recognition of pollen	2.73E-02
130	GO:0006814: sodium ion transport	2.73E-02
131	GO:0042752: regulation of circadian rhythm	2.73E-02
132	GO:0009749: response to glucose	2.87E-02
133	GO:0009851: auxin biosynthetic process	2.87E-02
134	GO:0006623: protein targeting to vacuole	2.87E-02
135	GO:0010193: response to ozone	3.01E-02
136	GO:0016032: viral process	3.16E-02
137	GO:0009630: gravitropism	3.16E-02
138	GO:0030163: protein catabolic process	3.31E-02
139	GO:0010252: auxin homeostasis	3.46E-02
140	GO:0009567: double fertilization forming a zygote and endosperm	3.46E-02
141	GO:0006904: vesicle docking involved in exocytosis	3.61E-02
142	GO:0009615: response to virus	3.92E-02
143	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.03E-02
144	GO:0009816: defense response to bacterium, incompatible interaction	4.07E-02
145	GO:0009607: response to biotic stimulus	4.07E-02
146	GO:0016311: dephosphorylation	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0033759: flavone synthase activity	0.00E+00
4	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
5	GO:0003837: beta-ureidopropionase activity	0.00E+00
6	GO:0051670: inulinase activity	0.00E+00
7	GO:0016301: kinase activity	2.36E-06
8	GO:0004674: protein serine/threonine kinase activity	3.27E-06
9	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.48E-05
10	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.26E-04
11	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.85E-04
12	GO:0005524: ATP binding	2.08E-04
13	GO:0051669: fructan beta-fructosidase activity	3.02E-04
14	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.02E-04
15	GO:0008909: isochorismate synthase activity	3.02E-04
16	GO:0031219: levanase activity	3.02E-04
17	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.02E-04
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	3.02E-04
19	GO:0008171: O-methyltransferase activity	6.23E-04
20	GO:0032934: sterol binding	6.60E-04
21	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	6.60E-04
22	GO:0042937: tripeptide transporter activity	6.60E-04
23	GO:0004103: choline kinase activity	6.60E-04
24	GO:0004566: beta-glucuronidase activity	6.60E-04
25	GO:0031683: G-protein beta/gamma-subunit complex binding	1.07E-03
26	GO:0004663: Rab geranylgeranyltransferase activity	1.07E-03
27	GO:0004383: guanylate cyclase activity	1.07E-03
28	GO:0001664: G-protein coupled receptor binding	1.07E-03
29	GO:0005217: intracellular ligand-gated ion channel activity	1.17E-03
30	GO:0004970: ionotropic glutamate receptor activity	1.17E-03
31	GO:0004190: aspartic-type endopeptidase activity	1.17E-03
32	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.18E-03
33	GO:0015181: arginine transmembrane transporter activity	1.53E-03
34	GO:0042299: lupeol synthase activity	1.53E-03
35	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.53E-03
36	GO:0015189: L-lysine transmembrane transporter activity	1.53E-03
37	GO:0009055: electron carrier activity	1.99E-03
38	GO:0005313: L-glutamate transmembrane transporter activity	2.06E-03
39	GO:0016866: intramolecular transferase activity	2.06E-03
40	GO:0004576: oligosaccharyl transferase activity	2.06E-03
41	GO:0010279: indole-3-acetic acid amido synthetase activity	2.06E-03
42	GO:0015368: calcium:cation antiporter activity	2.06E-03
43	GO:0004834: tryptophan synthase activity	2.06E-03
44	GO:0042936: dipeptide transporter activity	2.06E-03
45	GO:0015369: calcium:proton antiporter activity	2.06E-03
46	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.63E-03
47	GO:0004040: amidase activity	2.63E-03
48	GO:0005496: steroid binding	2.63E-03
49	GO:0045431: flavonol synthase activity	2.63E-03
50	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.24E-03
51	GO:0004866: endopeptidase inhibitor activity	3.24E-03
52	GO:0050660: flavin adenine dinucleotide binding	3.59E-03
53	GO:0102391: decanoate--CoA ligase activity	3.90E-03
54	GO:0004602: glutathione peroxidase activity	3.90E-03
55	GO:0004656: procollagen-proline 4-dioxygenase activity	3.90E-03
56	GO:0004467: long-chain fatty acid-CoA ligase activity	4.60E-03
57	GO:0052747: sinapyl alcohol dehydrogenase activity	5.35E-03
58	GO:0015491: cation:cation antiporter activity	5.35E-03
59	GO:0030247: polysaccharide binding	5.97E-03
60	GO:0008142: oxysterol binding	6.13E-03
61	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.28E-03
62	GO:0015238: drug transmembrane transporter activity	6.94E-03
63	GO:0003678: DNA helicase activity	6.95E-03
64	GO:0015174: basic amino acid transmembrane transporter activity	7.80E-03
65	GO:0016844: strictosidine synthase activity	7.80E-03
66	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	7.80E-03
67	GO:0030246: carbohydrate binding	8.12E-03
68	GO:0004568: chitinase activity	8.70E-03
69	GO:0008559: xenobiotic-transporting ATPase activity	9.63E-03
70	GO:0005516: calmodulin binding	9.86E-03
71	GO:0046872: metal ion binding	1.04E-02
72	GO:0004364: glutathione transferase activity	1.04E-02
73	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.06E-02
74	GO:0015266: protein channel activity	1.16E-02
75	GO:0004022: alcohol dehydrogenase (NAD) activity	1.16E-02
76	GO:0005388: calcium-transporting ATPase activity	1.16E-02
77	GO:0005509: calcium ion binding	1.43E-02
78	GO:0001046: core promoter sequence-specific DNA binding	1.59E-02
79	GO:0031418: L-ascorbic acid binding	1.59E-02
80	GO:0003954: NADH dehydrogenase activity	1.59E-02
81	GO:0015035: protein disulfide oxidoreductase activity	2.15E-02
82	GO:0008514: organic anion transmembrane transporter activity	2.20E-02
83	GO:0005451: monovalent cation:proton antiporter activity	2.46E-02
84	GO:0008080: N-acetyltransferase activity	2.59E-02
85	GO:0015299: solute:proton antiporter activity	2.73E-02
86	GO:0004842: ubiquitin-protein transferase activity	2.84E-02
87	GO:0015385: sodium:proton antiporter activity	3.31E-02
88	GO:0015297: antiporter activity	3.44E-02
89	GO:0020037: heme binding	3.54E-02
90	GO:0008483: transaminase activity	3.61E-02
91	GO:0008237: metallopeptidase activity	3.61E-02
92	GO:0051213: dioxygenase activity	3.92E-02
93	GO:0004004: ATP-dependent RNA helicase activity	4.40E-02
94	GO:0004683: calmodulin-dependent protein kinase activity	4.40E-02
95	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.73E-02
96	GO:0044212: transcription regulatory region DNA binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	9.24E-08
2	GO:0005783: endoplasmic reticulum	8.51E-05
3	GO:0005886: plasma membrane	2.38E-04
4	GO:0031304: intrinsic component of mitochondrial inner membrane	6.60E-04
5	GO:0005765: lysosomal membrane	7.19E-04
6	GO:0070062: extracellular exosome	1.53E-03
7	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.53E-03
8	GO:0030660: Golgi-associated vesicle membrane	2.06E-03
9	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.06E-03
10	GO:0008250: oligosaccharyltransferase complex	2.63E-03
11	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.35E-03
12	GO:0031305: integral component of mitochondrial inner membrane	5.35E-03
13	GO:0000325: plant-type vacuole	7.65E-03
14	GO:0005576: extracellular region	8.35E-03
15	GO:0031966: mitochondrial membrane	1.36E-02
16	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.20E-02
17	GO:0005770: late endosome	2.59E-02
18	GO:0019898: extrinsic component of membrane	2.87E-02
19	GO:0000145: exocyst	3.16E-02
20	GO:0009705: plant-type vacuole membrane	3.61E-02
21	GO:0010319: stromule	3.61E-02
22	GO:0009707: chloroplast outer membrane	4.73E-02