co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
2	GO:0080094: response to trehalose-6-phosphate	0.00E+00
3	GO:0042407: cristae formation	0.00E+00
4	GO:0007638: mechanosensory behavior	0.00E+00
5	GO:0006169: adenosine salvage	7.07E-05
6	GO:0010442: guard cell morphogenesis	7.07E-05
7	GO:0071370: cellular response to gibberellin stimulus	7.07E-05
8	GO:0010480: microsporocyte differentiation	7.07E-05
9	GO:0006438: valyl-tRNA aminoacylation	7.07E-05
10	GO:0043039: tRNA aminoacylation	1.70E-04
11	GO:0052541: plant-type cell wall cellulose metabolic process	1.70E-04
12	GO:0006423: cysteinyl-tRNA aminoacylation	1.70E-04
13	GO:0006418: tRNA aminoacylation for protein translation	2.22E-04
14	GO:2001295: malonyl-CoA biosynthetic process	2.86E-04
15	GO:0006065: UDP-glucuronate biosynthetic process	2.86E-04
16	GO:0090506: axillary shoot meristem initiation	2.86E-04
17	GO:0016117: carotenoid biosynthetic process	3.49E-04
18	GO:0007231: osmosensory signaling pathway	4.15E-04
19	GO:0009855: determination of bilateral symmetry	4.15E-04
20	GO:0006633: fatty acid biosynthetic process	5.26E-04
21	GO:2000122: negative regulation of stomatal complex development	5.53E-04
22	GO:0033500: carbohydrate homeostasis	5.53E-04
23	GO:0006546: glycine catabolic process	5.53E-04
24	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	5.53E-04
25	GO:0010037: response to carbon dioxide	5.53E-04
26	GO:0015976: carbon utilization	5.53E-04
27	GO:0009765: photosynthesis, light harvesting	5.53E-04
28	GO:0016123: xanthophyll biosynthetic process	7.00E-04
29	GO:0044209: AMP salvage	7.00E-04
30	GO:0016120: carotene biosynthetic process	7.00E-04
31	GO:0016126: sterol biosynthetic process	7.13E-04
32	GO:0016554: cytidine to uridine editing	8.57E-04
33	GO:0010014: meristem initiation	1.02E-03
34	GO:0042372: phylloquinone biosynthetic process	1.02E-03
35	GO:0017148: negative regulation of translation	1.02E-03
36	GO:0009955: adaxial/abaxial pattern specification	1.02E-03
37	GO:0080060: integument development	1.02E-03
38	GO:0010067: procambium histogenesis	1.02E-03
39	GO:0048437: floral organ development	1.19E-03
40	GO:0009932: cell tip growth	1.56E-03
41	GO:0010206: photosystem II repair	1.76E-03
42	GO:0043067: regulation of programmed cell death	1.97E-03
43	GO:1900865: chloroplast RNA modification	1.97E-03
44	GO:0043069: negative regulation of programmed cell death	2.19E-03
45	GO:0019684: photosynthesis, light reaction	2.41E-03
46	GO:0010072: primary shoot apical meristem specification	2.41E-03
47	GO:0009089: lysine biosynthetic process via diaminopimelate	2.41E-03
48	GO:0048229: gametophyte development	2.41E-03
49	GO:0006816: calcium ion transport	2.41E-03
50	GO:0010075: regulation of meristem growth	2.88E-03
51	GO:0009725: response to hormone	2.88E-03
52	GO:0010223: secondary shoot formation	3.12E-03
53	GO:0009934: regulation of meristem structural organization	3.12E-03
54	GO:0048768: root hair cell tip growth	3.12E-03
55	GO:0070588: calcium ion transmembrane transport	3.37E-03
56	GO:0005985: sucrose metabolic process	3.37E-03
57	GO:0006636: unsaturated fatty acid biosynthetic process	3.63E-03
58	GO:0006071: glycerol metabolic process	3.63E-03
59	GO:0009944: polarity specification of adaxial/abaxial axis	3.89E-03
60	GO:0010026: trichome differentiation	4.17E-03
61	GO:0055114: oxidation-reduction process	4.71E-03
62	GO:0080092: regulation of pollen tube growth	4.73E-03
63	GO:0001944: vasculature development	5.02E-03
64	GO:0010089: xylem development	5.32E-03
65	GO:0080022: primary root development	5.93E-03
66	GO:0010087: phloem or xylem histogenesis	5.93E-03
67	GO:0048653: anther development	5.93E-03
68	GO:0010197: polar nucleus fusion	6.24E-03
69	GO:0010583: response to cyclopentenone	7.56E-03
70	GO:0016032: viral process	7.56E-03
71	GO:0007264: small GTPase mediated signal transduction	7.56E-03
72	GO:0009793: embryo development ending in seed dormancy	8.20E-03
73	GO:0016125: sterol metabolic process	8.25E-03
74	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.44E-03
75	GO:0009607: response to biotic stimulus	9.71E-03
76	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.71E-03
77	GO:0010411: xyloglucan metabolic process	1.05E-02
78	GO:0016311: dephosphorylation	1.09E-02
79	GO:0000160: phosphorelay signal transduction system	1.17E-02
80	GO:0030154: cell differentiation	1.22E-02
81	GO:0010119: regulation of stomatal movement	1.25E-02
82	GO:0006839: mitochondrial transport	1.46E-02
83	GO:0006631: fatty acid metabolic process	1.50E-02
84	GO:0009744: response to sucrose	1.59E-02
85	GO:0042546: cell wall biogenesis	1.64E-02
86	GO:0009736: cytokinin-activated signaling pathway	1.97E-02
87	GO:0048367: shoot system development	2.26E-02
88	GO:0051301: cell division	2.62E-02
89	GO:0055085: transmembrane transport	3.05E-02
90	GO:0007623: circadian rhythm	3.73E-02
91	GO:0045490: pectin catabolic process	3.73E-02
92	GO:0009617: response to bacterium	4.23E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
3	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
4	GO:0004496: mevalonate kinase activity	0.00E+00
5	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
6	GO:0004832: valine-tRNA ligase activity	7.07E-05
7	GO:0080132: fatty acid alpha-hydroxylase activity	7.07E-05
8	GO:0004831: tyrosine-tRNA ligase activity	7.07E-05
9	GO:0010313: phytochrome binding	7.07E-05
10	GO:0004001: adenosine kinase activity	7.07E-05
11	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.70E-04
12	GO:0042389: omega-3 fatty acid desaturase activity	1.70E-04
13	GO:0004047: aminomethyltransferase activity	1.70E-04
14	GO:0004817: cysteine-tRNA ligase activity	1.70E-04
15	GO:0033612: receptor serine/threonine kinase binding	2.46E-04
16	GO:0004075: biotin carboxylase activity	2.86E-04
17	GO:0003979: UDP-glucose 6-dehydrogenase activity	2.86E-04
18	GO:0004812: aminoacyl-tRNA ligase activity	3.49E-04
19	GO:0048027: mRNA 5'-UTR binding	4.15E-04
20	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.15E-04
21	GO:0016722: oxidoreductase activity, oxidizing metal ions	6.38E-04
22	GO:0003989: acetyl-CoA carboxylase activity	7.00E-04
23	GO:0016208: AMP binding	8.57E-04
24	GO:0008200: ion channel inhibitor activity	8.57E-04
25	GO:0005507: copper ion binding	1.35E-03
26	GO:0004564: beta-fructofuranosidase activity	1.37E-03
27	GO:0005544: calcium-dependent phospholipid binding	1.37E-03
28	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.56E-03
29	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.76E-03
30	GO:0004575: sucrose alpha-glucosidase activity	1.97E-03
31	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.41E-03
32	GO:0004089: carbonate dehydratase activity	2.88E-03
33	GO:0005262: calcium channel activity	2.88E-03
34	GO:0004565: beta-galactosidase activity	2.88E-03
35	GO:0030570: pectate lyase activity	5.02E-03
36	GO:0005102: receptor binding	5.62E-03
37	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.33E-03
38	GO:0004872: receptor activity	6.89E-03
39	GO:0016762: xyloglucan:xyloglucosyl transferase activity	7.22E-03
40	GO:0004518: nuclease activity	7.56E-03
41	GO:0000156: phosphorelay response regulator activity	7.90E-03
42	GO:0008483: transaminase activity	8.61E-03
43	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.05E-02
44	GO:0008236: serine-type peptidase activity	1.09E-02
45	GO:0003993: acid phosphatase activity	1.37E-02
46	GO:0043621: protein self-association	1.68E-02
47	GO:0003729: mRNA binding	1.81E-02
48	GO:0051287: NAD binding	1.82E-02
49	GO:0004650: polygalacturonase activity	2.37E-02
50	GO:0022857: transmembrane transporter activity	2.42E-02
51	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.02E-02
52	GO:0016829: lyase activity	3.14E-02
53	GO:0004252: serine-type endopeptidase activity	3.19E-02
54	GO:0042802: identical protein binding	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	3.66E-14
2	GO:0046658: anchored component of plasma membrane	1.75E-10
3	GO:0048046: apoplast	9.19E-07
4	GO:0009505: plant-type cell wall	1.61E-05
5	GO:0042170: plastid membrane	1.70E-04
6	GO:0005618: cell wall	3.63E-04
7	GO:0005775: vacuolar lumen	4.15E-04
8	GO:0009941: chloroplast envelope	5.35E-04
9	GO:0010168: ER body	8.57E-04
10	GO:0009507: chloroplast	8.91E-04
11	GO:0000325: plant-type vacuole	1.05E-03
12	GO:0009986: cell surface	1.19E-03
13	GO:0031977: thylakoid lumen	1.36E-03
14	GO:0005886: plasma membrane	1.65E-03
15	GO:0016324: apical plasma membrane	2.19E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	3.37E-03
17	GO:0009543: chloroplast thylakoid lumen	3.46E-03
18	GO:0009570: chloroplast stroma	3.79E-03
19	GO:0009506: plasmodesma	5.11E-03
20	GO:0005778: peroxisomal membrane	8.61E-03
21	GO:0005773: vacuole	8.65E-03
22	GO:0031969: chloroplast membrane	9.13E-03
23	GO:0015934: large ribosomal subunit	1.25E-02
24	GO:0005576: extracellular region	1.37E-02
25	GO:0031902: late endosome membrane	1.50E-02
26	GO:0009706: chloroplast inner membrane	2.53E-02
27	GO:0009579: thylakoid	2.87E-02
28	GO:0005615: extracellular space	4.04E-02
29	GO:0016020: membrane	4.17E-02